BLASTX 7.6.2
Query= UN14280 /QuerySize=1184
(1183 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297803572|ref|XP_002869670.1| hypothetical protein ARALYDRAFT... 252 1e-064
gi|15235112|ref|NP_194280.1| arginine/serine-rich-splicing facto... 250 4e-064
gi|42573039|ref|NP_974616.1| arginine/serine-rich-splicing facto... 250 4e-064
gi|7269400|emb|CAB81360.1| splicing factor At-SRp40 [Arabidopsis... 250 4e-064
gi|145334133|ref|NP_001078447.1| arginine/serine-rich-splicing f... 250 4e-064
gi|222424234|dbj|BAH20075.1| AT4G25500 [Arabidopsis thaliana] 250 4e-064
gi|1667582|gb|AAB18813.1| splicing factor At-SRp40 [Arabidopsis ... 249 1e-063
gi|30696138|ref|NP_851174.1| arginine/serine-rich-splicing facto... 206 7e-051
gi|30696140|ref|NP_200017.2| arginine/serine-rich-splicing facto... 206 7e-051
gi|1707370|emb|CAA67799.1| splicing factor [Arabidopsis thaliana] 205 2e-050
gi|297792527|ref|XP_002864148.1| hypothetical protein ARALYDRAFT... 204 4e-050
gi|41323931|gb|AAS00039.1| splicing factor-like protein [Vitis r... 199 9e-049
gi|147863191|emb|CAN82624.1| hypothetical protein VITISV_021436 ... 199 1e-048
gi|225455461|ref|XP_002279907.1| PREDICTED: similar to splicing ... 199 1e-048
gi|227206136|dbj|BAH57123.1| AT5G52040 [Arabidopsis thaliana] 186 1e-044
gi|238481544|ref|NP_001154773.1| arginine/serine-rich-splicing f... 186 1e-044
>gi|297803572|ref|XP_002869670.1| hypothetical protein ARALYDRAFT_492278
[Arabidopsis lyrata subsp. lyrata]
Length = 348
Score = 252 bits (642), Expect = 1e-064
Identities = 124/151 (82%), Positives = 137/151 (90%), Gaps = 4/151 (2%)
Frame = +3
Query: 555 ERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRD 734
ERRRRSPSPYKRERGSPDYGRG SPVAAY+++RTSPDYGRRRSPSPYK++R SPEYGRD
Sbjct: 188 ERRRRSPSPYKRERGSPDYGRGASPVAAYRKDRTSPDYGRRRSPSPYKKSRCGSPEYGRD 247
Query: 735 HRHRGNESPRRRERVASPRYSRSPDNKRERVSPDRSPFKKESLKNGDGEVDSP--RRERS 908
RGN+SPRRRERVASP+YSRSP+NKRER+SP+ SPFKKES +NG GEVDSP RRERS
Sbjct: 248 --RRGNDSPRRRERVASPKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVDSPIVRRERS 305
Query: 909 RSSFENGQVESPGSIGRRDSDGGYDGQIAPL 1001
RSS ENGQVESPGSIGRRDSDGGYDG +P+
Sbjct: 306 RSSPENGQVESPGSIGRRDSDGGYDGAESPM 336
Score = 191 bits (485), Expect = 2e-046
Identities = 143/319 (44%), Positives = 176/319 (55%), Gaps = 23/319 (7%)
Frame = +3
Query: 69 NFEYDAREGDLERLFRKYGRVERVI*KLGLLSCTWK-MRGC*RCNPST*PH*IWTQGTQT 245
NFEYDAREGDLERLFRKYG+VERV K G + R + +G +
Sbjct: 8 NFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRIEFGRKGRRL 67
Query: 246 PC*VDKG*AWRR*KIWWWWWFKEILILEAFQDSVCDKLDADNTRTRDLERHFEPYGKIVN 425
K + + + + DADNTRTRDLERHFEPYGKI+N
Sbjct: 68 RVEWTKS-EREGDRRSGGGSRRSSSGMRPSKTLFVINFDADNTRTRDLERHFEPYGKILN 126
Query: 426 VRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVEYAMK-DERRRRSPSPYKRERGS 602
VRIRRNFAF+QYE QEDATRAL+ATNNSKLMDKVI VEYA+K D+ R SP +R S
Sbjct: 127 VRIRRNFAFIQYEAQEDATRALDATNNSKLMDKVISVEYAVKDDDARGNGHSPERRRDRS 186
Query: 603 PDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNESPRRRERVA 782
P+ R SP + YKRER SPDYGR SP R R+SP+YGR R + SP ++ R
Sbjct: 187 PE-RRRRSP-SPYKRERGSPDYGRGASPVAAYRKDRTSPDYGR----RRSPSPYKKSRCG 240
Query: 783 SPRYSR-----SPDNKRERVSP---DRSPFKKESLKNGDGEVDSP-RRERSRSSFENGQV 935
SP Y R +RERV+ RSP K + + SP ++E R+ G+V
Sbjct: 241 SPEYGRDRRGNDSPRRRERVASPKYSRSPNNKRERMSPN---HSPFKKESPRNGV--GEV 295
Query: 936 ESPGSIGRRDSDGGYDGQI 992
+SP R +GQ+
Sbjct: 296 DSPIVRRERSRSSPENGQV 314
>gi|15235112|ref|NP_194280.1| arginine/serine-rich-splicing factor RSP40
[Arabidopsis thaliana]
Length = 350
Score = 250 bits (637), Expect = 4e-064
Identities = 125/152 (82%), Positives = 138/152 (90%), Gaps = 5/152 (3%)
Frame = +3
Query: 555 ERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRD 734
ERRRRSPSPYKRERGSPDYGRG SPVAAY++ERTSPDYGRRRSPSPYK++RR SPEYGRD
Sbjct: 188 ERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRD 247
Query: 735 HRHRGNESPRRRERVASP-RYSRSPDNKRERVSPDRSPFKKESLKNGDGEVDSP--RRER 905
RGN+SPRRRERVASP +YSRSP+NKRER+SP+ SPFKKES +NG GEV+SP RRER
Sbjct: 248 --RRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVESPIERRER 305
Query: 906 SRSSFENGQVESPGSIGRRDSDGGYDGQIAPL 1001
SRSS ENGQVESPGSIGRRDSDGGYDG +P+
Sbjct: 306 SRSSPENGQVESPGSIGRRDSDGGYDGAESPM 337
Score = 197 bits (499), Expect = 4e-048
Identities = 145/325 (44%), Positives = 176/325 (54%), Gaps = 34/325 (10%)
Frame = +3
Query: 69 NFEYDAREGDLERLFRKYGRVERVI*KLGLLSCTWK-MRGC*RCNPST*PH*IWTQGTQT 245
NFEYDAREGDLERLFRKYG+VERV K G + R + +G +
Sbjct: 8 NFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEFGRKGRRL 67
Query: 246 PC*VDKG*AWRR-----*KIWWWWWFKEILILEAFQDSVCDKLDADNTRTRDLERHFEPY 410
W + K + + + DADNTRTRDLE+HFEPY
Sbjct: 68 RV------EWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEPY 121
Query: 411 GKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVEYAMK-DERRRRSPSPYK 587
GKIVNVRIRRNFAF+QYE QEDATRAL+A+NNSKLMDKVI VEYA+K D+ R SP +
Sbjct: 122 GKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPER 181
Query: 588 RERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNESPRR 767
R SP+ R SP + YKRER SPDYGR SP R R+SP+YGR R + SP +
Sbjct: 182 RRDRSPE-RRRRSP-SPYKRERGSPDYGRGASPVAAYRKERTSPDYGR----RRSPSPYK 235
Query: 768 RERVASPRYSR-----SPDNKRERVSPDRSPFKKESLKNGDGEVDSP-----RRERSRSS 917
+ R SP Y R +RERV+ SP K N E SP ++E R+
Sbjct: 236 KSRRGSPEYGRDRRGNDSPRRRERVA---SPTKYSRSPNNKRERMSPNHSPFKKESPRNG 292
Query: 918 FENGQVESPGSIGRRDSDGGYDGQI 992
G+VESP R +GQ+
Sbjct: 293 V--GEVESPIERRERSRSSPENGQV 315
>gi|42573039|ref|NP_974616.1| arginine/serine-rich-splicing factor RSP40
[Arabidopsis thaliana]
Length = 309
Score = 250 bits (637), Expect = 4e-064
Identities = 125/152 (82%), Positives = 138/152 (90%), Gaps = 5/152 (3%)
Frame = +3
Query: 555 ERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRD 734
ERRRRSPSPYKRERGSPDYGRG SPVAAY++ERTSPDYGRRRSPSPYK++RR SPEYGRD
Sbjct: 147 ERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRD 206
Query: 735 HRHRGNESPRRRERVASP-RYSRSPDNKRERVSPDRSPFKKESLKNGDGEVDSP--RRER 905
RGN+SPRRRERVASP +YSRSP+NKRER+SP+ SPFKKES +NG GEV+SP RRER
Sbjct: 207 --RRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVESPIERRER 264
Query: 906 SRSSFENGQVESPGSIGRRDSDGGYDGQIAPL 1001
SRSS ENGQVESPGSIGRRDSDGGYDG +P+
Sbjct: 265 SRSSPENGQVESPGSIGRRDSDGGYDGAESPM 296
>gi|7269400|emb|CAB81360.1| splicing factor At-SRp40 [Arabidopsis thaliana]
Length = 349
Score = 250 bits (637), Expect = 4e-064
Identities = 125/152 (82%), Positives = 138/152 (90%), Gaps = 5/152 (3%)
Frame = +3
Query: 555 ERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRD 734
ERRRRSPSPYKRERGSPDYGRG SPVAAY++ERTSPDYGRRRSPSPYK++RR SPEYGRD
Sbjct: 187 ERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRD 246
Query: 735 HRHRGNESPRRRERVASP-RYSRSPDNKRERVSPDRSPFKKESLKNGDGEVDSP--RRER 905
RGN+SPRRRERVASP +YSRSP+NKRER+SP+ SPFKKES +NG GEV+SP RRER
Sbjct: 247 --RRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVESPIERRER 304
Query: 906 SRSSFENGQVESPGSIGRRDSDGGYDGQIAPL 1001
SRSS ENGQVESPGSIGRRDSDGGYDG +P+
Sbjct: 305 SRSSPENGQVESPGSIGRRDSDGGYDGAESPM 336
Score = 197 bits (500), Expect = 3e-048
Identities = 145/320 (45%), Positives = 175/320 (54%), Gaps = 24/320 (7%)
Frame = +3
Query: 69 NFEYDAREGDLERLFRKYGRVERVI*KLGLLSCTWK-MRGC*RCNPST*PH*IWTQGTQT 245
NFEYDAREGDLERLFRKYG+VERV K G + R + +G +
Sbjct: 7 NFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEFGRKGRRL 66
Query: 246 PC*VDKG*AWRR*KIWWWWWFKEILILEAFQDSVCDKLDADNTRTRDLERHFEPYGKIVN 425
KG K + + + DADNTRTRDLE+HFEPYGKIVN
Sbjct: 67 RVEWTKGERGGD-KRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEPYGKIVN 125
Query: 426 VRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVEYAMK-DERRRRSPSPYKRERGS 602
VRIRRNFAF+QYE QEDATRAL+A+NN KLMDKVI VEYA+K D+ R SP +R S
Sbjct: 126 VRIRRNFAFIQYEAQEDATRALDASNNRKLMDKVISVEYAVKDDDARGNGHSPERRRDRS 185
Query: 603 PDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNESPRRRERVA 782
P+ R SP + YKRER SPDYGR SP R R+SP+YGR R + SP ++ R
Sbjct: 186 PE-RRRRSP-SPYKRERGSPDYGRGASPVAAYRKERTSPDYGR----RRSPSPYKKSRRG 239
Query: 783 SPRYSR-----SPDNKRERVSPDRSPFKKESLKNGDGEVDSP-----RRERSRSSFENGQ 932
SP Y R +RERV+ SP K N E SP ++E R+ G+
Sbjct: 240 SPEYGRDRRGNDSPRRRERVA---SPTKYSRSPNNKRERMSPNHSPFKKESPRNGV--GE 294
Query: 933 VESPGSIGRRDSDGGYDGQI 992
VESP R +GQ+
Sbjct: 295 VESPIERRERSRSSPENGQV 314
>gi|145334133|ref|NP_001078447.1| arginine/serine-rich-splicing factor RSP40
[Arabidopsis thaliana]
Length = 317
Score = 250 bits (637), Expect = 4e-064
Identities = 125/152 (82%), Positives = 138/152 (90%), Gaps = 5/152 (3%)
Frame = +3
Query: 555 ERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRD 734
ERRRRSPSPYKRERGSPDYGRG SPVAAY++ERTSPDYGRRRSPSPYK++RR SPEYGRD
Sbjct: 155 ERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRD 214
Query: 735 HRHRGNESPRRRERVASP-RYSRSPDNKRERVSPDRSPFKKESLKNGDGEVDSP--RRER 905
RGN+SPRRRERVASP +YSRSP+NKRER+SP+ SPFKKES +NG GEV+SP RRER
Sbjct: 215 --RRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVESPIERRER 272
Query: 906 SRSSFENGQVESPGSIGRRDSDGGYDGQIAPL 1001
SRSS ENGQVESPGSIGRRDSDGGYDG +P+
Sbjct: 273 SRSSPENGQVESPGSIGRRDSDGGYDGAESPM 304
>gi|222424234|dbj|BAH20075.1| AT4G25500 [Arabidopsis thaliana]
Length = 317
Score = 250 bits (637), Expect = 4e-064
Identities = 125/152 (82%), Positives = 138/152 (90%), Gaps = 5/152 (3%)
Frame = +3
Query: 555 ERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRD 734
ERRRRSPSPYKRERGSPDYGRG SPVAAY++ERTSPDYGRRRSPSPYK++RR SPEYGRD
Sbjct: 155 ERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRD 214
Query: 735 HRHRGNESPRRRERVASP-RYSRSPDNKRERVSPDRSPFKKESLKNGDGEVDSP--RRER 905
RGN+SPRRRERVASP +YSRSP+NKRER+SP+ SPFKKES +NG GEV+SP RRER
Sbjct: 215 --RRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVESPIERRER 272
Query: 906 SRSSFENGQVESPGSIGRRDSDGGYDGQIAPL 1001
SRSS ENGQVESPGSIGRRDSDGGYDG +P+
Sbjct: 273 SRSSPENGQVESPGSIGRRDSDGGYDGAESPM 304
>gi|1667582|gb|AAB18813.1| splicing factor At-SRp40 [Arabidopsis thaliana]
Length = 350
Score = 249 bits (634), Expect = 1e-063
Identities = 124/152 (81%), Positives = 138/152 (90%), Gaps = 5/152 (3%)
Frame = +3
Query: 555 ERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRD 734
ERRRRSP+PYKRERGSPDYGRG SPVAAY++ERTSPDYGRRRSPSPYK++RR SPEYGRD
Sbjct: 188 ERRRRSPTPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRD 247
Query: 735 HRHRGNESPRRRERVASP-RYSRSPDNKRERVSPDRSPFKKESLKNGDGEVDSP--RRER 905
RGN+SPRRRERVASP +YSRSP+NKRER+SP+ SPFKKES +NG GEV+SP RRER
Sbjct: 248 --RRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVESPIERRER 305
Query: 906 SRSSFENGQVESPGSIGRRDSDGGYDGQIAPL 1001
SRSS ENGQVESPGSIGRRDSDGGYDG +P+
Sbjct: 306 SRSSPENGQVESPGSIGRRDSDGGYDGAESPM 337
Score = 197 bits (499), Expect = 4e-048
Identities = 146/325 (44%), Positives = 174/325 (53%), Gaps = 34/325 (10%)
Frame = +3
Query: 69 NFEYDAREGDLERLFRKYGRVERVI*KLGLLSCTWK-MRGC*RCNPST*PH*IWTQGTQT 245
NFEYDAREGDLERLFRKYGRVERV K G + R + +G
Sbjct: 8 NFEYDAREGDLERLFRKYGRVERVDMKAGFAFVYMEDERDAEDAIRALDRFEFGRRGRTL 67
Query: 246 PC*VDKG*AWRR-----*KIWWWWWFKEILILEAFQDSVCDKLDADNTRTRDLERHFEPY 410
W + K + + + DADNTRTRDLE+HFEPY
Sbjct: 68 RV------EWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEPY 121
Query: 411 GKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVEYAMK-DERRRRSPSPYK 587
GKIVNVRIRRNFAF+QYE QEDATRAL+A+NNSKLMDKVI VEYA+K D+ R SP +
Sbjct: 122 GKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPER 181
Query: 588 RERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNESPRR 767
R SP+ R SP YKRER SPDYGR SP R R+SP+YGR R + SP +
Sbjct: 182 RRDRSPE-RRRRSP-TPYKRERGSPDYGRGASPVAAYRKERTSPDYGR----RRSPSPYK 235
Query: 768 RERVASPRYSR-----SPDNKRERVSPDRSPFKKESLKNGDGEVDSP-----RRERSRSS 917
+ R SP Y R +RERV+ SP K N E SP ++E R+
Sbjct: 236 KSRRGSPEYGRDRRGNDSPRRRERVA---SPTKYSRSPNNKRERMSPNHSPFKKESPRNG 292
Query: 918 FENGQVESPGSIGRRDSDGGYDGQI 992
G+VESP R +GQ+
Sbjct: 293 V--GEVESPIERRERSRSSPENGQV 315
>gi|30696138|ref|NP_851174.1| arginine/serine-rich-splicing factor RSP41
[Arabidopsis thaliana]
Length = 356
Score = 206 bits (523), Expect = 7e-051
Identities = 146/296 (49%), Positives = 174/296 (58%), Gaps = 31/296 (10%)
Frame = +3
Query: 69 NFEYDAREGDLERLFRKYGRVERVI*KLGLLSCTWK--------MRGC*RCNPST*PH*I 224
NFEYDARE DLERLFRKYG+VERV K G + +R R +
Sbjct: 8 NFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEYGRTGRRL 67
Query: 225 WTQGTQTPC*VDKG*AWRR*KIWWWWWFKEILILEAFQDSVCDKLDADNTRTRDLERHFE 404
+ T+ D+G A R + L + DA NTRTRDLERHFE
Sbjct: 68 RVEWTKN----DRGGAGRS-----GGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFE 118
Query: 405 PYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVEYAMK-DERRRRSPSP 581
PYGKIVNVRIRRNFAF+QYE QEDATRAL+ATN+SKLMDKVI VEYA+K D+ R SP
Sbjct: 119 PYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSP 178
Query: 582 YKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNESP 761
+R SPD R SP + Y+RER SPDYGR SP +KR R+SP+YGR R + SP
Sbjct: 179 ERRRDRSPD-RRRRSP-SPYRRERGSPDYGRGASPVAHKR-ERTSPDYGRGRR---SPSP 232
Query: 762 RRRERVASPRYSRSPDNKRERV-SPDRSPFKKESLKNGDGEVDSP----RRERSRS 914
+R R+ SP Y R D +RERV SP+ + S + G GE SP +R SRS
Sbjct: 233 YKRARL-SPDYKRD-DRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRS 286
>gi|30696140|ref|NP_200017.2| arginine/serine-rich-splicing factor RSP41
[Arabidopsis thaliana]
Length = 357
Score = 206 bits (523), Expect = 7e-051
Identities = 146/296 (49%), Positives = 174/296 (58%), Gaps = 31/296 (10%)
Frame = +3
Query: 69 NFEYDAREGDLERLFRKYGRVERVI*KLGLLSCTWK--------MRGC*RCNPST*PH*I 224
NFEYDARE DLERLFRKYG+VERV K G + +R R +
Sbjct: 8 NFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEYGRTGRRL 67
Query: 225 WTQGTQTPC*VDKG*AWRR*KIWWWWWFKEILILEAFQDSVCDKLDADNTRTRDLERHFE 404
+ T+ D+G A R + L + DA NTRTRDLERHFE
Sbjct: 68 RVEWTKN----DRGGAGRS-----GGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFE 118
Query: 405 PYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVEYAMK-DERRRRSPSP 581
PYGKIVNVRIRRNFAF+QYE QEDATRAL+ATN+SKLMDKVI VEYA+K D+ R SP
Sbjct: 119 PYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSP 178
Query: 582 YKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNESP 761
+R SPD R SP + Y+RER SPDYGR SP +KR R+SP+YGR R + SP
Sbjct: 179 ERRRDRSPD-RRRRSP-SPYRRERGSPDYGRGASPVAHKR-ERTSPDYGRGRR---SPSP 232
Query: 762 RRRERVASPRYSRSPDNKRERV-SPDRSPFKKESLKNGDGEVDSP----RRERSRS 914
+R R+ SP Y R D +RERV SP+ + S + G GE SP +R SRS
Sbjct: 233 YKRARL-SPDYKRD-DRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRS 286
>gi|1707370|emb|CAA67799.1| splicing factor [Arabidopsis thaliana]
Length = 356
Score = 205 bits (520), Expect = 2e-050
Identities = 145/296 (48%), Positives = 174/296 (58%), Gaps = 31/296 (10%)
Frame = +3
Query: 69 NFEYDAREGDLERLFRKYGRVERVI*KLGLLSCTWK--------MRGC*RCNPST*PH*I 224
NFEYDARE DLERLFRKYG+VERV K G + +R R +
Sbjct: 8 NFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEYGRTGRRL 67
Query: 225 WTQGTQTPC*VDKG*AWRR*KIWWWWWFKEILILEAFQDSVCDKLDADNTRTRDLERHFE 404
+ T+ D+G A R + L + DA NTRTRDLERHFE
Sbjct: 68 RVEWTKN----DRGGAGRS-----GGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFE 118
Query: 405 PYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVEYAMK-DERRRRSPSP 581
PYGKIVNVRIRRN+AF+QYE QEDATRAL+ATN+SKLMDKVI VEYA+K D+ R SP
Sbjct: 119 PYGKIVNVRIRRNYAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSP 178
Query: 582 YKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNESP 761
+R SPD R SP + Y+RER SPDYGR SP +KR R+SP+YGR R + SP
Sbjct: 179 ERRRDRSPD-RRRRSP-SPYRRERGSPDYGRGASPVAHKR-ERTSPDYGRGRR---SPSP 232
Query: 762 RRRERVASPRYSRSPDNKRERV-SPDRSPFKKESLKNGDGEVDSP----RRERSRS 914
+R R+ SP Y R D +RERV SP+ + S + G GE SP +R SRS
Sbjct: 233 YKRARL-SPDYKRD-DRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRS 286
>gi|297792527|ref|XP_002864148.1| hypothetical protein ARALYDRAFT_495275
[Arabidopsis lyrata subsp. lyrata]
Length = 357
Score = 204 bits (517), Expect = 4e-050
Identities = 145/300 (48%), Positives = 176/300 (58%), Gaps = 39/300 (13%)
Frame = +3
Query: 69 NFEYDAREGDLERLFRKYGRVERVI*KLGLLSCTWK--------MRGC*RCNPST*PH*I 224
NFEYDARE DLERLF++YG+VERV K G + +R R +
Sbjct: 8 NFEYDARESDLERLFKRYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEYGRTGRRL 67
Query: 225 WTQGTQTPC*VDKG*AWR----R*KIWWWWWFKEILILEAFQDSVCDKLDADNTRTRDLE 392
+ T+ D+G A R R K + ++ DA NTRTRDLE
Sbjct: 68 RVEWTKN----DRGGAGRSGGSRRSSSGMRPSKTLFVI---------NFDAQNTRTRDLE 114
Query: 393 RHFEPYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVEYAMK-DERRRR 569
RHFEPYGKIVNVRIRRNFAF+QYE QEDATRAL+ATN+SKLMDKVI VEYA+K D+ R
Sbjct: 115 RHFEPYGKIVNVRIRRNFAFIQYESQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGN 174
Query: 570 SPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRG 749
SP +R SPD R SP + Y+RER SPDYGR SP +KR R+SP+YGR R
Sbjct: 175 GYSPERRRDRSPD-RRRRSP-SPYRRERGSPDYGRGASPVAHKR-ERTSPDYGRGRR--- 228
Query: 750 NESPRRRERVASPRYSRSPDNKRERV-SPDRSPFKKESLKNGDGEVDSP----RRERSRS 914
+ SP +R R+ SP Y R D +RERV SP+ + S + G GE SP +R SRS
Sbjct: 229 SPSPYKRARL-SPDYKRD-DRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRS 286
>gi|41323931|gb|AAS00039.1| splicing factor-like protein [Vitis riparia]
Length = 478
Score = 199 bits (505), Expect = 9e-049
Identities = 136/313 (43%), Positives = 177/313 (56%), Gaps = 48/313 (15%)
Frame = +3
Query: 69 NFEYDAREGDLERLFRKYGRVERVI*KLGLLSCTWK--------MRGC*RCNPST*PH*I 224
NF+YDAR+ DLERLFR+YG+V+RV K G + +RG R +
Sbjct: 8 NFDYDARQSDLERLFRRYGKVDRVDMKTGFAFIYMEDERDAEDAIRGLDRTGFGRKGRRL 67
Query: 225 WTQGTQTPC*VDKG*AWRR*KIWWWWWFKEILILEAFQDSVCDKLDADNTRTRDLERHFE 404
+ T+ + + RR L + D NTRTRDLERHF+
Sbjct: 68 RVEWTKQERGIRRPSGSRR----------SSTNLRPAKTLFVINFDPYNTRTRDLERHFD 117
Query: 405 PYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVEYAMKDERRRR---SP 575
PYGKI+N+RIRRNFAF+QYE QEDATRALEATN SKLMD+VI VEYA++D+ RR SP
Sbjct: 118 PYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKLMDRVISVEYAVRDDDERRNGYSP 177
Query: 576 SPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNE 755
+R++ S G ++ Y+RER SPDYGR SPS Y+R R+SP+YGRD +
Sbjct: 178 DGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRGSSPSAYRR-ERASPDYGRD----PSP 232
Query: 756 SPRRRERVASPRY--SRSPD-NKRERVS------PDRSPFKKESLKNGDGEVDSPRRERS 908
SPRRR+R A P + SRSP ++RER S P RSP++ E R +R+
Sbjct: 233 SPRRRDR-AMPDHGRSRSPSHHRRERTSHDSARGPSRSPYRSE------------RSDRA 279
Query: 909 RSSFENGQVESPG 947
+ G+ SPG
Sbjct: 280 IPDYGRGRSPSPG 292
>gi|147863191|emb|CAN82624.1| hypothetical protein VITISV_021436 [Vitis
vinifera]
Length = 479
Score = 199 bits (504), Expect = 1e-048
Identities = 134/312 (42%), Positives = 175/312 (56%), Gaps = 46/312 (14%)
Frame = +3
Query: 69 NFEYDAREGDLERLFRKYGRVERVI*KLGLLSCTWK--------MRGC*RCNPST*PH*I 224
NF+YDAR+ DLERLFR+YG+V+RV K G + +RG R +
Sbjct: 8 NFDYDARQSDLERLFRRYGKVDRVDMKTGFAFIYMEDERDAEDAIRGLDRTGFGRKGRRL 67
Query: 225 WTQGTQTPC*VDKG*AWRR*KIWWWWWFKEILILEAFQDSVCDKLDADNTRTRDLERHFE 404
+ T+ + + RR L + D NTRTRDLERHF+
Sbjct: 68 RVEWTKQERGIRRPSGSRR----------SSTNLRPAKTLFVINFDPYNTRTRDLERHFD 117
Query: 405 PYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVEYAMKDERRRR---SP 575
PYGKI+N+RIRRNFAF+QYE QEDATRALEATN SKLMD+VI VEYA++D+ RR SP
Sbjct: 118 PYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKLMDRVISVEYAVRDDDERRNGYSP 177
Query: 576 SPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNE 755
+R++ S G ++ Y+RER SPDYGR SPS Y+R R+SP+YGRD +
Sbjct: 178 DGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRGSSPSAYRR-ERASPDYGRD----PSP 232
Query: 756 SPRRRER-VASPRYSRSPD-NKRERVS------PDRSPFKKESLKNGDGEVDSPRRERSR 911
SPRRR+R + SRSP ++RER S P RSP++ E R +R+
Sbjct: 233 SPRRRDRAIPDHGRSRSPSHHRRERTSHDSARGPSRSPYRSE------------RSDRAI 280
Query: 912 SSFENGQVESPG 947
+ G+ SPG
Sbjct: 281 PDYGRGRSPSPG 292
>gi|225455461|ref|XP_002279907.1| PREDICTED: similar to splicing factor-like
protein [Vitis vinifera]
Length = 478
Score = 199 bits (504), Expect = 1e-048
Identities = 134/312 (42%), Positives = 175/312 (56%), Gaps = 46/312 (14%)
Frame = +3
Query: 69 NFEYDAREGDLERLFRKYGRVERVI*KLGLLSCTWK--------MRGC*RCNPST*PH*I 224
NF+YDAR+ DLERLFR+YG+V+RV K G + +RG R +
Sbjct: 8 NFDYDARQSDLERLFRRYGKVDRVDMKTGFAFIYMEDERDAEDAIRGLDRTGFGRKGRRL 67
Query: 225 WTQGTQTPC*VDKG*AWRR*KIWWWWWFKEILILEAFQDSVCDKLDADNTRTRDLERHFE 404
+ T+ + + RR L + D NTRTRDLERHF+
Sbjct: 68 RVEWTKQERGIRRPSGSRR----------SSTNLRPAKTLFVINFDPYNTRTRDLERHFD 117
Query: 405 PYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVEYAMKDERRRR---SP 575
PYGKI+N+RIRRNFAF+QYE QEDATRALEATN SKLMD+VI VEYA++D+ RR SP
Sbjct: 118 PYGKILNIRIRRNFAFIQYESQEDATRALEATNMSKLMDRVISVEYAVRDDDERRNGYSP 177
Query: 576 SPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNE 755
+R++ S G ++ Y+RER SPDYGR SPS Y+R R+SP+YGRD +
Sbjct: 178 DGRRRDKSSERSYDKGRSLSPYRRERGSPDYGRGSSPSAYRR-ERASPDYGRD----PSP 232
Query: 756 SPRRRER-VASPRYSRSPD-NKRERVS------PDRSPFKKESLKNGDGEVDSPRRERSR 911
SPRRR+R + SRSP ++RER S P RSP++ E R +R+
Sbjct: 233 SPRRRDRAIPDHGRSRSPSHHRRERTSHDSARGPSRSPYRSE------------RSDRAI 280
Query: 912 SSFENGQVESPG 947
+ G+ SPG
Sbjct: 281 PDYGRGRSPSPG 292
>gi|227206136|dbj|BAH57123.1| AT5G52040 [Arabidopsis thaliana]
Length = 323
Score = 186 bits (470), Expect = 1e-044
Identities = 114/191 (59%), Positives = 133/191 (69%), Gaps = 14/191 (7%)
Frame = +3
Query: 360 DADNTRTRDLERHFEPYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVE 539
DA NTRTRDLERHFEPYGKIVNVRIRRNFAF+QYE QEDATRAL+ATN+SKLMDKVI VE
Sbjct: 71 DAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVE 130
Query: 540 YAMK-DERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSS 716
YA+K D+ R SP +R SPD R SP + Y+RER SPDYGR SP +KR R+S
Sbjct: 131 YAVKDDDSRGNGYSPERRRDRSPD-RRRRSP-SPYRRERGSPDYGRGASPVAHKR-ERTS 187
Query: 717 PEYGRDHRHRGNESPRRRERVASPRYSRSPDNKRERV-SPDRSPFKKESLKNGDGEVDSP 893
P+YGR R + SP +R R+ SP Y R D +RERV SP+ + S + G GE SP
Sbjct: 188 PDYGRGRR---SPSPYKRARL-SPDYKRD-DRRRERVASPENGAVRNRSPRKGRGESRSP 242
Query: 894 ----RRERSRS 914
+R SRS
Sbjct: 243 PPYEKRRESRS 253
>gi|238481544|ref|NP_001154773.1| arginine/serine-rich-splicing factor RSP41
[Arabidopsis thaliana]
Length = 329
Score = 186 bits (470), Expect = 1e-044
Identities = 114/191 (59%), Positives = 133/191 (69%), Gaps = 14/191 (7%)
Frame = +3
Query: 360 DADNTRTRDLERHFEPYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVE 539
DA NTRTRDLERHFEPYGKIVNVRIRRNFAF+QYE QEDATRAL+ATN+SKLMDKVI VE
Sbjct: 77 DAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVE 136
Query: 540 YAMK-DERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSS 716
YA+K D+ R SP +R SPD R SP + Y+RER SPDYGR SP +KR R+S
Sbjct: 137 YAVKDDDSRGNGYSPERRRDRSPD-RRRRSP-SPYRRERGSPDYGRGASPVAHKR-ERTS 193
Query: 717 PEYGRDHRHRGNESPRRRERVASPRYSRSPDNKRERV-SPDRSPFKKESLKNGDGEVDSP 893
P+YGR R + SP +R R+ SP Y R D +RERV SP+ + S + G GE SP
Sbjct: 194 PDYGRGRR---SPSPYKRARL-SPDYKRD-DRRRERVASPENGAVRNRSPRKGRGESRSP 248
Query: 894 ----RRERSRS 914
+R SRS
Sbjct: 249 PPYEKRRESRS 259
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,687,995,622,555
Number of Sequences: 15229318
Number of Extensions: 1687995622555
Number of Successful Extensions: 433925934
Number of sequences better than 0.0: 0
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