BLASTX 7.6.2
Query= UN14400 /QuerySize=1221
(1220 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G07950.1 | Symbols: | rhomboid protein-relate... 569 1e-162
>TAIR9_protein||AT3G07950.1 | Symbols: | rhomboid protein-related |
chr3:2531982-2534277 FORWARD
Length = 305
Score = 569 bits (1466), Expect = 1e-162
Identities = 280/305 (91%), Positives = 292/305 (95%)
Frame = +1
Query: 115 MSSPGASMFTNFTKLCKGLALVLVVGHVLVHFVPSTVTYLALIPARTIPFGWNLITSGYF 294
MSSPG SMFTNFTKLCKGLALVLVVGH++V F+P+TV YLALIPARTIPF WNLITSGYF
Sbjct: 1 MSSPGTSMFTNFTKLCKGLALVLVVGHLVVQFIPATVPYLALIPARTIPFAWNLITSGYF 60
Query: 295 ELSVYGVVFSVVSLLFMGKFLEPVWGSKEFLKFIFVVNFLTYLCVFVTAIALYYITRLEI 474
ELSVYGVVFS VSLLFMGKFLEPVWGS EFLKFIFVVNFLTYLCVFVTAIALYYITRLE+
Sbjct: 61 ELSVYGVVFSTVSLLFMGKFLEPVWGSTEFLKFIFVVNFLTYLCVFVTAIALYYITRLEV 120
Query: 475 YLYMPFAGFHGVLAGLLVGIKQIIPDQEVLLVKIKAKWLPSIMLVLSIASSFFTLNSAAY 654
YLYMPFAGFHGVLAGLLVGIKQIIPDQE+LL+KIKAKWLPSIML+LSIASSFFTL+SAAY
Sbjct: 121 YLYMPFAGFHGVLAGLLVGIKQIIPDQEILLLKIKAKWLPSIMLILSIASSFFTLDSAAY 180
Query: 655 LPTLIFGTYMGWLYLRYLQRRPETKLRGDPSDDFAFSTFFPEFLRPIIDPIASIFHRMLC 834
LPTLIFGTYMGWLYLRYLQRRPETKLRGDPSDDFAFSTFFPE LRP+IDPIA IFHRMLC
Sbjct: 181 LPTLIFGTYMGWLYLRYLQRRPETKLRGDPSDDFAFSTFFPELLRPVIDPIALIFHRMLC 240
Query: 835 GRSNATSEDHGYTTSGAPLPGSDSAEASRRRERGARALEERLATERLVPPRNKDELQSDA 1014
GRSNATSEDH Y+TSGAPLPGSDSAEASRRRERGARALEERL TERLVP RNKDELQSD
Sbjct: 241 GRSNATSEDHDYSTSGAPLPGSDSAEASRRRERGARALEERLGTERLVPARNKDELQSDG 300
Query: 1015 LDSV* 1029
LD+V*
Sbjct: 301 LDNV* 305
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,559,953,775
Number of Sequences: 33410
Number of Extensions: 7559953775
Number of Successful Extensions: 254058705
Number of sequences better than 0.0: 0
|