Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN14400


BLASTX 7.6.2

Query= UN14400 /QuerySize=1221
        (1220 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G07950.1 | Symbols:  | rhomboid protein-relate...    569   1e-162

>TAIR9_protein||AT3G07950.1 | Symbols:  | rhomboid protein-related |
        chr3:2531982-2534277 FORWARD

          Length = 305

 Score =  569 bits (1466), Expect = 1e-162
 Identities = 280/305 (91%), Positives = 292/305 (95%)
 Frame = +1

Query:  115 MSSPGASMFTNFTKLCKGLALVLVVGHVLVHFVPSTVTYLALIPARTIPFGWNLITSGYF 294
            MSSPG SMFTNFTKLCKGLALVLVVGH++V F+P+TV YLALIPARTIPF WNLITSGYF
Sbjct:    1 MSSPGTSMFTNFTKLCKGLALVLVVGHLVVQFIPATVPYLALIPARTIPFAWNLITSGYF 60

Query:  295 ELSVYGVVFSVVSLLFMGKFLEPVWGSKEFLKFIFVVNFLTYLCVFVTAIALYYITRLEI 474
            ELSVYGVVFS VSLLFMGKFLEPVWGS EFLKFIFVVNFLTYLCVFVTAIALYYITRLE+
Sbjct:   61 ELSVYGVVFSTVSLLFMGKFLEPVWGSTEFLKFIFVVNFLTYLCVFVTAIALYYITRLEV 120

Query:  475 YLYMPFAGFHGVLAGLLVGIKQIIPDQEVLLVKIKAKWLPSIMLVLSIASSFFTLNSAAY 654
            YLYMPFAGFHGVLAGLLVGIKQIIPDQE+LL+KIKAKWLPSIML+LSIASSFFTL+SAAY
Sbjct:  121 YLYMPFAGFHGVLAGLLVGIKQIIPDQEILLLKIKAKWLPSIMLILSIASSFFTLDSAAY 180

Query:  655 LPTLIFGTYMGWLYLRYLQRRPETKLRGDPSDDFAFSTFFPEFLRPIIDPIASIFHRMLC 834
            LPTLIFGTYMGWLYLRYLQRRPETKLRGDPSDDFAFSTFFPE LRP+IDPIA IFHRMLC
Sbjct:  181 LPTLIFGTYMGWLYLRYLQRRPETKLRGDPSDDFAFSTFFPELLRPVIDPIALIFHRMLC 240

Query:  835 GRSNATSEDHGYTTSGAPLPGSDSAEASRRRERGARALEERLATERLVPPRNKDELQSDA 1014
            GRSNATSEDH Y+TSGAPLPGSDSAEASRRRERGARALEERL TERLVP RNKDELQSD 
Sbjct:  241 GRSNATSEDHDYSTSGAPLPGSDSAEASRRRERGARALEERLGTERLVPARNKDELQSDG 300

Query: 1015 LDSV* 1029
            LD+V*
Sbjct:  301 LDNV* 305

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,559,953,775
Number of Sequences: 33410
Number of Extensions: 7559953775
Number of Successful Extensions: 254058705
Number of sequences better than 0.0: 0