BLASTX 7.6.2
Query= UN14520 /QuerySize=981
(980 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G55940.1 | Symbols: emb2731 | emb2731 (embryo ... 406 2e-113
TAIR9_protein||AT5G51620.3 | Symbols: | FUNCTIONS IN: molecular... 104 1e-022
TAIR9_protein||AT5G51620.2 | Symbols: | FUNCTIONS IN: molecular... 77 1e-014
TAIR9_protein||AT5G51620.1 | Symbols: | FUNCTIONS IN: molecular... 77 1e-014
>TAIR9_protein||AT5G55940.1 | Symbols: emb2731 | emb2731 (embryo defective 2731)
| chr5:22656256-22657894 REVERSE
Length = 209
Score = 406 bits (1041), Expect = 2e-113
Identities = 201/209 (96%), Positives = 206/209 (98%), Gaps = 1/209 (0%)
Frame = -2
Query: 868 GMGSNNGELKYEISQNAYIKLVLHSLRHKTAAVNGVLVGRISPKDEGLVEISDSVPLFHS 689
GMGS NGELKYEISQNAYIKLVLHSLRHKTAAVNGVLVGRISPKD+G+VEISDSVPLFHS
Sbjct: 2 GMGS-NGELKYEISQNAYIKLVLHSLRHKTAAVNGVLVGRISPKDDGVVEISDSVPLFHS 60
Query: 688 NLALLPPLEISLIMIEEHYVAQGLSIVGYFHANERFDDVDLCGVAKNIGDHISRYFPPAP 509
NLALLPPLEISLIMIEEHYVAQGLSIVGYFHANERFDDV+LCGVAKNIGDHISRYFP AP
Sbjct: 61 NLALLPPLEISLIMIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNIGDHISRYFPQAP 120
Query: 508 ILLLNNKKLEALSKGKDRSPVMQLCVKDASKNWRVVGADGGSKLLLKEPSANVVLSDYIS 329
ILLLNNKKLEALSKGK+RSPVMQLCVKDASKNWRVVGADGGSKLLLKEPSANVVLSDYIS
Sbjct: 121 ILLLNNKKLEALSKGKERSPVMQLCVKDASKNWRVVGADGGSKLLLKEPSANVVLSDYIS 180
Query: 328 SEKWKDVTDVDDHLDDITKDWLNPGLFN* 242
SEKWKDVTDVDDHLDD+TKDWLNPGLFN*
Sbjct: 181 SEKWKDVTDVDDHLDDVTKDWLNPGLFN* 209
>TAIR9_protein||AT5G51620.3 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0172 (InterPro:IPR005366); BEST
Arabidopsis thaliana protein match is: emb2731 (embryo defective 2731)
(TAIR:AT5G55940.1); Has 23 Blast hits to 23 proteins in 7 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr5:20967172-20967959 FORWARD
Length = 53
Score = 104 bits (257), Expect = 1e-022
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = -2
Query: 649 MIEEHYVAQGLSIVGYFHANERFDDVDLCGVAKNIGDHISRYFPPAPILL 500
MIEEHYVAQGLSIVGYFHANERFDDV+LCGVAKNIGDHISRYFP APILL
Sbjct: 1 MIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNIGDHISRYFPQAPILL 50
>TAIR9_protein||AT5G51620.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0172 (InterPro:IPR005366); BEST
Arabidopsis thaliana protein match is: emb2731 (embryo defective 2731)
(TAIR:AT5G55940.1); Has 28 Blast hits to 28 proteins in 6 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr5:20967172-20967984 FORWARD
Length = 69
Score = 77 bits (189), Expect = 1e-014
Identities = 39/54 (72%), Positives = 41/54 (75%)
Frame = -2
Query: 649 MIEEHYVAQGLSIVGYFHANERFDDVDLCGVAKNIGDHISRYFPPAPILLLNNK 488
MIEEHYVAQGLSIVGYFHANERFDDV+LCGVAKNIG R L +N K
Sbjct: 1 MIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNIGSKRLRVSSVPSKLKINAK 54
>TAIR9_protein||AT5G51620.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0172 (InterPro:IPR005366); BEST
Arabidopsis thaliana protein match is: emb2731 (embryo defective 2731)
(TAIR:AT5G55940.1); Has 22 Blast hits to 22 proteins in 6 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr5:20967172-20967741 FORWARD
Length = 51
Score = 77 bits (188), Expect = 1e-014
Identities = 35/36 (97%), Positives = 36/36 (100%)
Frame = -2
Query: 649 MIEEHYVAQGLSIVGYFHANERFDDVDLCGVAKNIG 542
MIEEHYVAQGLSIVGYFHANERFDDV+LCGVAKNIG
Sbjct: 1 MIEEHYVAQGLSIVGYFHANERFDDVELCGVAKNIG 36
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,602,906,079
Number of Sequences: 33410
Number of Extensions: 7602906079
Number of Successful Extensions: 254068823
Number of sequences better than 0.0: 0
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