BLASTX 7.6.2
Query= UN14280 /QuerySize=1184
(1183 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G25500.1 | Symbols: ATRSP35, ATRSP40, AT-SRP40... 250 2e-066
TAIR9_protein||AT4G25500.2 | Symbols: ATRSP35, ATRSP40, AT-SRP40... 250 2e-066
TAIR9_protein||AT4G25500.3 | Symbols: ATRSP35, ATRSP40, AT-SRP40... 250 2e-066
TAIR9_protein||AT5G52040.1 | Symbols: ATRSP41 | ATRSP41; RNA bin... 206 3e-053
TAIR9_protein||AT5G52040.2 | Symbols: ATRSP41 | ATRSP41; RNA bin... 206 3e-053
TAIR9_protein||AT5G52040.3 | Symbols: | ATRSP41; RNA binding / ... 186 4e-047
TAIR9_protein||AT5G52040.4 | Symbols: | ATRSP41; RNA binding / ... 186 4e-047
TAIR9_protein||AT2G46610.1 | Symbols: | arginine/serine-rich sp... 157 1e-038
TAIR9_protein||AT2G46610.2 | Symbols: | arginine/serine-rich sp... 148 9e-036
TAIR9_protein||AT3G61860.1 | Symbols: ATRSP31, RSP31 | RSP31; RN... 128 7e-030
>TAIR9_protein||AT4G25500.1 | Symbols: ATRSP35, ATRSP40, AT-SRP40, RSP35 |
ATRSP35; RNA binding / nucleic acid binding / nucleotide binding |
chr4:13025168-13027243 FORWARD
Length = 351
Score = 250 bits (637), Expect = 2e-066
Identities = 125/152 (82%), Positives = 138/152 (90%), Gaps = 5/152 (3%)
Frame = +3
Query: 555 ERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRD 734
ERRRRSPSPYKRERGSPDYGRG SPVAAY++ERTSPDYGRRRSPSPYK++RR SPEYGRD
Sbjct: 188 ERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRD 247
Query: 735 HRHRGNESPRRRERVASP-RYSRSPDNKRERVSPDRSPFKKESLKNGDGEVDSP--RRER 905
RGN+SPRRRERVASP +YSRSP+NKRER+SP+ SPFKKES +NG GEV+SP RRER
Sbjct: 248 --RRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVESPIERRER 305
Query: 906 SRSSFENGQVESPGSIGRRDSDGGYDGQIAPL 1001
SRSS ENGQVESPGSIGRRDSDGGYDG +P+
Sbjct: 306 SRSSPENGQVESPGSIGRRDSDGGYDGAESPM 337
Score = 197 bits (499), Expect = 2e-050
Identities = 145/325 (44%), Positives = 176/325 (54%), Gaps = 34/325 (10%)
Frame = +3
Query: 69 NFEYDAREGDLERLFRKYGRVERVI*KLGLLSCTWK-MRGC*RCNPST*PH*IWTQGTQT 245
NFEYDAREGDLERLFRKYG+VERV K G + R + +G +
Sbjct: 8 NFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEFGRKGRRL 67
Query: 246 PC*VDKG*AWRR-----*KIWWWWWFKEILILEAFQDSVCDKLDADNTRTRDLERHFEPY 410
W + K + + + DADNTRTRDLE+HFEPY
Sbjct: 68 RV------EWTKSERGGDKRSGGGSRRSSSSMRPSKTLFVINFDADNTRTRDLEKHFEPY 121
Query: 411 GKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVEYAMK-DERRRRSPSPYK 587
GKIVNVRIRRNFAF+QYE QEDATRAL+A+NNSKLMDKVI VEYA+K D+ R SP +
Sbjct: 122 GKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVEYAVKDDDARGNGHSPER 181
Query: 588 RERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNESPRR 767
R SP+ R SP + YKRER SPDYGR SP R R+SP+YGR R + SP +
Sbjct: 182 RRDRSPE-RRRRSP-SPYKRERGSPDYGRGASPVAAYRKERTSPDYGR----RRSPSPYK 235
Query: 768 RERVASPRYSR-----SPDNKRERVSPDRSPFKKESLKNGDGEVDSP-----RRERSRSS 917
+ R SP Y R +RERV+ SP K N E SP ++E R+
Sbjct: 236 KSRRGSPEYGRDRRGNDSPRRRERVA---SPTKYSRSPNNKRERMSPNHSPFKKESPRNG 292
Query: 918 FENGQVESPGSIGRRDSDGGYDGQI 992
G+VESP R +GQ+
Sbjct: 293 V--GEVESPIERRERSRSSPENGQV 315
Score = 98 bits (242), Expect = 1e-020
Identities = 59/104 (56%), Positives = 67/104 (64%), Gaps = 2/104 (1%)
Frame = +1
Query: 49 MKPVFCGTLSM-MRVRVILKGFSGNTEGLRG*YESWVCFRVHGR*EGAEDAIRALDRIEF 225
MKPVFCG R + + F + R ++ F AEDAIRALDR EF
Sbjct: 1 MKPVFCGNFEYDAREGDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEF 60
Query: 226 GRRGRRLRVEWTKGERGGDRRSGGGGGSRRSSSLRPSKTLFVIN 357
GR+GRRLRVEWTK ERGGD+RS GGG R SSS+RPSKTLFVIN
Sbjct: 61 GRKGRRLRVEWTKSERGGDKRS-GGGSRRSSSSMRPSKTLFVIN 103
>TAIR9_protein||AT4G25500.2 | Symbols: ATRSP35, ATRSP40, AT-SRP40 | ATRSP35; RNA
binding / nucleic acid binding / nucleotide binding |
chr4:13026073-13027243 FORWARD
Length = 310
Score = 250 bits (637), Expect = 2e-066
Identities = 125/152 (82%), Positives = 138/152 (90%), Gaps = 5/152 (3%)
Frame = +3
Query: 555 ERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRD 734
ERRRRSPSPYKRERGSPDYGRG SPVAAY++ERTSPDYGRRRSPSPYK++RR SPEYGRD
Sbjct: 147 ERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRD 206
Query: 735 HRHRGNESPRRRERVASP-RYSRSPDNKRERVSPDRSPFKKESLKNGDGEVDSP--RRER 905
RGN+SPRRRERVASP +YSRSP+NKRER+SP+ SPFKKES +NG GEV+SP RRER
Sbjct: 207 --RRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVESPIERRER 264
Query: 906 SRSSFENGQVESPGSIGRRDSDGGYDGQIAPL 1001
SRSS ENGQVESPGSIGRRDSDGGYDG +P+
Sbjct: 265 SRSSPENGQVESPGSIGRRDSDGGYDGAESPM 296
Score = 183 bits (462), Expect = 3e-046
Identities = 116/222 (52%), Positives = 138/222 (62%), Gaps = 22/222 (9%)
Frame = +3
Query: 360 DADNTRTRDLERHFEPYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVE 539
DADNTRTRDLE+HFEPYGKIVNVRIRRNFAF+QYE QEDATRAL+A+NNSKLMDKVI VE
Sbjct: 64 DADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVE 123
Query: 540 YAMK-DERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSS 716
YA+K D+ R SP +R SP+ R SP + YKRER SPDYGR SP R R+S
Sbjct: 124 YAVKDDDARGNGHSPERRRDRSPE-RRRRSP-SPYKRERGSPDYGRGASPVAAYRKERTS 181
Query: 717 PEYGRDHRHRGNESPRRRERVASPRYSR-----SPDNKRERVSPDRSPFKKESLKNGDGE 881
P+YGR R + SP ++ R SP Y R +RERV+ SP K N E
Sbjct: 182 PDYGR----RRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERVA---SPTKYSRSPNNKRE 234
Query: 882 VDSP-----RRERSRSSFENGQVESPGSIGRRDSDGGYDGQI 992
SP ++E R+ G+VESP R +GQ+
Sbjct: 235 RMSPNHSPFKKESPRNGV--GEVESPIERRERSRSSPENGQV 274
Score = 96 bits (238), Expect = 3e-020
Identities = 48/57 (84%), Positives = 51/57 (89%), Gaps = 1/57 (1%)
Frame = +1
Query: 187 AEDAIRALDRIEFGRRGRRLRVEWTKGERGGDRRSGGGGGSRRSSSLRPSKTLFVIN 357
AEDAIRALDR EFGR+GRRLRVEWTK ERGGD+RS GGG R SSS+RPSKTLFVIN
Sbjct: 7 AEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRS-GGGSRRSSSSMRPSKTLFVIN 62
>TAIR9_protein||AT4G25500.3 | Symbols: ATRSP35, ATRSP40, AT-SRP40 | ATRSP35; RNA
binding / nucleic acid binding / nucleotide binding |
chr4:13025850-13027243 FORWARD
Length = 318
Score = 250 bits (637), Expect = 2e-066
Identities = 125/152 (82%), Positives = 138/152 (90%), Gaps = 5/152 (3%)
Frame = +3
Query: 555 ERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRD 734
ERRRRSPSPYKRERGSPDYGRG SPVAAY++ERTSPDYGRRRSPSPYK++RR SPEYGRD
Sbjct: 155 ERRRRSPSPYKRERGSPDYGRGASPVAAYRKERTSPDYGRRRSPSPYKKSRRGSPEYGRD 214
Query: 735 HRHRGNESPRRRERVASP-RYSRSPDNKRERVSPDRSPFKKESLKNGDGEVDSP--RRER 905
RGN+SPRRRERVASP +YSRSP+NKRER+SP+ SPFKKES +NG GEV+SP RRER
Sbjct: 215 --RRGNDSPRRRERVASPTKYSRSPNNKRERMSPNHSPFKKESPRNGVGEVESPIERRER 272
Query: 906 SRSSFENGQVESPGSIGRRDSDGGYDGQIAPL 1001
SRSS ENGQVESPGSIGRRDSDGGYDG +P+
Sbjct: 273 SRSSPENGQVESPGSIGRRDSDGGYDGAESPM 304
Score = 183 bits (462), Expect = 3e-046
Identities = 116/222 (52%), Positives = 138/222 (62%), Gaps = 22/222 (9%)
Frame = +3
Query: 360 DADNTRTRDLERHFEPYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVE 539
DADNTRTRDLE+HFEPYGKIVNVRIRRNFAF+QYE QEDATRAL+A+NNSKLMDKVI VE
Sbjct: 72 DADNTRTRDLEKHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDASNNSKLMDKVISVE 131
Query: 540 YAMK-DERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSS 716
YA+K D+ R SP +R SP+ R SP + YKRER SPDYGR SP R R+S
Sbjct: 132 YAVKDDDARGNGHSPERRRDRSPE-RRRRSP-SPYKRERGSPDYGRGASPVAAYRKERTS 189
Query: 717 PEYGRDHRHRGNESPRRRERVASPRYSR-----SPDNKRERVSPDRSPFKKESLKNGDGE 881
P+YGR R + SP ++ R SP Y R +RERV+ SP K N E
Sbjct: 190 PDYGR----RRSPSPYKKSRRGSPEYGRDRRGNDSPRRRERVA---SPTKYSRSPNNKRE 242
Query: 882 VDSP-----RRERSRSSFENGQVESPGSIGRRDSDGGYDGQI 992
SP ++E R+ G+VESP R +GQ+
Sbjct: 243 RMSPNHSPFKKESPRNGV--GEVESPIERRERSRSSPENGQV 282
Score = 96 bits (238), Expect = 3e-020
Identities = 48/57 (84%), Positives = 51/57 (89%), Gaps = 1/57 (1%)
Frame = +1
Query: 187 AEDAIRALDRIEFGRRGRRLRVEWTKGERGGDRRSGGGGGSRRSSSLRPSKTLFVIN 357
AEDAIRALDR EFGR+GRRLRVEWTK ERGGD+RS GGG R SSS+RPSKTLFVIN
Sbjct: 15 AEDAIRALDRFEFGRKGRRLRVEWTKSERGGDKRS-GGGSRRSSSSMRPSKTLFVIN 70
>TAIR9_protein||AT5G52040.1 | Symbols: ATRSP41 | ATRSP41; RNA binding / nucleic
acid binding / nucleotide binding | chr5:21131081-21133318 FORWARD
Length = 357
Score = 206 bits (523), Expect = 3e-053
Identities = 146/296 (49%), Positives = 174/296 (58%), Gaps = 31/296 (10%)
Frame = +3
Query: 69 NFEYDAREGDLERLFRKYGRVERVI*KLGLLSCTWK--------MRGC*RCNPST*PH*I 224
NFEYDARE DLERLFRKYG+VERV K G + +R R +
Sbjct: 8 NFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEYGRTGRRL 67
Query: 225 WTQGTQTPC*VDKG*AWRR*KIWWWWWFKEILILEAFQDSVCDKLDADNTRTRDLERHFE 404
+ T+ D+G A R + L + DA NTRTRDLERHFE
Sbjct: 68 RVEWTKN----DRGGAGRS-----GGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFE 118
Query: 405 PYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVEYAMK-DERRRRSPSP 581
PYGKIVNVRIRRNFAF+QYE QEDATRAL+ATN+SKLMDKVI VEYA+K D+ R SP
Sbjct: 119 PYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSP 178
Query: 582 YKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNESP 761
+R SPD R SP + Y+RER SPDYGR SP +KR R+SP+YGR R + SP
Sbjct: 179 ERRRDRSPD-RRRRSP-SPYRRERGSPDYGRGASPVAHKR-ERTSPDYGRGRR---SPSP 232
Query: 762 RRRERVASPRYSRSPDNKRERV-SPDRSPFKKESLKNGDGEVDSP----RRERSRS 914
+R R+ SP Y R D +RERV SP+ + S + G GE SP +R SRS
Sbjct: 233 YKRARL-SPDYKRD-DRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRS 286
Score = 87 bits (215), Expect = 1e-017
Identities = 57/105 (54%), Positives = 65/105 (61%), Gaps = 5/105 (4%)
Frame = +1
Query: 49 MKPVFCGTLSM-MRVRVILKGFSGNTEGLRG*YESWVCFRVHGR*EGAEDAIRALDRIEF 225
MKPVFCG R + + F + R ++ F AEDAIRALDR E+
Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60
Query: 226 GRRGRRLRVEWTKGERGGDRRSGGGGGSRRSSS-LRPSKTLFVIN 357
GR GRRLRVEWTK +RGG +G GGSRRSSS LRPSKTLFVIN
Sbjct: 61 GRTGRRLRVEWTKNDRGG---AGRSGGSRRSSSGLRPSKTLFVIN 102
>TAIR9_protein||AT5G52040.2 | Symbols: ATRSP41 | ATRSP41; RNA binding / nucleic
acid binding / nucleotide binding | chr5:21131081-21133318 FORWARD
Length = 358
Score = 206 bits (523), Expect = 3e-053
Identities = 146/296 (49%), Positives = 174/296 (58%), Gaps = 31/296 (10%)
Frame = +3
Query: 69 NFEYDAREGDLERLFRKYGRVERVI*KLGLLSCTWK--------MRGC*RCNPST*PH*I 224
NFEYDARE DLERLFRKYG+VERV K G + +R R +
Sbjct: 8 NFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEYGRTGRRL 67
Query: 225 WTQGTQTPC*VDKG*AWRR*KIWWWWWFKEILILEAFQDSVCDKLDADNTRTRDLERHFE 404
+ T+ D+G A R + L + DA NTRTRDLERHFE
Sbjct: 68 RVEWTKN----DRGGAGRS-----GGSRRSSSGLRPSKTLFVINFDAQNTRTRDLERHFE 118
Query: 405 PYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVEYAMK-DERRRRSPSP 581
PYGKIVNVRIRRNFAF+QYE QEDATRAL+ATN+SKLMDKVI VEYA+K D+ R SP
Sbjct: 119 PYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVEYAVKDDDSRGNGYSP 178
Query: 582 YKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGRDHRHRGNESP 761
+R SPD R SP + Y+RER SPDYGR SP +KR R+SP+YGR R + SP
Sbjct: 179 ERRRDRSPD-RRRRSP-SPYRRERGSPDYGRGASPVAHKR-ERTSPDYGRGRR---SPSP 232
Query: 762 RRRERVASPRYSRSPDNKRERV-SPDRSPFKKESLKNGDGEVDSP----RRERSRS 914
+R R+ SP Y R D +RERV SP+ + S + G GE SP +R SRS
Sbjct: 233 YKRARL-SPDYKRD-DRRRERVASPENGAVRNRSPRKGRGESRSPPPYEKRRESRS 286
Score = 87 bits (215), Expect = 1e-017
Identities = 57/105 (54%), Positives = 65/105 (61%), Gaps = 5/105 (4%)
Frame = +1
Query: 49 MKPVFCGTLSM-MRVRVILKGFSGNTEGLRG*YESWVCFRVHGR*EGAEDAIRALDRIEF 225
MKPVFCG R + + F + R ++ F AEDAIRALDR E+
Sbjct: 1 MKPVFCGNFEYDARESDLERLFRKYGKVERVDMKAGFAFVYMEDERDAEDAIRALDRFEY 60
Query: 226 GRRGRRLRVEWTKGERGGDRRSGGGGGSRRSSS-LRPSKTLFVIN 357
GR GRRLRVEWTK +RGG +G GGSRRSSS LRPSKTLFVIN
Sbjct: 61 GRTGRRLRVEWTKNDRGG---AGRSGGSRRSSSGLRPSKTLFVIN 102
>TAIR9_protein||AT5G52040.3 | Symbols: | ATRSP41; RNA binding / nucleic acid
binding / nucleotide binding | chr5:21131791-21133318 FORWARD
Length = 330
Score = 186 bits (470), Expect = 4e-047
Identities = 114/191 (59%), Positives = 133/191 (69%), Gaps = 14/191 (7%)
Frame = +3
Query: 360 DADNTRTRDLERHFEPYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVE 539
DA NTRTRDLERHFEPYGKIVNVRIRRNFAF+QYE QEDATRAL+ATN+SKLMDKVI VE
Sbjct: 77 DAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVE 136
Query: 540 YAMK-DERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSS 716
YA+K D+ R SP +R SPD R SP + Y+RER SPDYGR SP +KR R+S
Sbjct: 137 YAVKDDDSRGNGYSPERRRDRSPD-RRRRSP-SPYRRERGSPDYGRGASPVAHKR-ERTS 193
Query: 717 PEYGRDHRHRGNESPRRRERVASPRYSRSPDNKRERV-SPDRSPFKKESLKNGDGEVDSP 893
P+YGR R + SP +R R+ SP Y R D +RERV SP+ + S + G GE SP
Sbjct: 194 PDYGRGRR---SPSPYKRARL-SPDYKRD-DRRRERVASPENGAVRNRSPRKGRGESRSP 248
Query: 894 ----RRERSRS 914
+R SRS
Sbjct: 249 PPYEKRRESRS 259
Score = 86 bits (211), Expect = 4e-017
Identities = 48/70 (68%), Positives = 51/70 (72%), Gaps = 4/70 (5%)
Frame = +1
Query: 151 WVCFRVHGR*EGAEDAIRALDRIEFGRRGRRLRVEWTKGERGGDRRSGGGGGSRRSSS-L 327
W F AEDAIRALDR E+GR GRRLRVEWTK +RGG +G GGSRRSSS L
Sbjct: 9 WFAFVYMEDERDAEDAIRALDRFEYGRTGRRLRVEWTKNDRGG---AGRSGGSRRSSSGL 65
Query: 328 RPSKTLFVIN 357
RPSKTLFVIN
Sbjct: 66 RPSKTLFVIN 75
>TAIR9_protein||AT5G52040.4 | Symbols: | ATRSP41; RNA binding / nucleic acid
binding / nucleotide binding | chr5:21131881-21133318 FORWARD
Length = 325
Score = 186 bits (470), Expect = 4e-047
Identities = 114/191 (59%), Positives = 133/191 (69%), Gaps = 14/191 (7%)
Frame = +3
Query: 360 DADNTRTRDLERHFEPYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVE 539
DA NTRTRDLERHFEPYGKIVNVRIRRNFAF+QYE QEDATRAL+ATN+SKLMDKVI VE
Sbjct: 71 DAQNTRTRDLERHFEPYGKIVNVRIRRNFAFIQYEAQEDATRALDATNSSKLMDKVISVE 130
Query: 540 YAMK-DERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSS 716
YA+K D+ R SP +R SPD R SP + Y+RER SPDYGR SP +KR R+S
Sbjct: 131 YAVKDDDSRGNGYSPERRRDRSPD-RRRRSP-SPYRRERGSPDYGRGASPVAHKR-ERTS 187
Query: 717 PEYGRDHRHRGNESPRRRERVASPRYSRSPDNKRERV-SPDRSPFKKESLKNGDGEVDSP 893
P+YGR R + SP +R R+ SP Y R D +RERV SP+ + S + G GE SP
Sbjct: 188 PDYGRGRR---SPSPYKRARL-SPDYKRD-DRRRERVASPENGAVRNRSPRKGRGESRSP 242
Query: 894 ----RRERSRS 914
+R SRS
Sbjct: 243 PPYEKRRESRS 253
Score = 86 bits (210), Expect = 5e-017
Identities = 46/58 (79%), Positives = 49/58 (84%), Gaps = 4/58 (6%)
Frame = +1
Query: 187 AEDAIRALDRIEFGRRGRRLRVEWTKGERGGDRRSGGGGGSRRSSS-LRPSKTLFVIN 357
AEDAIRALDR E+GR GRRLRVEWTK +RGG +G GGSRRSSS LRPSKTLFVIN
Sbjct: 15 AEDAIRALDRFEYGRTGRRLRVEWTKNDRGG---AGRSGGSRRSSSGLRPSKTLFVIN 69
>TAIR9_protein||AT2G46610.1 | Symbols: | arginine/serine-rich splicing factor,
putative | chr2:19136769-19138492 REVERSE
Length = 251
Score = 157 bits (396), Expect = 1e-038
Identities = 108/269 (40%), Positives = 137/269 (50%), Gaps = 59/269 (21%)
Frame = +3
Query: 69 NFEYDAREGDLERLFRKYGRVERVI*KLGLLSCTWK----MRGC*RCNPST*PH*IWTQG 236
NF+YD R DLERLF K+GRV+RV K G ++ R +T
Sbjct: 8 NFDYDTRHSDLERLFSKFGRVKRVDMKSGYAFVYFEDERDAEDAIRRTDNT--------- 58
Query: 237 TQTPC*VDKG*AWRR*KIWWWWWF----------KEILILEAFQDSVCDKLDADNTRTRD 386
G R+ + W F K + + D TR RD
Sbjct: 59 -------TFGYGRRKLSVEWAKDFQGERGKPRDGKAVSNQRPTKTLFVINFDPIRTRERD 111
Query: 387 LERHFEPYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVEYAMKD---- 554
+ERHFEPYGK++NVR+RRNFAFVQ+ QEDAT+AL++T+NSKL+DKV+ VEYA+++
Sbjct: 112 MERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVEYALREAGER 171
Query: 555 ------ERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSS 716
RRRRSPSP R R SPDY R R SP+Y R + P+PY+ RR S
Sbjct: 172 EDRYAGSRRRRSPSPVYRRRPSPDYTR-----------RRSPEYDRYKGPAPYE--RRKS 218
Query: 717 PEYGRDHRHRGNESPRRRERVASPRYSRS 803
P+YGR S R R SP Y RS
Sbjct: 219 PDYGR------RSSDYGRARARSPGYDRS 241
>TAIR9_protein||AT2G46610.2 | Symbols: | arginine/serine-rich splicing factor,
putative | chr2:19136769-19137858 REVERSE
Length = 225
Score = 148 bits (372), Expect = 9e-036
Identities = 82/158 (51%), Positives = 101/158 (63%), Gaps = 29/158 (18%)
Frame = +3
Query: 360 DADNTRTRDLERHFEPYGKIVNVRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVE 539
D TR RD+ERHFEPYGK++NVR+RRNFAFVQ+ QEDAT+AL++T+NSKL+DKV+ VE
Sbjct: 77 DPIRTRERDMERHFEPYGKVLNVRMRRNFAFVQFATQEDATKALDSTHNSKLLDKVVSVE 136
Query: 540 YAMKD----------ERRRRSPSPYKRERGSPDYGRGGSPVAAYKRERTSPDYGRRRSPS 689
YA+++ RRRRSPSP R R SPDY R R SP+Y R + P+
Sbjct: 137 YALREAGEREDRYAGSRRRRSPSPVYRRRPSPDYTR-----------RRSPEYDRYKGPA 185
Query: 690 PYKRTRRSSPEYGRDHRHRGNESPRRRERVASPRYSRS 803
PY+ RR SP+YGR S R R SP Y RS
Sbjct: 186 PYE--RRKSPDYGR------RSSDYGRARARSPGYDRS 215
>TAIR9_protein||AT3G61860.1 | Symbols: ATRSP31, RSP31 | RSP31; RNA binding /
nucleic acid binding / nucleotide binding | chr3:22900311-22902159
REVERSE
Length = 265
Score = 128 bits (321), Expect = 7e-030
Identities = 108/265 (40%), Positives = 132/265 (49%), Gaps = 20/265 (7%)
Frame = +3
Query: 69 NFEYDAREGDLERLFRKYGRVERVI*KLGLLSCTWK-MRGC*RCNPST*PH*IWTQGTQT 245
NFEY+ R+ DLERLF KYGRV+RV K G ++ R + +
Sbjct: 8 NFEYETRQSDLERLFDKYGRVDRVDMKSGYAFVYFEDERDAEDAIRKLDNFPFGYEKRRL 67
Query: 246 PC*VDKG*AWRR*KIWWWWWFKEILILEAFQDSVCDKLDADNTRTRDLERHFEPYGKIVN 425
KG R K L+ + D T+ D+E+HFEPYGK+ N
Sbjct: 68 SVEWAKGERGRP-----RGDAKAPSNLKPTKTLFVINFDPIRTKEHDIEKHFEPYGKVTN 122
Query: 426 VRIRRNFAFVQYEEQEDATRALEATNNSKLMDKVILVEYAMK--DERRRRSPSPYKRERG 599
VRIRRNF+FVQ+E QEDAT+ALEAT SK++D+V+ VEYA+K DER R+ R
Sbjct: 123 VRIRRNFSFVQFETQEDATKALEATQRSKILDRVVSVEYALKDDDERDDRNGGRSPRRSL 182
Query: 600 SPDYGRGGSPVAAYKRERTSPDYGRRRSPSPYKRTRRSSPEYGR---DHRHRGNESPRRR 770
SP Y R SP Y R R SP GRR SP Y R R SPEY R + SP
Sbjct: 183 SPVYRRRPSP--DYGR-RPSPGQGRRPSPD-YGRAR--SPEYDRYKGPAAYERRRSPDYG 236
Query: 771 ERVASPRYSRSPDNKRERVSPDRSP 845
R + RSP R R RSP
Sbjct: 237 RRSSDYGRQRSPGYDRYR---SRSP 258
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,473,873,593
Number of Sequences: 33410
Number of Extensions: 7473873593
Number of Successful Extensions: 254010249
Number of sequences better than 0.0: 0
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