BLASTX 7.6.2
Query= UN14260 /QuerySize=941
(940 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G55940.1 | Symbols: emb2731 | emb2731 (embryo ... 397 8e-111
TAIR9_protein||AT5G51620.3 | Symbols: | FUNCTIONS IN: molecular... 102 5e-022
TAIR9_protein||AT5G51620.2 | Symbols: | FUNCTIONS IN: molecular... 73 3e-013
TAIR9_protein||AT5G51620.1 | Symbols: | FUNCTIONS IN: molecular... 73 3e-013
>TAIR9_protein||AT5G55940.1 | Symbols: emb2731 | emb2731 (embryo defective 2731)
| chr5:22656256-22657894 REVERSE
Length = 209
Score = 397 bits (1018), Expect = 8e-111
Identities = 197/208 (94%), Positives = 200/208 (96%)
Frame = -1
Query: 874 GMGGNGELKYEISQNAYIKLVLHSLRHKTAAVNGVLVGRISSKDEGVVEISDSVPLFHSN 695
GMG NGELKYEISQNAYIKLVLHSLRHKTAAVNGVLVGRIS KD+GVVEISDSVPLFHSN
Sbjct: 2 GMGSNGELKYEISQNAYIKLVLHSLRHKTAAVNGVLVGRISPKDDGVVEISDSVPLFHSN 61
Query: 694 LALLPPLEISLIMIEEHYVAQGLSIVGYFHANERFDDVELSGAAKNIGDHISRYFPQAPI 515
LALLPPLEISLIMIEEHYVAQGLSIVGYFHANERFDDVEL G AKNIGDHISRYFPQAPI
Sbjct: 62 LALLPPLEISLIMIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNIGDHISRYFPQAPI 121
Query: 514 LLLDNKKLEALSKGKDRSPVMQLCVKDASKNWRVVGTDGGSKLLLKEPSANVVLSDYISS 335
LLL+NKKLEALSKGK+RSPVMQLCVKDASKNWRVVG DGGSKLLLKEPSANVVLSDYISS
Sbjct: 122 LLLNNKKLEALSKGKERSPVMQLCVKDASKNWRVVGADGGSKLLLKEPSANVVLSDYISS 181
Query: 334 EKWKDVTDFDDHLDDVTKDWLNSGLFN* 251
EKWKDVTD DDHLDDVTKDWLN GLFN*
Sbjct: 182 EKWKDVTDVDDHLDDVTKDWLNPGLFN* 209
>TAIR9_protein||AT5G51620.3 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0172 (InterPro:IPR005366); BEST
Arabidopsis thaliana protein match is: emb2731 (embryo defective 2731)
(TAIR:AT5G55940.1); Has 23 Blast hits to 23 proteins in 7 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr5:20967172-20967959 FORWARD
Length = 53
Score = 102 bits (252), Expect = 5e-022
Identities = 48/50 (96%)
Frame = -1
Query: 658 MIEEHYVAQGLSIVGYFHANERFDDVELSGAAKNIGDHISRYFPQAPILL 509
MIEEHYVAQGLSIVGYFHANERFDDVEL G AKNIGDHISRYFPQAPILL
Sbjct: 1 MIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNIGDHISRYFPQAPILL 50
>TAIR9_protein||AT5G51620.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0172 (InterPro:IPR005366); BEST
Arabidopsis thaliana protein match is: emb2731 (embryo defective 2731)
(TAIR:AT5G55940.1); Has 28 Blast hits to 28 proteins in 6 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr5:20967172-20967984 FORWARD
Length = 69
Score = 73 bits (177), Expect = 3e-013
Identities = 34/36 (94%)
Frame = -1
Query: 658 MIEEHYVAQGLSIVGYFHANERFDDVELSGAAKNIG 551
MIEEHYVAQGLSIVGYFHANERFDDVEL G AKNIG
Sbjct: 1 MIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNIG 36
>TAIR9_protein||AT5G51620.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0172 (InterPro:IPR005366); BEST
Arabidopsis thaliana protein match is: emb2731 (embryo defective 2731)
(TAIR:AT5G55940.1); Has 22 Blast hits to 22 proteins in 6 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr5:20967172-20967741 FORWARD
Length = 51
Score = 73 bits (177), Expect = 3e-013
Identities = 34/36 (94%)
Frame = -1
Query: 658 MIEEHYVAQGLSIVGYFHANERFDDVELSGAAKNIG 551
MIEEHYVAQGLSIVGYFHANERFDDVEL G AKNIG
Sbjct: 1 MIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNIG 36
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,473,873,593
Number of Sequences: 33410
Number of Extensions: 7473873593
Number of Successful Extensions: 254010249
Number of sequences better than 0.0: 0
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