BLASTX 7.6.2
Query= UN14534 /QuerySize=815
(814 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G32060.1 | Symbols: | 40S ribosomal protein S... 258 4e-069
TAIR9_protein||AT2G32060.3 | Symbols: | 40S ribosomal protein S... 258 4e-069
TAIR9_protein||AT2G32060.2 | Symbols: | 40S ribosomal protein S... 258 4e-069
TAIR9_protein||AT1G15930.2 | Symbols: | 40S ribosomal protein S... 255 4e-068
TAIR9_protein||AT1G15930.1 | Symbols: | 40S ribosomal protein S... 255 4e-068
>TAIR9_protein||AT2G32060.1 | Symbols: | 40S ribosomal protein S12 (RPS12C) |
chr2:13639228-13640104 REVERSE
Length = 145
Score = 258 bits (658), Expect = 4e-069
Identities = 126/145 (86%), Positives = 136/145 (93%)
Frame = +2
Query: 128 MSGEEAAAPVVVPPVAEPAAIPEDMDLLTALELTLRKSRAHGGVVRGLHESAKLIEKRVA 307
MSG+EA A VVPPVAE A IPEDMD+ TALELT+RKSRA+GGVVRGLHESAKLIEKR A
Sbjct: 1 MSGDEAVAAPVVPPVAEAAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNA 60
Query: 308 QLCVLAEDCNQPDYVKLVKALCADHNINLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 487
QLCVLAEDCNQPDYVKLVKALCADH+I LLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS
Sbjct: 61 QLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 120
Query: 488 CLVVKDYGEDTTALNIVKKHIESN* 562
CLV+KD+GE+TTALNIVKKH++SN*
Sbjct: 121 CLVIKDFGEETTALNIVKKHLDSN* 145
>TAIR9_protein||AT2G32060.3 | Symbols: | 40S ribosomal protein S12 (RPS12C) |
chr2:13639228-13640104 REVERSE
Length = 145
Score = 258 bits (658), Expect = 4e-069
Identities = 126/145 (86%), Positives = 136/145 (93%)
Frame = +2
Query: 128 MSGEEAAAPVVVPPVAEPAAIPEDMDLLTALELTLRKSRAHGGVVRGLHESAKLIEKRVA 307
MSG+EA A VVPPVAE A IPEDMD+ TALELT+RKSRA+GGVVRGLHESAKLIEKR A
Sbjct: 1 MSGDEAVAAPVVPPVAEAAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNA 60
Query: 308 QLCVLAEDCNQPDYVKLVKALCADHNINLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 487
QLCVLAEDCNQPDYVKLVKALCADH+I LLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS
Sbjct: 61 QLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 120
Query: 488 CLVVKDYGEDTTALNIVKKHIESN* 562
CLV+KD+GE+TTALNIVKKH++SN*
Sbjct: 121 CLVIKDFGEETTALNIVKKHLDSN* 145
>TAIR9_protein||AT2G32060.2 | Symbols: | 40S ribosomal protein S12 (RPS12C) |
chr2:13639228-13640104 REVERSE
Length = 145
Score = 258 bits (658), Expect = 4e-069
Identities = 126/145 (86%), Positives = 136/145 (93%)
Frame = +2
Query: 128 MSGEEAAAPVVVPPVAEPAAIPEDMDLLTALELTLRKSRAHGGVVRGLHESAKLIEKRVA 307
MSG+EA A VVPPVAE A IPEDMD+ TALELT+RKSRA+GGVVRGLHESAKLIEKR A
Sbjct: 1 MSGDEAVAAPVVPPVAEAAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNA 60
Query: 308 QLCVLAEDCNQPDYVKLVKALCADHNINLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 487
QLCVLAEDCNQPDYVKLVKALCADH+I LLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS
Sbjct: 61 QLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 120
Query: 488 CLVVKDYGEDTTALNIVKKHIESN* 562
CLV+KD+GE+TTALNIVKKH++SN*
Sbjct: 121 CLVIKDFGEETTALNIVKKHLDSN* 145
>TAIR9_protein||AT1G15930.2 | Symbols: | 40S ribosomal protein S12 (RPS12A) |
chr1:5471702-5472741 FORWARD
Length = 145
Score = 255 bits (649), Expect = 4e-068
Identities = 126/145 (86%), Positives = 134/145 (92%)
Frame = +2
Query: 128 MSGEEAAAPVVVPPVAEPAAIPEDMDLLTALELTLRKSRAHGGVVRGLHESAKLIEKRVA 307
MSG+EAA VV PPVAEPAAIPEDMDL+TALELTLRK+RA+GGVVRGLHE AKLIEKRVA
Sbjct: 1 MSGDEAAPVVVPPPVAEPAAIPEDMDLMTALELTLRKARAYGGVVRGLHECAKLIEKRVA 60
Query: 308 QLCVLAEDCNQPDYVKLVKALCADHNINLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 487
QL VLAEDCNQPDYVKLVKALCADH + LLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS
Sbjct: 61 QLVVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 120
Query: 488 CLVVKDYGEDTTALNIVKKHIESN* 562
CLVVKD+GE+TTAL+IV KHI S *
Sbjct: 121 CLVVKDFGEETTALSIVNKHIASQ* 145
>TAIR9_protein||AT1G15930.1 | Symbols: | 40S ribosomal protein S12 (RPS12A) |
chr1:5471702-5472741 FORWARD
Length = 145
Score = 255 bits (649), Expect = 4e-068
Identities = 126/145 (86%), Positives = 134/145 (92%)
Frame = +2
Query: 128 MSGEEAAAPVVVPPVAEPAAIPEDMDLLTALELTLRKSRAHGGVVRGLHESAKLIEKRVA 307
MSG+EAA VV PPVAEPAAIPEDMDL+TALELTLRK+RA+GGVVRGLHE AKLIEKRVA
Sbjct: 1 MSGDEAAPVVVPPPVAEPAAIPEDMDLMTALELTLRKARAYGGVVRGLHECAKLIEKRVA 60
Query: 308 QLCVLAEDCNQPDYVKLVKALCADHNINLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 487
QL VLAEDCNQPDYVKLVKALCADH + LLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS
Sbjct: 61 QLVVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 120
Query: 488 CLVVKDYGEDTTALNIVKKHIESN* 562
CLVVKD+GE+TTAL+IV KHI S *
Sbjct: 121 CLVVKDFGEETTALSIVNKHIASQ* 145
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,602,906,079
Number of Sequences: 33410
Number of Extensions: 7602906079
Number of Successful Extensions: 254068823
Number of sequences better than 0.0: 0
|