BLASTX 7.6.2
Query= UN14508 /QuerySize=1761
(1760 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G30790.1 | Symbols: | F-box family protein | ... 297 3e-080
TAIR9_protein||AT1G32660.1 | Symbols: | F-box family protein | ... 259 6e-069
TAIR9_protein||AT1G50870.1 | Symbols: | F-box family protein | ... 108 2e-023
TAIR9_protein||AT1G30780.1 | Symbols: | F-box family protein | ... 84 3e-016
TAIR9_protein||AT1G47790.1 | Symbols: | F-box family protein | ... 82 7e-016
TAIR9_protein||AT3G52320.1 | Symbols: | F-box family protein | ... 79 8e-015
TAIR9_protein||AT2G16810.1 | Symbols: | F-box family protein (F... 72 1e-012
TAIR9_protein||AT4G19940.1 | Symbols: | F-box family protein | ... 64 3e-010
TAIR9_protein||AT4G19930.1 | Symbols: | F-box family protein | ... 61 2e-009
TAIR9_protein||AT3G47150.1 | Symbols: | F-box family protein | ... 59 7e-009
TAIR9_protein||AT5G62660.1 | Symbols: | F-box family protein | ... 59 7e-009
TAIR9_protein||AT1G70960.1 | Symbols: | F-box family protein | ... 55 1e-007
TAIR9_protein||AT1G19160.1 | Symbols: | FUNCTIONS IN: molecular... 54 4e-007
TAIR9_protein||AT1G32420.1 | Symbols: | F-box family protein | ... 52 8e-007
TAIR9_protein||AT1G47800.1 | Symbols: | F-box family protein | ... 52 8e-007
TAIR9_protein||AT5G62510.1 | Symbols: | F-box family protein | ... 52 1e-006
TAIR9_protein||AT5G44220.1 | Symbols: | F-box family protein | ... 52 1e-006
>TAIR9_protein||AT1G30790.1 | Symbols: | F-box family protein |
chr1:10932713-10933912 FORWARD
Length = 400
Score = 297 bits (758), Expect = 3e-080
Identities = 182/397 (45%), Positives = 244/397 (61%), Gaps = 25/397 (6%)
Frame = -3
Query: 1341 PYDMEVETLIRLPGKSLMRFLCVSKTWYSLIRSQRFVASYY--AAKPPRFTVTFTNSVF- 1171
P+D+ VE L RLP KSLM+F CVSK W S+I +Q F+ S+Y ++ PRF V F+N F
Sbjct: 10 PFDLTVEILTRLPAKSLMKFKCVSKLWSSIIHNQSFIDSFYSISSTRPRFIVAFSNGSFP 69
Query: 1170 -SEPKRLFIFSGEEE-VTSSSSLVANLDMTIPSVTMPFG-GYKYSSVHGFMAVNDRLKFI 1000
+ KRLFIFS E SSSS++ NLD TIPS+T+ + SV+GF+A + +F
Sbjct: 70 SDKEKRLFIFSSSHEGHESSSSVITNLDTTIPSLTVSNNLASRCISVNGFIACSLYTRFT 129
Query: 999 ICNPTTGQVITFHC----KATD---TCLGYDPVGDQFKALTLLTSRYAHNPSFMVHEVKR 841
ICNP+T QVI +A D TC+GYDPV DQFKAL L++S + S + H V
Sbjct: 130 ICNPSTRQVIVLPILPSGRAPDMRSTCIGYDPVDDQFKALALISSCIPNKDSTVEHLVLT 189
Query: 840 LGRGGRVVSRTQITS----PPYDPITRGRCINGFIYYGASVPEETPPTSVFVCFDVRYET 673
L + S QI PPY P+T CING +YYGA P ++ +V VCFDVR E
Sbjct: 190 LKGDKKNYSWRQIQGNNNIPPYSPVTMRVCINGVVYYGAWTPRQS-MNAVIVCFDVRSEK 248
Query: 672 ILSFIPTPREVLLWQAFTSLIDYKGKLAVVVPICQRTGLSFDRFNLWILEDVTKQEWSKQ 493
I +FI TP++V+ W + L++YKGKLA +V + FD F+LW+LED+ KQEWSKQ
Sbjct: 249 I-TFIKTPKDVVRWCNDSILMEYKGKLASIV---RNRYSRFDTFDLWVLEDIEKQEWSKQ 304
Query: 492 TFELPLSLPFNIGMGKRMISQGTNKAGEIIFSPATLPD-RAQPFYVFYFNPVTKSMRRVR 316
T E+PLS+ ++ M G NK GEII +P L + FY+FY++ TK +RRVR
Sbjct: 305 TCEIPLSV-WDSVENFNMSFPGINKFGEIILAPTCLSGYHLRSFYIFYYHVETKKIRRVR 363
Query: 315 IHGVADTEDFWSRYGL-TGICCASFSPHHVDSIAFL* 208
+ G+AD E+F YG+ +G C SP HV++I FL*
Sbjct: 364 LEGIADDENFRRCYGIGSGQCNVFISPEHVETIRFL* 400
>TAIR9_protein||AT1G32660.1 | Symbols: | F-box family protein |
chr1:11811040-11812380 FORWARD
Length = 447
Score = 259 bits (660), Expect = 6e-069
Identities = 181/447 (40%), Positives = 241/447 (53%), Gaps = 29/447 (6%)
Frame = -3
Query: 1515 KEHESSSRFILEPIPLDLKKKKKKKMDRSPANHHQR-EVDESRDGNGVGSDKKILQVIFP 1339
++ SS L+PIPLDLK +H + E DE D N K+ P
Sbjct: 9 EDRSCSSASKLDPIPLDLKMATVPTKSHMKKSHQNKLEEDEKEDTN----PSKLELDSLP 64
Query: 1338 YDMEVETLIRLPGKSLMRFLCVSKTWYSLIRSQRFVASYYA--AKPPRFTVTFTNSVFSE 1165
D+++ L R+P KSLM+ CVSK W S+IRS+ F+ SYYA +K RF V +N+ F+E
Sbjct: 65 LDLKMAILTRIPAKSLMKLRCVSKMWSSIIRSRGFIDSYYAISSKQSRFIVGLSNAAFNE 124
Query: 1164 PKR----LFIFSGEE-EVTSSSSLVANLDMTIPSVTMPFGGYKYSSVHGFMAVNDRLKFI 1000
P++ LF FS E+ E +SSSSLV N +M +P ++ + +S HG +AV + +
Sbjct: 125 PEKQLTFLFSFSHEDGEKSSSSSLVPNFEMAVP-CSLAGLSHSLASFHGILAVEGK---V 180
Query: 999 ICNPTTGQVITFHCKATDTCLGYDPVGDQFKALTLLTSRYAHNPSFMVHEVKRLGRGGRV 820
+CNP T Q T +GYDP+ DQ+KAL + H + + H+V LG GG
Sbjct: 181 MCNPNTEQFTTL--PVGTIFVGYDPIDDQYKALGFDFDKRCHG-NAIGHKVWTLG-GGEG 236
Query: 819 VSRTQITSPPYDPITRGR-CINGFIYYGASVPEETPPTSVFVCFDVRYETILSFIPTPRE 643
+ + + PY PI CING IYYGA +T V VCFDVR E LSFI P
Sbjct: 237 MRQIRGDLAPYRPILLPNVCINGVIYYGAHTLSQT-KDPVIVCFDVRSEK-LSFITAPAV 294
Query: 642 VLLWQAFTSLIDYKGKLAVVVPICQRTGLSFDRFNLWILEDVTKQEWSKQTFELPLSLPF 463
VL + LIDYKGKLA +V G F WILED K EWS+Q+ + P SL
Sbjct: 295 VLQSGMKSILIDYKGKLASIVR--NSCGGCISSFVFWILEDPKKHEWSRQSCDFPYSLWD 352
Query: 462 NIGMGKRMISQGTNKAGEIIFSPATLPDRAQPFYVFYFNPVTKSMRRVRIHGVADTEDFW 283
+G R+ GTNKAGEII +P L + FY+FY+N TK+MRRVR+ G+ +F
Sbjct: 353 YVG-NVRICFFGTNKAGEIIIAPMFLSRDVRSFYIFYYNVETKTMRRVRLRGIGSDIEFR 411
Query: 282 SRYGLTGICC---ASFSPHHVDSIAFL 211
YG C + HV+SIAFL
Sbjct: 412 RSYGSENKLCNCHVRIAHQHVESIAFL 438
>TAIR9_protein||AT1G50870.1 | Symbols: | F-box family protein |
chr1:18855147-18856337 FORWARD
Length = 397
Score = 108 bits (268), Expect = 2e-023
Identities = 113/372 (30%), Positives = 155/372 (41%), Gaps = 46/372 (12%)
Frame = -3
Query: 1362 KILQVIFPYDMEVETLIRLPGKSLMRFLCVSKTWYSLIRSQRFVASYYAAKPPRFTVTFT 1183
K ++ P D+ +E L+RLP KS++RF CVSK W S F SY A R ++
Sbjct: 25 KTTTLLCPLDLILEILLRLPVKSVLRFRCVSKLWLSTTTDPYFTNSYEARSSTRPSLLM- 83
Query: 1182 NSVFSEPKRLFIFS------GEEEVTSSSSLVANLDMTIPS-VTMPFGGYKYSSVHGFMA 1024
F +LF+F+ +E S S V + + P PF SVHG ++
Sbjct: 84 --FFKNKDKLFVFTFPHHNQNSKETHSYSQHVDSYHIKYPKYCCFPF----TESVHGLIS 137
Query: 1023 VNDRLKFIICNPTTGQVITF-----HCKATDTCLGYDPVGDQFKALTLLTSRYAHNPSFM 859
K II NPT Q + K LGYDPV + K + + N
Sbjct: 138 FRISTKPIIWNPTMRQFLILPKPEKSWKGLSVFLGYDPVEGKHKLMCM-------NRDNT 190
Query: 858 VHEVKRLGRGGRVVSRTQITSP-PYDPITR--GRCINGFIYYGASVPEE---TPPTSVFV 697
E + L G +I S + I R G+CING IYY A + + + PT +
Sbjct: 191 SDECRVLTLGSAQEKWRRIKSNLKHRSILRYYGQCINGVIYYQAYIDQMGFISNPT--IM 248
Query: 696 CFDVRYETILSFIPTPREVLLWQAFTSLIDYKGKLAVVVPICQRTGLSFDRFNLWILEDV 517
F+VR E I P LI Y+G+LA V LW LED
Sbjct: 249 SFEVRSEK-FDTITLPSGSFA----NMLIPYQGRLACVNNTMDDVN---GGITLWTLEDA 300
Query: 516 TKQEWSKQTFELPLSLPFNIGMGKRMISQGTNKAGEIIFSPATLPDRAQPFYVFYFNPVT 337
K WS + F PL+ ++ + G AGE I+ +T + FYV YF+P
Sbjct: 301 EKHIWSCKLFLAPLA-HYDRSLKTDFKLDGITHAGEFIYVLSTF---LKSFYVLYFDPKK 356
Query: 336 KSMRRVRIHGVA 301
S R+V G A
Sbjct: 357 NSFRKVEFRGTA 368
>TAIR9_protein||AT1G30780.1 | Symbols: | F-box family protein |
chr1:10923919-10926561 REVERSE
Length = 483
Score = 84 bits (206), Expect = 3e-016
Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 7/104 (6%)
Frame = -3
Query: 939 LGYDPVGDQFKALTLLTSRYAHNPSFMVHEVKRLGRGGRVVSRTQITSPPYDPITRGRCI 760
+GYDP+ DQ KAL++ N + H+V LG GG+ ++T+ P+ P+T G I
Sbjct: 296 VGYDPIDDQQKALSVSVPSRKRN---LEHKVLTLGGGGQGWRHIEVTNAPFSPVTVGVSI 352
Query: 759 NGFIYYGASVPEETPPTS-VFVCFDVRYETILSFIPTPREVLLW 631
+GF+YYGA P TPP + V VCFDVR E I SFI P +VL W
Sbjct: 353 DGFVYYGAYSP--TPPMNPVLVCFDVRSEKI-SFIKAPNDVLQW 393
Score = 49 bits (116), Expect = 7e-006
Identities = 37/118 (31%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Frame = -3
Query: 1521 KSKEHESSSRFILEPIPLDLKKKKKKKMDRSPANHHQREVDESRDGNGVGSDKKILQV-- 1348
K K+ + L+P P+DLK + R + E E G+G D ++
Sbjct: 174 KGKDRFCNRPSKLDPNPVDLKTVRLPSKFRLKKLLCRVESSEVCFGDGNEKDTNPSEIDL 233
Query: 1347 -IFPYDMEVETLIRLPGKSLMRFLCVSKTWYSLIRSQRFVASYYA-----AKPPRFTV 1192
P+D+++ L RL KSL F VSK W S+I SQRF+ S++ ++ P+F V
Sbjct: 234 DSLPFDLKMVILTRLSAKSLTNFKRVSKMWSSIIGSQRFIDSFFTMSSKQSRCPKFPV 291
>TAIR9_protein||AT1G47790.1 | Symbols: | F-box family protein |
chr1:17600004-17601173 REVERSE
Length = 390
Score = 82 bits (202), Expect = 7e-016
Identities = 76/262 (29%), Positives = 117/262 (44%), Gaps = 22/262 (8%)
Frame = -3
Query: 1344 FPYDMEVETLIRLPGKSLMRFLCVSKTWYSLIRSQRFVASYYAAKPPRFTVTFTNSVFSE 1165
FP D+ E L+RLP KS++RF CVSK W S+I F+ +Y R ++ F F +
Sbjct: 25 FPLDLASEILLRLPVKSVVRFRCVSKLWSSIITDPYFIKTYETQSSTRQSLLF---CFKQ 81
Query: 1164 PKRLFIFS-GEEEVTSSSSLVANLDMTIPSVTMPFG-GYKYSSVHGFMAVNDRLKFIICN 991
+LF+FS + S+SS A +D + F SVHG + + I+ N
Sbjct: 82 SDKLFVFSIPKHHYDSNSSSQAAIDRFQVKLPQEFSYPSPTESVHGLICFHVLATVIVWN 141
Query: 990 PTTGQVITF-----HCKATDTCLGYDPVGDQFKALTLLTSRYAHNPSFM-VHEVKRLGRG 829
P+ Q +T K LGYDP+ + K + L +R + + ++ R
Sbjct: 142 PSMRQFLTLPKPRKSWKELTVFLGYDPIEGKHKVVCLPRNRTCDECQVLTLGSAQKSWRT 201
Query: 828 GRVVSRTQITSPPYDPITRGRCINGFIYYGASVPEETPPTSVFVCFDVRYETILSFIPTP 649
+ + + T+ T GRCI G +YY A V + F V+ E I P
Sbjct: 202 VKTKHKHRSTND-----TWGRCIKGVVYYIAYVYHTR--VWCIMSFHVKSEK-FDMIKLP 253
Query: 648 REVLLWQAFTSLIDYKGKLAVV 583
E + +I+Y+G+LA V
Sbjct: 254 LENIYRDV---MINYEGRLACV 272
>TAIR9_protein||AT3G52320.1 | Symbols: | F-box family protein |
chr3:19403020-19404192 REVERSE
Length = 391
Score = 79 bits (193), Expect = 8e-015
Identities = 49/156 (31%), Positives = 77/156 (49%), Gaps = 11/156 (7%)
Frame = -3
Query: 1341 PYDMEVETLIRLPGKSLMRFLCVSKTWYSLIRSQRFVASYYAAKPPRFTVTFTNSVFSEP 1162
P +M ++ LIRLP KSLMRF CVSK W SLI S+ F ++ P + ++
Sbjct: 28 PEEMLIDILIRLPAKSLMRFKCVSKLWLSLITSRYFTNRFFKPSSPSCLFAYLVDRENQS 87
Query: 1161 KRLFI---FSGEEEVTSSSSLVANLDMTIPSVTMPFGGYKYSSVHGFMAVNDRLKFIICN 991
K L + S + + +S V + TIP + GGY ++ G + + +CN
Sbjct: 88 KYLLLQSSSSSRHDHSDTSVSVIDQHSTIPIM----GGYLVNAARGLLCYRTGRRVKVCN 143
Query: 990 PTTGQVITFHCKATDT----CLGYDPVGDQFKALTL 895
P+T Q++ + T G+DP D++K L+L
Sbjct: 144 PSTRQIVELPIMRSKTNVWNWFGHDPFHDEYKVLSL 179
>TAIR9_protein||AT2G16810.1 | Symbols: | F-box family protein (FBX8) |
chr2:7287944-7288831 REVERSE
Length = 296
Score = 72 bits (174), Expect = 1e-012
Identities = 74/237 (31%), Positives = 106/237 (44%), Gaps = 25/237 (10%)
Frame = -3
Query: 1341 PYDMEVETLIRLPGKSLMRFLCVSKTWYSLIRSQRFVASY--YAAKPPRFTVTFTNSVFS 1168
P D+ +E L RLP KS+MRF CVSK W SL+ S+ F + ++P ++
Sbjct: 42 PQDLLIEILTRLPPKSVMRFKCVSKFWSSLLSSRYFCNRFLIVPSQPQPSLYMCLLDRYN 101
Query: 1167 EPKRLFIFSGEEEVTSSSSLVANLDMTIPSVTMPFGGYKYSSVHGFMAVNDRLKFIICNP 988
K L + S TS S V + D+TI + GG+ + GF+ LK I NP
Sbjct: 102 YSKSLILSSAPS--TSPYSFVFDQDLTIRKM----GGFFLRILRGFIFFTRNLKARIYNP 155
Query: 987 TTGQ-VITFHCKATDTCLG----------YDPVGDQFKALTLLTSRYAHNPSFMVHE--V 847
TT Q VI K +D G +DPV D++K L ++ ++ + E +
Sbjct: 156 TTRQLVILPTIKESDIIAGPPYNILYFICHDPVNDRYKLLCTVSYASDNDLQNLKSELWI 215
Query: 846 KRLGRGGRVVSRTQITSPPYDPITRGRCINGFIYYGASVPEETPPTSVFVCFDVRYE 676
L GG R P + P +NG +Y+ A P T + V FDVR E
Sbjct: 216 FVLEAGGS-WKRVANEFPHHVPSHLDLNMNGVLYFLAWT---DPHTCMLVSFDVRSE 268
>TAIR9_protein||AT4G19940.1 | Symbols: | F-box family protein |
chr4:10806195-10807430 FORWARD
Length = 412
Score = 64 bits (154), Expect = 3e-010
Identities = 46/129 (35%), Positives = 70/129 (54%), Gaps = 10/129 (7%)
Frame = -3
Query: 1341 PYDMEVETLIRLPGKSLMRFLCVSKTWYSLIRSQRFVASYY-AAKPPRFTVTFTNSVFSE 1165
P+D+ +E L RLP KSLMRF VSK W SLI S+ F + PPR + ++S S
Sbjct: 36 PFDLVIEILTRLPAKSLMRFKSVSKLWSSLICSRNFTNRLLKLSSPPRLFMCLSSSDNSH 95
Query: 1164 PKRLFIFSG---EEEVTSSSSLVANLDMTIPSVTMPFGGYKYSSV-HGFMAVNDRLKFII 997
K + + + ++T SSS++ + D+T+P + GY+ S V G M + + I
Sbjct: 96 LKTVLLSLSSPPDSDITMSSSVI-DQDLTMPGMK----GYQISHVFRGLMCLVKKSSAQI 150
Query: 996 CNPTTGQVI 970
N TT Q++
Sbjct: 151 YNTTTRQLV 159
>TAIR9_protein||AT4G19930.1 | Symbols: | F-box family protein |
chr4:10803558-10804853 FORWARD
Length = 432
Score = 61 bits (146), Expect = 2e-009
Identities = 45/132 (34%), Positives = 65/132 (49%), Gaps = 13/132 (9%)
Frame = -3
Query: 1341 PYDMEVETLIRLPGKSLMRFLCVSKTWYSLIRSQRFVASYYAAKPPRF------TVTFTN 1180
P+D+ +E L RLP KSLMRF VSK W SLI S+ F + + P F T+TF +
Sbjct: 44 PFDLVIEILTRLPAKSLMRFKSVSKLWSSLICSRTF--TNRLLRVPSFIQRLYVTLTFLD 101
Query: 1179 SVFSEPKRLFIFSGE--EEVTSSSSLVANLDMTIPSVTMPFGGYKYSSVHGFMAVNDRLK 1006
+ +L S ++++ SS V + D+T PS+ G Y + G M
Sbjct: 102 NSLQRKSKLLSSSSSPGSDISTMSSFVVDRDLTTPSMK---GYYLSHVLRGLMCFVKEPS 158
Query: 1005 FIICNPTTGQVI 970
I N TT Q++
Sbjct: 159 VKIYNTTTRQLV 170
>TAIR9_protein||AT3G47150.1 | Symbols: | F-box family protein |
chr3:17358591-17359765 FORWARD
Length = 361
Score = 59 bits (142), Expect = 7e-009
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Frame = -3
Query: 1353 QVIFPYDMEVETLIRLPGKSLMRFLCVSKTWYSLIRSQRFVASYY----AAKPPRFTVTF 1186
Q+ P D+++ L+RLP KSL+RF CVSK W S+I S F ++ ++ PPR + F
Sbjct: 9 QIYIPLDLQINILLRLPVKSLLRFRCVSKLWCSIITSHDFRNRHFNITSSSAPPRLLIAF 68
Query: 1185 TNSVFSEPKRLFIFSGEEEVTSSSS 1111
+ F K L + S V+SSS+
Sbjct: 69 QD--FYGEKLLLVSSPNPNVSSSST 91
>TAIR9_protein||AT5G62660.1 | Symbols: | F-box family protein |
chr5:25156326-25157465 REVERSE
Length = 380
Score = 59 bits (142), Expect = 7e-009
Identities = 34/90 (37%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Frame = -3
Query: 1341 PYDMEVETLIRLPGKSLMRFLCVSKTWYSLIRSQRFVASYYAAK----PPRFTVTFTNSV 1174
P D+ +E L +LP KSLMRF CVSK W SLIRS+ F Y K PPR ++ + +
Sbjct: 42 PLDLLIEILTKLPAKSLMRFKCVSKLWSSLIRSRFFSNCYLTVKTPRRPPRLYMSLVDHL 101
Query: 1173 FSEPKRLFIFSGEEEVTSSSSLVANLDMTI 1084
+ + E + SSSS +L+ +
Sbjct: 102 LCNSLMVCHYPCESVLLSSSSSAESLEQNL 131
>TAIR9_protein||AT1G70960.1 | Symbols: | F-box family protein |
chr1:26756253-26757362 FORWARD
Length = 370
Score = 55 bits (132), Expect = 1e-007
Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 21/162 (12%)
Frame = -3
Query: 1341 PYDMEVETLIRLPGKSLMRFLCVSKTWYSLIRSQRFVASY--YAAKPPR--FTVTFTNSV 1174
P M++E L R+P K LM+F+CVSK W S+IR + F Y + K PR F + +
Sbjct: 10 PRHMQMEILSRVPLKFLMKFMCVSKKWASIIRGEEFREDYLFQSMKRPRVLFVIDHREYL 69
Query: 1173 FSEPKRLFIFSGEEE---VTSSSSLVANLDMTIPSVTMPFGGYKYSSVHGFMAVNDRLKF 1003
+P+ F +E+ + S + + + V P G +G K
Sbjct: 70 PIKPEAFFHSVYQEDQPLLLSGKQRMRTFETPLVQVFQPIRGLICQQGYG--------KI 121
Query: 1002 IICNP------TTGQVITFHCKATDTCLGYDPVGDQFKALTL 895
+ICNP + Q+ T GYD D FK L +
Sbjct: 122 VICNPGLKKFRSLPQIKVHKGAPMRTFFGYDEDKDVFKVLCI 163
>TAIR9_protein||AT1G19160.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like
F-box (InterPro:IPR001810), F-box associated type 3
(InterPro:IPR013187), F-box associated type 1 (InterPro:IPR017451);
BEST Arabidopsis thaliana protein match is: F-box family protein
(TAIR:AT5G52610.1); Has 1084 Blast hits to 1065 proteins in 39 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1084;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr1:6614162-6615214 REVERSE
Length = 351
Score = 54 bits (127), Expect = 4e-007
Identities = 41/99 (41%), Positives = 51/99 (51%), Gaps = 15/99 (15%)
Frame = -3
Query: 1347 IFPYDMEVETLIRLPGKSLMRFLCVSKTWYSLIRSQRFVASYYAAKPPR-----FTVTFT 1183
+ P D VE L+RLP KSL RFLCVSK YS+IRS+ F+ Y + R F T
Sbjct: 1 MIPEDPLVEILLRLPVKSLARFLCVSKRCYSIIRSRHFINLYQSRASTRESRVMFAFRDT 60
Query: 1182 NSVFSEPKRLFIFSGEEEVTSSSSLVANLDMTIPSVTMP 1066
N+ F R FS ++ S V N+D T S MP
Sbjct: 61 NTFF----RWNFFS----LSQPPSSVTNIDST--SYCMP 89
>TAIR9_protein||AT1G32420.1 | Symbols: | F-box family protein |
chr1:11701995-11702903 FORWARD
Length = 303
Score = 52 bits (124), Expect = 8e-007
Identities = 33/85 (38%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Frame = -3
Query: 1377 VGSDKKILQVIFPYDMEVETLIRLPGKSLMRFLCVSKTWYSLIRSQR-----FVASYYAA 1213
+ + +K V P D+ VE L +LP KSL+RF CVSK W S+I S+R V
Sbjct: 26 ISAGEKSGNVNIPLDLTVEILKKLPAKSLLRFQCVSKQWLSIISSRRDFIDSIVTRSLTQ 85
Query: 1212 KPPR-FTVTFTNSVFSEPKRLFIFS 1141
PPR + F + V FIFS
Sbjct: 86 PPPRDIKLIFHHQVLYPGPHFFIFS 110
>TAIR9_protein||AT1G47800.1 | Symbols: | F-box family protein |
chr1:17601513-17602676 FORWARD
Length = 388
Score = 52 bits (124), Expect = 8e-007
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Frame = -3
Query: 1341 PYDMEVETLIRLPGKSLMRFLCVSKTWYSLIRSQRFVASYYA----AKPPRFTVTFTNSV 1174
P D+ E L++LP KS+ RFLCVSK W ++IR + F+ S+ + K PR + +
Sbjct: 15 PIDVLFEILVKLPAKSVARFLCVSKVWATMIRGEVFIRSFTSYSSPQKQPRLLFALVDCL 74
Query: 1173 FSEPKRLFIFS 1141
K L+ FS
Sbjct: 75 RLYNKMLYFFS 85
>TAIR9_protein||AT5G62510.1 | Symbols: | F-box family protein |
chr5:25095373-25096635 REVERSE
Length = 421
Score = 52 bits (123), Expect = 1e-006
Identities = 26/46 (56%), Positives = 29/46 (63%)
Frame = -3
Query: 1341 PYDMEVETLIRLPGKSLMRFLCVSKTWYSLIRSQRFVASYYAAKPP 1204
P D+ +E L RLP KSLMRF CVSK W SLIRS+ F Y P
Sbjct: 45 PLDLLIEILTRLPHKSLMRFKCVSKQWSSLIRSRFFSNRYLTVASP 90
>TAIR9_protein||AT5G44220.1 | Symbols: | F-box family protein |
chr5:17810477-17811364 FORWARD
Length = 296
Score = 52 bits (122), Expect = 1e-006
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 8/75 (10%)
Frame = -3
Query: 1347 IFPYDMEVETLIRLPGKSLMRFLCVSKTWYSLIRSQRFVASYY---AAKPPRFTVTFTNS 1177
+ P D+ E L RLP K+L RFLCVSK W S+IRS+ + + +A+P R TF
Sbjct: 61 LLPMDLIKEILKRLPAKTLARFLCVSKLWSSIIRSRDLMKLFLTESSARPGRLFFTFRRK 120
Query: 1176 VFSEPKRLFIFSGEE 1132
F+FS EE
Sbjct: 121 -----DDCFLFSSEE 130
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,602,906,079
Number of Sequences: 33410
Number of Extensions: 7602906079
Number of Successful Extensions: 254068823
Number of sequences better than 0.0: 0
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