BLASTX 7.6.2
Query= UN14770 /QuerySize=1763
(1762 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G53110.1 | Symbols: LOS4 | LOS4 (LOW EXPRESSIO... 844 6e-245
TAIR9_protein||AT1G72730.1 | Symbols: | eukaryotic translation ... 224 2e-058
TAIR9_protein||AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4... 221 2e-057
TAIR9_protein||AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4... 220 3e-057
TAIR9_protein||AT1G54270.1 | Symbols: EIF4A-2 | EIF4A-2; ATP-dep... 218 1e-056
TAIR9_protein||AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4... 213 4e-055
TAIR9_protein||AT1G51380.1 | Symbols: | eukaryotic translation ... 201 1e-051
TAIR9_protein||AT5G63120.2 | Symbols: | ethylene-responsive DEA... 164 3e-040
TAIR9_protein||AT2G47330.1 | Symbols: | DEAD/DEAH box helicase,... 157 2e-038
TAIR9_protein||AT1G31970.1 | Symbols: STRS1 | STRS1 (STRESS RESP... 157 3e-038
TAIR9_protein||AT2G42520.1 | Symbols: | DEAD box RNA helicase, ... 148 1e-035
TAIR9_protein||AT2G33730.1 | Symbols: | DEAD box RNA helicase, ... 146 5e-035
TAIR9_protein||AT3G58510.1 | Symbols: | DEAD box RNA helicase, ... 144 2e-034
TAIR9_protein||AT3G58510.2 | Symbols: | DEAD box RNA helicase, ... 144 2e-034
TAIR9_protein||AT3G58510.3 | Symbols: | DEAD box RNA helicase, ... 144 2e-034
TAIR9_protein||AT1G55150.1 | Symbols: | DEAD box RNA helicase, ... 144 3e-034
TAIR9_protein||AT5G11200.1 | Symbols: | DEAD/DEAH box helicase,... 143 4e-034
TAIR9_protein||AT5G11170.2 | Symbols: | ATP binding / ATP-depen... 143 4e-034
TAIR9_protein||AT5G11170.1 | Symbols: | ATP binding / ATP-depen... 143 4e-034
TAIR9_protein||AT3G58570.1 | Symbols: | DEAD box RNA helicase, ... 142 8e-034
>TAIR9_protein||AT3G53110.1 | Symbols: LOS4 | LOS4 (LOW EXPRESSION OF
OSMOTICALLY RESPONSIVE GENES 4); ATP-dependent helicase/ RNA helicase/
RNA-dependent ATPase | chr3:19687968-19690423 FORWARD
Length = 497
Score = 844 bits (2178), Expect = 6e-245
Identities = 434/501 (86%), Positives = 465/501 (92%), Gaps = 10/501 (1%)
Frame = -1
Query: 1660 TIDKLPT--GEASSSSVEASITGENTEPTTTTTTTEKTKRGDVEDDDEEEANAVSELNSL 1487
T++K+PT +SSS+VEAS + E TEP TTEK K GDVEDDD+EE AVSELNSL
Sbjct: 4 TVEKVPTVVESSSSSTVEASNSAEKTEP-----TTEKKKWGDVEDDDDEE-EAVSELNSL 57
Query: 1486 SIKEEEKHESILDEPEDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSK 1307
SIKEEEK +SIL+EPEDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSK
Sbjct: 58 SIKEEEKPDSILEEPEDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSK 117
Query: 1306 IQAISLPMIITPPHKHLIAQAHNGSGKTTCFVLGMLSRVDPSLRQPQALCICPTRELANQ 1127
IQAISLPMI+TPPHKHLIAQAHNGSGKTTCFVLGMLSRVDP+LR+PQALCICPTRELANQ
Sbjct: 118 IQAISLPMIMTPPHKHLIAQAHNGSGKTTCFVLGMLSRVDPTLREPQALCICPTRELANQ 177
Query: 1126 NMEVLQKMGKFTGITAEVAVPESNQGGNFARR-APVSAQVVIGTPGTLKKWMAFKKLGLN 950
NMEVLQKMGKFTGITAE+AVP+S +G A R APVSA VVIGTPGTLKKWMAFK+LGLN
Sbjct: 178 NMEVLQKMGKFTGITAELAVPDSTRGAPAATRGAPVSAHVVIGTPGTLKKWMAFKRLGLN 237
Query: 949 HLKILVFDEADHMLATDGFRDDSLRIMKDIERVNPNYQVLLFSATFNDNVKDFVQRTLKK 770
HLKILVFDEADHMLATDGFRDDSL+IMKDI RVNPN+QVLLFSATFN+ VKDFV RT+ K
Sbjct: 238 HLKILVFDEADHMLATDGFRDDSLKIMKDIGRVNPNFQVLLFSATFNETVKDFVARTV-K 296
Query: 769 SPNQLFVKREDLALDSVKQYKVVCPKEQDKIEVIKDQIMELGDIGQTIIFVKTKVSASKV 590
PNQLFVKREDLALDSVKQYKVVCPKEQ+KIEVIKDQIMELGDIGQTIIFVKTK SA KV
Sbjct: 297 DPNQLFVKREDLALDSVKQYKVVCPKEQNKIEVIKDQIMELGDIGQTIIFVKTKASAQKV 356
Query: 589 HKALAEMGYDVTSVHGSMTQEERDKIVKEFKDCLTQVLIATDVLARGFDQQRVNLVVNYN 410
HKALAEMGYDVTSVHG++T+ +RDKIVKEFK+CLTQVLIATDV+ARGFDQQRVNLVVNYN
Sbjct: 357 HKALAEMGYDVTSVHGNLTESDRDKIVKEFKECLTQVLIATDVIARGFDQQRVNLVVNYN 416
Query: 409 MPTKYETGEPDYEVYLHRVGRAGRFGRKGAVFNLLLENGDDKEVMEKIERYFGAQVKEIK 230
+PTKYETGEPDYEVYLHRVGRAGRFGRKGAVFNLLL++G DKEVMEKIE+YF A VKEIK
Sbjct: 417 LPTKYETGEPDYEVYLHRVGRAGRFGRKGAVFNLLLDDGWDKEVMEKIEKYFEANVKEIK 476
Query: 229 SWNSEEEYKSALKEAGLLDE* 167
SWNSEEEYKSALKEAGLLDE*
Sbjct: 477 SWNSEEEYKSALKEAGLLDE* 497
>TAIR9_protein||AT1G72730.1 | Symbols: | eukaryotic translation initiation
factor 4A, putative / eIF-4A, putative | chr1:27378040-27379593
REVERSE
Length = 415
Score = 224 bits (569), Expect = 2e-058
Identities = 146/390 (37%), Positives = 226/390 (57%), Gaps = 33/390 (8%)
Frame = -1
Query: 1381 FEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIITPPHKHL--IAQAHNGSGKTTCFVL 1208
F+ + L P+L++G+Y FEKPS IQ I P K L I QA +G+GKT F
Sbjct: 43 FDAMELQPDLLRGIYA-YGFEKPSAIQQRG----IIPFCKGLDVIQQAQSGTGKTATFCS 97
Query: 1207 GMLSRVDPSLRQPQALCICPTRELANQNMEVLQKMGKFTGITAEVAVPESNQGGNFARR- 1031
G+L ++D SL Q QAL + PTRELA Q +V++ +G + G+ A+ V GG R
Sbjct: 98 GVLQQLDISLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQACV-----GGTSVRED 152
Query: 1030 ---APVSAQVVIGTPGTLKKWMAFKKLGLNHLKILVFDEADHMLATDGFRDDSLRIMKDI 860
VV+GTPG + + + L + +K+ V DEAD ML+ GF+D + DI
Sbjct: 153 QRVLQSGVHVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSR-GFKDQ----IYDI 207
Query: 859 ERVNPN-YQVLLFSATFNDNVKDFVQRTLKKSPNQLFVKREDLALDSVKQYKVVCPKEQD 683
++ P+ QV +FSAT + ++ + K P ++ VKR++L L+ +KQ+ V KE+
Sbjct: 208 FQLLPSKVQVGVFSATMPPEALEITRKFMNK-PVRILVKRDELTLEGIKQFYVNVDKEEW 266
Query: 682 KIEVIKDQIMELGDIGQTIIFVKTKVSASKVHKALAEMGYDVTSVHGSMTQEERDKIVKE 503
K+E + D + E I Q++IFV T+ + + + V++ HG M Q RD I++E
Sbjct: 267 KLETLCD-LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMRE 325
Query: 502 FKDCLTQVLIATDVLARGFDQQRVNLVVNYNMPTKYETGEPDYEVYLHRVGRAGRFGRKG 323
F+ ++VLI TD+LARG D Q+V+LV+N+++PT+ E YLHR+GR+GRFGRKG
Sbjct: 326 FRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPEN-------YLHRIGRSGRFGRKG 378
Query: 322 AVFNLLLENGDDKEVMEKIERYFGAQVKEI 233
N + +D+ +M I+R++ V+E+
Sbjct: 379 VAINFM--TSEDERMMADIQRFYNVVVEEL 406
>TAIR9_protein||AT3G13920.1 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4A1 (EUKARYOTIC
TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation
initiation factor | chr3:4592635-4594128 REVERSE
Length = 413
Score = 221 bits (561), Expect = 2e-057
Identities = 148/413 (35%), Positives = 231/413 (55%), Gaps = 34/413 (8%)
Frame = -1
Query: 1453 LDEPEDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIIT 1274
L+E + + TS D + S F+ + L L++G+Y FEKPS IQ I
Sbjct: 20 LNEVLEGQDEFFTSYDDVHES---FDAMGLQENLLRGIYA-YGFEKPSAIQQRG----IV 71
Query: 1273 PPHKHL--IAQAHNGSGKTTCFVLGMLSRVDPSLRQPQALCICPTRELANQNMEVLQKMG 1100
P K L I QA +G+GKT F G+L ++D SL Q QAL + PTRELA Q +V++ +G
Sbjct: 72 PFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALG 131
Query: 1099 KFTGITAEVAVPESNQGGNFARR----APVSAQVVIGTPGTLKKWMAFKKLGLNHLKILV 932
+ G+ V GG R VV+GTPG + + + L +++K+ V
Sbjct: 132 DYLGVKVHACV-----GGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFV 186
Query: 931 FDEADHMLATDGFRDDSLRIMKDIERVNPNYQVLLFSATFNDNVKDFVQRTLKKSPNQLF 752
DEAD ML+ GF+D +I + + P QV +FSAT + ++ + K P ++
Sbjct: 187 LDEADEMLSR-GFKD---QIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSK-PVRIL 241
Query: 751 VKREDLALDSVKQYKVVCPKEQDKIEVIKDQIMELGDIGQTIIFVKTKVSASKVHKALAE 572
VKR++L L+ +KQ+ V KE+ K+E + D + E I Q++IFV T+ + +
Sbjct: 242 VKRDELTLEGIKQFYVNVEKEEWKLETLCD-LYETLAITQSVIFVNTRRKVDWLTDKMRS 300
Query: 571 MGYDVTSVHGSMTQEERDKIVKEFKDCLTQVLIATDVLARGFDQQRVNLVVNYNMPTKYE 392
+ V++ HG M Q RD I++EF+ ++VLI TD+LARG D Q+V+LV+N+++PT+ E
Sbjct: 301 RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPE 360
Query: 391 TGEPDYEVYLHRVGRAGRFGRKGAVFNLLLENGDDKEVMEKIERYFGAQVKEI 233
YLHR+GR+GRFGRKG N + DD+ ++ I++++ V+E+
Sbjct: 361 N-------YLHRIGRSGRFGRKGVAINFVTR--DDERMLFDIQKFYNVVVEEL 404
>TAIR9_protein||AT3G13920.3 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4A1 (EUKARYOTIC
TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation
initiation factor | chr3:4592635-4594094 REVERSE
Length = 403
Score = 220 bits (559), Expect = 3e-057
Identities = 142/389 (36%), Positives = 221/389 (56%), Gaps = 31/389 (7%)
Frame = -1
Query: 1381 FEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIITPPHKHL--IAQAHNGSGKTTCFVL 1208
F+ + L L++G+Y FEKPS IQ I P K L I QA +G+GKT F
Sbjct: 31 FDAMGLQENLLRGIYA-YGFEKPSAIQQRG----IVPFCKGLDVIQQAQSGTGKTATFCS 85
Query: 1207 GMLSRVDPSLRQPQALCICPTRELANQNMEVLQKMGKFTGITAEVAVPESNQGGNFARR- 1031
G+L ++D SL Q QAL + PTRELA Q +V++ +G + G+ V GG R
Sbjct: 86 GVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-----GGTSVRED 140
Query: 1030 ---APVSAQVVIGTPGTLKKWMAFKKLGLNHLKILVFDEADHMLATDGFRDDSLRIMKDI 860
VV+GTPG + + + L +++K+ V DEAD ML+ GF+D +I
Sbjct: 141 QRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFVLDEADEMLSR-GFKD---QIYDIF 196
Query: 859 ERVNPNYQVLLFSATFNDNVKDFVQRTLKKSPNQLFVKREDLALDSVKQYKVVCPKEQDK 680
+ + P QV +FSAT + ++ + K P ++ VKR++L L+ +KQ+ V KE+ K
Sbjct: 197 QLLPPKIQVGVFSATMPPEALEITRKFMSK-PVRILVKRDELTLEGIKQFYVNVEKEEWK 255
Query: 679 IEVIKDQIMELGDIGQTIIFVKTKVSASKVHKALAEMGYDVTSVHGSMTQEERDKIVKEF 500
+E + D + E I Q++IFV T+ + + + V++ HG M Q RD I++EF
Sbjct: 256 LETLCD-LYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREF 314
Query: 499 KDCLTQVLIATDVLARGFDQQRVNLVVNYNMPTKYETGEPDYEVYLHRVGRAGRFGRKGA 320
+ ++VLI TD+LARG D Q+V+LV+N+++PT+ E YLHR+GR+GRFGRKG
Sbjct: 315 RSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPEN-------YLHRIGRSGRFGRKGV 367
Query: 319 VFNLLLENGDDKEVMEKIERYFGAQVKEI 233
N + DD+ ++ I++++ V+E+
Sbjct: 368 AINFVTR--DDERMLFDIQKFYNVVVEEL 394
>TAIR9_protein||AT1G54270.1 | Symbols: EIF4A-2 | EIF4A-2; ATP-dependent
helicase/ translation initiation factor | chr1:20260495-20262018
FORWARD
Length = 413
Score = 218 bits (553), Expect = 1e-056
Identities = 148/413 (35%), Positives = 229/413 (55%), Gaps = 34/413 (8%)
Frame = -1
Query: 1453 LDEPEDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIIT 1274
L+E D + TS D + S F+ + L L++G+Y FEKPS IQ I
Sbjct: 20 LNEVLDGQDEFFTSYDEVHES---FDAMGLQENLLRGIYA-YGFEKPSAIQQRG----IV 71
Query: 1273 PPHKHL--IAQAHNGSGKTTCFVLGMLSRVDPSLRQPQALCICPTRELANQNMEVLQKMG 1100
P K L I QA +G+GKT F G+L ++D +L Q QAL + PTRELA Q +V++ +G
Sbjct: 72 PFCKGLDVIQQAQSGTGKTATFCSGVLQQLDYALLQCQALVLAPTRELAQQIEKVMRALG 131
Query: 1099 KFTGITAEVAVPESNQGGNFARR----APVSAQVVIGTPGTLKKWMAFKKLGLNHLKILV 932
+ G+ V GG R VV+GTPG + + + L + +K+ V
Sbjct: 132 DYQGVKVHACV-----GGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDCIKMFV 186
Query: 931 FDEADHMLATDGFRDDSLRIMKDIERVNPNYQVLLFSATFNDNVKDFVQRTLKKSPNQLF 752
DEAD ML+ GF+D +I + + P QV +FSAT + ++ + K P ++
Sbjct: 187 LDEADEMLSR-GFKD---QIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSK-PVRIL 241
Query: 751 VKREDLALDSVKQYKVVCPKEQDKIEVIKDQIMELGDIGQTIIFVKTKVSASKVHKALAE 572
VKR++L L+ +KQ+ V KE K+E + D + E I Q++IFV T+ + +
Sbjct: 242 VKRDELTLEGIKQFYVNVEKEDWKLETLCD-LYETLAITQSVIFVNTRRKVDWLTDKMRS 300
Query: 571 MGYDVTSVHGSMTQEERDKIVKEFKDCLTQVLIATDVLARGFDQQRVNLVVNYNMPTKYE 392
+ V++ HG M Q RD I++EF+ ++VLI TD+LARG D Q+V+LV+N+++PT+ E
Sbjct: 301 RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPE 360
Query: 391 TGEPDYEVYLHRVGRAGRFGRKGAVFNLLLENGDDKEVMEKIERYFGAQVKEI 233
YLHR+GR+GRFGRKG N + DD+ ++ I++++ V+E+
Sbjct: 361 N-------YLHRIGRSGRFGRKGVAINFV--TLDDQRMLFDIQKFYNVVVEEL 404
>TAIR9_protein||AT3G13920.2 | Symbols: EIF4A1, RH4, TIF4A1 | EIF4A1 (EUKARYOTIC
TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation
initiation factor | chr3:4592586-4594128 REVERSE
Length = 416
Score = 213 bits (541), Expect = 4e-055
Identities = 145/399 (36%), Positives = 222/399 (55%), Gaps = 34/399 (8%)
Frame = -1
Query: 1453 LDEPEDSNIKAVTSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIIT 1274
L+E + + TS D + S F+ + L L++G+Y FEKPS IQ I
Sbjct: 20 LNEVLEGQDEFFTSYDDVHES---FDAMGLQENLLRGIYA-YGFEKPSAIQQRG----IV 71
Query: 1273 PPHKHL--IAQAHNGSGKTTCFVLGMLSRVDPSLRQPQALCICPTRELANQNMEVLQKMG 1100
P K L I QA +G+GKT F G+L ++D SL Q QAL + PTRELA Q +V++ +G
Sbjct: 72 PFCKGLDVIQQAQSGTGKTATFCSGVLQQLDFSLIQCQALVLAPTRELAQQIEKVMRALG 131
Query: 1099 KFTGITAEVAVPESNQGGNFARR----APVSAQVVIGTPGTLKKWMAFKKLGLNHLKILV 932
+ G+ V GG R VV+GTPG + + + L +++K+ V
Sbjct: 132 DYLGVKVHACV-----GGTSVREDQRILQAGVHVVVGTPGRVFDMLKRQSLRADNIKMFV 186
Query: 931 FDEADHMLATDGFRDDSLRIMKDIERVNPNYQVLLFSATFNDNVKDFVQRTLKKSPNQLF 752
DEAD ML+ GF+D +I + + P QV +FSAT + ++ + K P ++
Sbjct: 187 LDEADEMLSR-GFKD---QIYDIFQLLPPKIQVGVFSATMPPEALEITRKFMSK-PVRIL 241
Query: 751 VKREDLALDSVKQYKVVCPKEQDKIEVIKDQIMELGDIGQTIIFVKTKVSASKVHKALAE 572
VKR++L L+ +KQ+ V KE+ K+E + D + E I Q++IFV T+ + +
Sbjct: 242 VKRDELTLEGIKQFYVNVEKEEWKLETLCD-LYETLAITQSVIFVNTRRKVDWLTDKMRS 300
Query: 571 MGYDVTSVHGSMTQEERDKIVKEFKDCLTQVLIATDVLARGFDQQRVNLVVNYNMPTKYE 392
+ V++ HG M Q RD I++EF+ ++VLI TD+LARG D Q+V+LV+N+++PT+ E
Sbjct: 301 RDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINFDLPTQPE 360
Query: 391 TGEPDYEVYLHRVGRAGRFGRKGAVFNLLLENGDDKEVM 275
YLHR+GR+GRFGRKG N + DD+ ++
Sbjct: 361 N-------YLHRIGRSGRFGRKGVAINFVTR--DDERML 390
>TAIR9_protein||AT1G51380.1 | Symbols: | eukaryotic translation initiation
factor 4A, putative / eIF-4A, putative | chr1:19047960-19049967
FORWARD
Length = 393
Score = 201 bits (511), Expect = 1e-051
Identities = 130/394 (32%), Positives = 221/394 (56%), Gaps = 24/394 (6%)
Frame = -1
Query: 1417 TSGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIITPPHKHLIAQAHN 1238
T G P S F+D+ ++ ++++G+Y + ++KPS+IQ +L I+ + +IAQA +
Sbjct: 15 TKGIKPIKS---FDDMGMNDKVLRGVY-DYGYKKPSEIQQRALVPIL--KGRDVIAQAQS 68
Query: 1237 GSGKTTCFVLGMLSRVDPSLRQPQALCICPTRELANQNMEVLQKMGKFTGITAEVAVPES 1058
G+GKT+ + + V+ S R+ Q L + P+RELA+Q + +Q +G T I A +
Sbjct: 69 GTGKTSMIAISVCQIVNISSRKVQVLVLSPSRELASQTEKTIQAIGAHTNIQAHACIGGK 128
Query: 1057 NQGGNFARRAPVSAQVVIGTPGTLKKWMAFKKLGLNHLKILVFDEADHMLATDGFRDDSL 878
+ G + ++ V GTPG + + L +K+LV DE+D ML + G +D
Sbjct: 129 SIGEDI-KKLERGVHAVSGTPGRVYDMIKRGSLQTKAVKLLVLDESDEML-SKGLKDQ-- 184
Query: 877 RIMKDIERVNP-NYQVLLFSATFNDNVKDFVQRTLKKSPNQLFVKREDLALDSVKQYKVV 701
+ D+ R P + QV L SAT + + ++ + P ++ VK ++L L+ +KQY V
Sbjct: 185 --IYDVYRALPHDIQVCLISATLPQEILEMTEKFM-TDPVRILVKPDELTLEGIKQYYVD 241
Query: 700 CPKEQDKIEVIKDQIMELGDIGQTIIFVKTKVSASKVHKALAEMGYDVTSVHGSMTQEER 521
KE+ K + + D L I Q IIF T+ + + + + V+S+HG Q+ER
Sbjct: 242 VDKEEWKFDTLCDLYGRL-TINQAIIFCNTRQKVDWLTEKMRSSNFIVSSMHGDKRQKER 300
Query: 520 DKIVKEFKDCLTQVLIATDVLARGFDQQRVNLVVNYNMPTKYETGEPDYEVYLHRVGRAG 341
D I+ +F+ ++VLIA+DV ARG D Q V+ V+NY++P + E+Y+HR+GRAG
Sbjct: 301 DDIMNQFRSFKSRVLIASDVWARGIDVQTVSHVINYDIPN-------NPELYIHRIGRAG 353
Query: 340 RFGRKGAVFNLLLENGDDKEVMEKIERYFGAQVK 239
RFGR+G N + D + ++ IER++G +++
Sbjct: 354 RFGREGVAINFV--KSSDMKDLKDIERHYGTKIR 385
>TAIR9_protein||AT5G63120.2 | Symbols: | ethylene-responsive DEAD box RNA
helicase, putative (RH30) | chr5:25318967-25322071 REVERSE
Length = 592
Score = 164 bits (413), Expect = 3e-040
Identities = 120/362 (33%), Positives = 183/362 (50%), Gaps = 23/362 (6%)
Frame = -1
Query: 1381 FEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIITPPHKHLIAQAHNGSGKTTCFVLGM 1202
F+D N +++ + ++ F +P+ IQA PM + + LI A GSGKT ++L
Sbjct: 167 FQDANFPDNILEAI-AKLGFTEPTPIQAQGWPMAL--KGRDLIGIAETGSGKTLAYLLPA 223
Query: 1201 LSRV--DPSLRQ---PQALCICPTRELANQNMEVLQKMGKFTGITAEVAVPESNQGGNFA 1037
L V P L Q P L + PTRELA Q E +K G +G+ + + +G
Sbjct: 224 LVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPKGPQI- 282
Query: 1036 RRAPVSAQVVIGTPGTLKKWMAFKKLGLNHLKILVFDEADHMLATDGFRDDSLRIMKDIE 857
R ++VI TPG L + + L + LV DEAD ML GF +I K +
Sbjct: 283 RDLRRGVEIVIATPGRLIDMLECQHTNLKRVTYLVLDEADRMLDM-GFEP---QIRKIVS 338
Query: 856 RVNPNYQVLLFSATFNDNVKDFVQRTLKKSPNQLFVKREDL-ALDSVKQYKVVCPKEQDK 680
++ P+ Q LL+SAT+ V+ ++ L + P + + DL A S+ Q + P +K
Sbjct: 339 QIRPDRQTLLWSATWPREVETLARQFL-RDPYKAIIGSTDLKANQSINQVIEIVP-TPEK 396
Query: 679 IEVIKDQIMELGDIGQTIIFVKTKVSASKVHKALAEMGYDVTSVHGSMTQEERDKIVKEF 500
+ + +L D + +IFV+TK +V + L G+ ++HG TQ ERD+++ EF
Sbjct: 397 YNRLLTLLKQLMDGSKILIFVETKRGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEF 456
Query: 499 KDCLTQVLIATDVLARGFDQQRVNLVVNYNMPTKYETGEPDYEVYLHRVGRAGRFGRKGA 320
K + ++ ATDV ARG D + + VVNY+ P E Y+HR+GR GR G KG
Sbjct: 457 KSGRSPIMTATDVAARGLDVKDIKCVVNYDFPNTLED-------YIHRIGRTGRAGAKGM 509
Query: 319 VF 314
F
Sbjct: 510 AF 511
>TAIR9_protein||AT2G47330.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr2:19429083-19431617 REVERSE
Length = 761
Score = 157 bits (396), Expect = 2e-038
Identities = 110/378 (29%), Positives = 187/378 (49%), Gaps = 22/378 (5%)
Frame = -1
Query: 1414 SGDTPYTSASRFEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIITPPHKHLIAQAHNG 1235
SG + FED S ++M + + +EKP+ IQ +LP++++ + +I A G
Sbjct: 219 SGFDVHRPVKTFEDCGFSSQIMSAI-KKQAYEKPTAIQCQALPIVLS--GRDVIGIAKTG 275
Query: 1234 SGKTTCFVLGMLSRV--DPSLRQ---PQALCICPTRELANQNMEVLQKMGKFTGITAEVA 1070
SGKT FVL M+ + P L++ P + PTRELA+Q +K K G+
Sbjct: 276 SGKTAAFVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAV 335
Query: 1069 VPESNQGGNFARRAPVSAQVVIGTPGTLKKWMAFKKLGLNHLKILVFDEADHMLATDGFR 890
++ F + ++V+ TPG L + K L + LV DEAD M GF
Sbjct: 336 YGGMSKHEQF-KELKAGCEIVVATPGRLIDMLKMKALTMMRASYLVLDEADRMFDL-GFE 393
Query: 889 DDSLRIMKDIERVNPNYQVLLFSATFNDNVKDFVQRTLKKSPNQLFVKREDLALDSVKQY 710
++ + ++ P+ Q LLFSAT V+ + R + P ++ V +A + + Q
Sbjct: 394 P---QVRSIVGQIRPDRQTLLFSATMPWKVEK-LAREILSDPIRVTVGEVGMANEDITQV 449
Query: 709 KVVCPKEQDKIEVIKDQIMELGDIGQTIIFVKTKVSASKVHKALAEMGYDVTSVHGSMTQ 530
V P + +K+ + +++ + D G ++F K + ++ L + V ++HG Q
Sbjct: 450 VNVIPSDAEKLPWLLEKLPGMIDEGDVLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQ 509
Query: 529 EERDKIVKEFKDCLTQVLIATDVLARGFDQQRVNLVVNYNMPTKYETGEPDYEVYLHRVG 350
R + +++FK + VLIATDV ARG D + + VVNY++ D ++++HR+G
Sbjct: 510 ASRMETLQKFKSGVHHVLIATDVAARGLDIKSLKTVVNYDI-------AKDMDMHVHRIG 562
Query: 349 RAGRFG-RKGAVFNLLLE 299
R GR G R G + L+ +
Sbjct: 563 RTGRAGDRDGVAYTLVTQ 580
>TAIR9_protein||AT1G31970.1 | Symbols: STRS1 | STRS1 (STRESS RESPONSE SUPPRESSOR
1); ATP binding / ATP-dependent helicase/ helicase/ nucleic acid
binding | chr1:11479921-11482707 FORWARD
Length = 538
Score = 157 bits (395), Expect = 3e-038
Identities = 134/461 (29%), Positives = 215/461 (46%), Gaps = 39/461 (8%)
Frame = -1
Query: 1642 TGEASSSSVEASITGENTE----PTTTTTTTEKTKRGDVEDDDEEEANAVSELNSLSIKE 1475
T + S + T EN E P T E+ + + SE N
Sbjct: 22 TNKKKKKSKKNKHTEENHEVEEVPQEVTNGVEEELSNKEKKKKRKREEKESEKNKKKDVP 81
Query: 1474 EEKHES-ILDEPEDSNIKAVTSG----DTPYTSASRFEDLNLSPELMKGLYVEMKFEKPS 1310
E+K E+ L E E K V +G + Y + F + NL ++ FEKPS
Sbjct: 82 EKKLEAEDLGEGESEQQKVVVTGKGVEEAKYAALKTFAESNLPENVLDCC---KTFEKPS 138
Query: 1309 KIQAISLPMIITPPHKHLIAQAHNGSGKTTCFVLGMLSRVDPSLRQ---------PQALC 1157
IQ+ + P ++ + LI A GSGKT F + + V ++ P L
Sbjct: 139 PIQSHTWPFLL--DGRDLIGIAKTGSGKTLAFGIPAIMHVLKKNKKIGGGSKKVNPTCLV 196
Query: 1156 ICPTRELANQNMEVLQKMGKFTGITAEVAVPESNQGGNF-ARRAPVSAQVVIGTPGTLKK 980
+ PTRELA Q +VL++ G+ G+ + S++G A R+ V +VIGTPG L+
Sbjct: 197 LSPTRELAVQISDVLREAGEPCGLKSICVYGGSSKGPQISAIRSGV--DIVIGTPGRLRD 254
Query: 979 WMAFKKLGLNHLKILVFDEADHMLATDGFRDDSLRIMKDIERVNPNYQVLLFSATFNDNV 800
+ L L+ + +V DEAD ML GF + I+ + +V Q+++FSAT+ +V
Sbjct: 255 LIESNVLRLSDVSFVVLDEADRMLDM-GFEEPVRFILSNTNKVR---QMVMFSATWPLDV 310
Query: 799 KDFVQRTLKKSPNQLFVKREDLAL--DSVKQYKVVCPKEQDKIEVIKDQIMELGDIGQTI 626
Q + +P ++ + DLA D ++ +V+ + +D+ + + + +
Sbjct: 311 HKLAQEFMDPNPIKVIIGSVDLAANHDVMQIIEVLDERARDQRLIALLEKYHKSQKNRVL 370
Query: 625 IFVKTKVSASKVHKALAEMGYDVTSVHGSMTQEERDKIVKEFKDCLTQVLIATDVLARGF 446
+F KV A ++ + L + G+ S+HG+ Q ER + + FK+ +L+ATDV ARG
Sbjct: 371 VFALYKVEAERLERFLQQRGWKAVSIHGNKAQSERTRSLSLFKEGSCPLLVATDVAARGL 430
Query: 445 DQQRVNLVVNYNMPTKYETGEPDYEVYLHRVGRAGRFGRKG 323
D V +V+NY P E Y+HR+GR GR G+KG
Sbjct: 431 DIPDVEVVINYTFPLTTED-------YVHRIGRTGRAGKKG 464
>TAIR9_protein||AT2G42520.1 | Symbols: | DEAD box RNA helicase, putative |
chr2:17705382-17708744 FORWARD
Length = 634
Score = 148 bits (372), Expect = 1e-035
Identities = 114/366 (31%), Positives = 184/366 (50%), Gaps = 47/366 (12%)
Frame = -1
Query: 1327 KFEKPSKIQAISLPMIITPPHKHLIAQAHNGSGKTTCFVLGMLSRV--DPSLRQPQ---- 1166
K+ KP+ +Q ++P+++ + L+A A GSGKT F ++S + D +++P+
Sbjct: 178 KYVKPTPVQRHAIPILL--EGRDLMACAQTGSGKTAAFCFPIISGIMKDQHVQRPRGSRT 235
Query: 1165 ----ALCICPTRELANQNMEVLQKMGKFTGITAEVA---VPESNQGGNFARRAPVSAQVV 1007
A+ + PTRELA+Q + +K TG+ VA P + Q R ++
Sbjct: 236 VYPLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQ----LRELERGVDIL 291
Query: 1006 IGTPGTLKKWMAFKKLGLNHLKILVFDEADHMLATDGFRDDSLRIMKDIERVNPNY-QVL 830
+ TPG L + ++ + ++ L DEAD ML GF +I++ ++ Q L
Sbjct: 292 VATPGRLNDLLERARVSMQMIRFLALDEADRMLDM-GFEPQIRKIVEQMDMPPRGVRQTL 350
Query: 829 LFSATFNDNVK----DFVQRTL------KKSPNQLFVKREDLALDSVKQYKVVCPKEQDK 680
LFSATF ++ DF+ + S L V+R + LDS K+ ++ D
Sbjct: 351 LFSATFPREIQRLAADFLANYIFLAVGRVGSSTDLIVQRVEFVLDSDKRSHLM-----DL 405
Query: 679 IEVIKDQIMELGDIGQTIIFVKTKVSASKVHKALAEMGYDVTSVHGSMTQEERDKIVKEF 500
+ ++ ++ G T++FV+TK A + L G+ TS+HG TQ+ER+ +K F
Sbjct: 406 LHAQRENGIQ-GKQALTLVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAF 464
Query: 499 KDCLTQVLIATDVLARGFDQQRVNLVVNYNMPTKYETGEPDYEVYLHRVGRAGRFGRKG- 323
K T +L+ATDV ARG D V VVN+++P D + Y+HR+GR GR G+ G
Sbjct: 465 KSGRTPILVATDVAARGLDIPHVAHVVNFDLPN-------DIDDYVHRIGRTGRAGKSGL 517
Query: 322 --AVFN 311
A FN
Sbjct: 518 ATAFFN 523
>TAIR9_protein||AT2G33730.1 | Symbols: | DEAD box RNA helicase, putative |
chr2:14265679-14267880 REVERSE
Length = 734
Score = 146 bits (367), Expect = 5e-035
Identities = 117/382 (30%), Positives = 186/382 (48%), Gaps = 39/382 (10%)
Frame = -1
Query: 1381 FEDLNLSPELMKGLYVEMKFEKPSKIQAISLPMIITPPHKHLIAQAHNGSGKTTCFVLGM 1202
+E+ L+ EL+K + ++KPS IQ ++P+ + + +I A GSGKT FVL M
Sbjct: 315 WEESKLTSELLKAV-ERAGYKKPSPIQMAAIPLGL--QQRDVIGIAETGSGKTAAFVLPM 371
Query: 1201 L---SRVDPSLRQ-----PQALCICPTRELANQNMEVLQKMGKFTG--ITAEVAVPESNQ 1052
L SR+ P + P A+ + PTRELA Q E K + G +T+ V +
Sbjct: 372 LAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGGQSIEE 431
Query: 1051 GGNFARRAPVSAQVVIGTPGTLKKWMAFKKLGLNHLKILVFDEADHML----------AT 902
G + ++VI TPG L + + LN +V DEAD M+
Sbjct: 432 QG---LKITQGCEIVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVAGVL 488
Query: 901 DGFRDDSLRIMKDIERVNPN---YQVLLFSATFNDNVKDFVQRTLKKSPNQLFVKREDLA 731
D +L+ + E ++ +FSAT V+ ++ L ++P + +
Sbjct: 489 DAMPSSNLKPENEEEELDEKKIYRTTYMFSATMPPGVERLARKYL-RNPVVVTIGTAGKT 547
Query: 730 LDSVKQYKVVCPKEQDKIEVIKDQIMELGDIGQTIIFVKTKVSASKVHKALAEMGYDVTS 551
D + Q+ V+ KE +K ++ + ELG+ I+FV TK + + K L + GY VT+
Sbjct: 548 TDLISQH-VIMMKESEKFFRLQKLLDELGE-KTAIVFVNTKKNCDSIAKNLDKAGYRVTT 605
Query: 550 VHGSMTQEERDKIVKEFKDCLTQVLIATDVLARGFDQQRVNLVVNYNMPTKYETGEPDYE 371
+HG +QE+R+ ++ F+ VL+ATDV+ RG D V V+NY+MP E
Sbjct: 606 LHGGKSQEQREISLEGFRAKRYNVLVATDVVGRGIDIPDVAHVINYDMP-------KHIE 658
Query: 370 VYLHRVGRAGRFGRKGAVFNLL 305
+Y HR+GR GR G+ G + L
Sbjct: 659 MYTHRIGRTGRAGKSGVATSFL 680
>TAIR9_protein||AT3G58510.1 | Symbols: | DEAD box RNA helicase, putative (RH11)
| chr3:21640608-21643464 FORWARD
Length = 613
Score = 144 bits (363), Expect = 2e-034
Identities = 125/459 (27%), Positives = 209/459 (45%), Gaps = 45/459 (9%)
Frame = -1
Query: 1534 DDDEEEANAVSELNSLSIKEEEKHESILDEPEDSNIKAVTSGDTPYTSASRFEDLNLSPE 1355
D E E N + L E+ + ++ +I TSG + F D++L
Sbjct: 102 DRREREVNPFGDDAELEPVFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADIDLGDA 161
Query: 1354 LMKGLYVEMKFEKPSKIQAISLPMIITPPHKHLIAQAHNGSGKTTCFVLGMLSRV--DPS 1181
L + K+ +P+ +Q ++P+++ + L+A A GSGKT F ++S + D
Sbjct: 162 LNLNIR-RCKYVRPTPVQRHAIPILLA--ERDLMACAQTGSGKTAAFCFPIISGIMKDQH 218
Query: 1180 LRQPQ--------ALCICPTRELANQNMEVLQKMGKFTGITAEVA---VPESNQGGNFAR 1034
+ +P+ A+ + PTRELA Q + +K TG+ VA P Q R
Sbjct: 219 VERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQ----LR 274
Query: 1033 RAPVSAQVVIGTPGTLKKWMAFKKLGLNHLKILVFDEADHMLATDGFRDDSLRIMKDIER 854
+++ TPG L + ++ + ++ L DEAD ML GF +I++ ++
Sbjct: 275 ELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDM-GFEPQIRKIVEQMDM 333
Query: 853 VNPNY-QVLLFSATFNDNVK----DFVQRTLKKSPNQLFVKREDLALDSVKQYKVVCPKE 689
Q +LFSATF ++ DF+ + L V R + D + Q +V +E
Sbjct: 334 PPRGVRQTMLFSATFPSQIQRLAADFMSNYI-----FLAVGRVGSSTDLITQ-RVEFVQE 387
Query: 688 QDK----IEVIKDQIMELGDIGQTIIFVKTKVSASKVHKALAEMGYDVTSVHGSMTQEER 521
DK ++++ Q T++FV+TK A + L + TS+HG TQ+ER
Sbjct: 388 SDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQER 447
Query: 520 DKIVKEFKDCLTQVLIATDVLARGFDQQRVNLVVNYNMPTKYETGEPDYEVYLHRVGRAG 341
+ ++ FK T +L+ATDV ARG D V VVN+++P D + Y+HR+GR G
Sbjct: 448 EVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPN-------DIDDYVHRIGRTG 500
Query: 340 RFGRKGAVFNLLLENGDDKEVMEKIERYFGAQVKEIKSW 224
R G+ G EN + ++ + +E+ W
Sbjct: 501 RAGKSGIATAFFNEN--NAQLARSLAELMQEANQEVPEW 537
>TAIR9_protein||AT3G58510.2 | Symbols: | DEAD box RNA helicase, putative (RH11)
| chr3:21640608-21643464 FORWARD
Length = 613
Score = 144 bits (363), Expect = 2e-034
Identities = 125/459 (27%), Positives = 209/459 (45%), Gaps = 45/459 (9%)
Frame = -1
Query: 1534 DDDEEEANAVSELNSLSIKEEEKHESILDEPEDSNIKAVTSGDTPYTSASRFEDLNLSPE 1355
D E E N + L E+ + ++ +I TSG + F D++L
Sbjct: 102 DRREREVNPFGDDAELEPVFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADIDLGDA 161
Query: 1354 LMKGLYVEMKFEKPSKIQAISLPMIITPPHKHLIAQAHNGSGKTTCFVLGMLSRV--DPS 1181
L + K+ +P+ +Q ++P+++ + L+A A GSGKT F ++S + D
Sbjct: 162 LNLNIR-RCKYVRPTPVQRHAIPILLA--ERDLMACAQTGSGKTAAFCFPIISGIMKDQH 218
Query: 1180 LRQPQ--------ALCICPTRELANQNMEVLQKMGKFTGITAEVA---VPESNQGGNFAR 1034
+ +P+ A+ + PTRELA Q + +K TG+ VA P Q R
Sbjct: 219 VERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQ----LR 274
Query: 1033 RAPVSAQVVIGTPGTLKKWMAFKKLGLNHLKILVFDEADHMLATDGFRDDSLRIMKDIER 854
+++ TPG L + ++ + ++ L DEAD ML GF +I++ ++
Sbjct: 275 ELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDM-GFEPQIRKIVEQMDM 333
Query: 853 VNPNY-QVLLFSATFNDNVK----DFVQRTLKKSPNQLFVKREDLALDSVKQYKVVCPKE 689
Q +LFSATF ++ DF+ + L V R + D + Q +V +E
Sbjct: 334 PPRGVRQTMLFSATFPSQIQRLAADFMSNYI-----FLAVGRVGSSTDLITQ-RVEFVQE 387
Query: 688 QDK----IEVIKDQIMELGDIGQTIIFVKTKVSASKVHKALAEMGYDVTSVHGSMTQEER 521
DK ++++ Q T++FV+TK A + L + TS+HG TQ+ER
Sbjct: 388 SDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQER 447
Query: 520 DKIVKEFKDCLTQVLIATDVLARGFDQQRVNLVVNYNMPTKYETGEPDYEVYLHRVGRAG 341
+ ++ FK T +L+ATDV ARG D V VVN+++P D + Y+HR+GR G
Sbjct: 448 EVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPN-------DIDDYVHRIGRTG 500
Query: 340 RFGRKGAVFNLLLENGDDKEVMEKIERYFGAQVKEIKSW 224
R G+ G EN + ++ + +E+ W
Sbjct: 501 RAGKSGIATAFFNEN--NAQLARSLAELMQEANQEVPEW 537
>TAIR9_protein||AT3G58510.3 | Symbols: | DEAD box RNA helicase, putative (RH11)
| chr3:21640608-21643464 FORWARD
Length = 613
Score = 144 bits (363), Expect = 2e-034
Identities = 125/459 (27%), Positives = 209/459 (45%), Gaps = 45/459 (9%)
Frame = -1
Query: 1534 DDDEEEANAVSELNSLSIKEEEKHESILDEPEDSNIKAVTSGDTPYTSASRFEDLNLSPE 1355
D E E N + L E+ + ++ +I TSG + F D++L
Sbjct: 102 DRREREVNPFGDDAELEPVFTEQENTGINFDAYEDIPVETSGGDVPPPVNTFADIDLGDA 161
Query: 1354 LMKGLYVEMKFEKPSKIQAISLPMIITPPHKHLIAQAHNGSGKTTCFVLGMLSRV--DPS 1181
L + K+ +P+ +Q ++P+++ + L+A A GSGKT F ++S + D
Sbjct: 162 LNLNIR-RCKYVRPTPVQRHAIPILLA--ERDLMACAQTGSGKTAAFCFPIISGIMKDQH 218
Query: 1180 LRQPQ--------ALCICPTRELANQNMEVLQKMGKFTGITAEVA---VPESNQGGNFAR 1034
+ +P+ A+ + PTRELA Q + +K TG+ VA P Q R
Sbjct: 219 VERPRGSRAVYPFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTPIHQQ----LR 274
Query: 1033 RAPVSAQVVIGTPGTLKKWMAFKKLGLNHLKILVFDEADHMLATDGFRDDSLRIMKDIER 854
+++ TPG L + ++ + ++ L DEAD ML GF +I++ ++
Sbjct: 275 ELERGCDILVATPGRLNDLLERARVSMQMIRFLALDEADRMLDM-GFEPQIRKIVEQMDM 333
Query: 853 VNPNY-QVLLFSATFNDNVK----DFVQRTLKKSPNQLFVKREDLALDSVKQYKVVCPKE 689
Q +LFSATF ++ DF+ + L V R + D + Q +V +E
Sbjct: 334 PPRGVRQTMLFSATFPSQIQRLAADFMSNYI-----FLAVGRVGSSTDLITQ-RVEFVQE 387
Query: 688 QDK----IEVIKDQIMELGDIGQTIIFVKTKVSASKVHKALAEMGYDVTSVHGSMTQEER 521
DK ++++ Q T++FV+TK A + L + TS+HG TQ+ER
Sbjct: 388 SDKRSHLMDLLHAQRETQDKQSLTLVFVETKRGADTLENWLCMNEFPATSIHGDRTQQER 447
Query: 520 DKIVKEFKDCLTQVLIATDVLARGFDQQRVNLVVNYNMPTKYETGEPDYEVYLHRVGRAG 341
+ ++ FK T +L+ATDV ARG D V VVN+++P D + Y+HR+GR G
Sbjct: 448 EVALRSFKTGRTPILVATDVAARGLDIPHVAHVVNFDLPN-------DIDDYVHRIGRTG 500
Query: 340 RFGRKGAVFNLLLENGDDKEVMEKIERYFGAQVKEIKSW 224
R G+ G EN + ++ + +E+ W
Sbjct: 501 RAGKSGIATAFFNEN--NAQLARSLAELMQEANQEVPEW 537
>TAIR9_protein||AT1G55150.1 | Symbols: | DEAD box RNA helicase, putative (RH20)
| chr1:20574634-20577141 FORWARD
Length = 502
Score = 144 bits (361), Expect = 3e-034
Identities = 107/345 (31%), Positives = 164/345 (47%), Gaps = 26/345 (7%)
Frame = -1
Query: 1324 FEKPSKIQAISLPMIITPPHKHLIAQAHNGSGKTTCFVLGMLSRVD--PSLRQ---PQAL 1160
F +P+ IQ+ PM + + LI A GSGKT ++L + V+ P L P L
Sbjct: 119 FTEPTPIQSQGWPMAM--KGRDLIGIAETGSGKTLSYLLPAIVHVNAQPMLAHGDGPIVL 176
Query: 1159 CICPTRELANQNMEVLQKMGKFTGITAEV---AVPESNQGGNFARRAPVSAQVVIGTPGT 989
+ PTRELA Q + K G + I VP+ Q R ++VI TPG
Sbjct: 177 VLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPKGPQ----VRDLQKGVEIVIATPGR 232
Query: 988 LKKWMAFKKLGLNHLKILVFDEADHMLATDGFRDDSLRIMKDIERVNPNYQVLLFSATFN 809
L M L + LV DEAD ML GF +I K + + P+ Q L +SAT+
Sbjct: 233 LIDMMESNNTNLRRVTYLVLDEADRMLDM-GF---DPQIRKIVSHIRPDRQTLYWSATWP 288
Query: 808 DNVKDFVQRTLKKSPNQLFVKREDLALDSVKQYKVVCPKEQDKIEVIKDQIMELGDIGQT 629
V+ ++ L +P ++ + DL + + V E K + + ++ D +
Sbjct: 289 KEVEQLSKKFL-YNPYKVIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDIMDGSRI 347
Query: 628 IIFVKTKVSASKVHKALAEMGYDVTSVHGSMTQEERDKIVKEFKDCLTQVLIATDVLARG 449
++F+ TK ++ + L G+ S+HG +Q ERD ++ EF+ + ++ ATDV ARG
Sbjct: 348 LVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAARG 407
Query: 448 FDQQRVNLVVNYNMPTKYETGEPDYEVYLHRVGRAGRFGRKGAVF 314
D + V V+NY+ P E Y+HR+GR GR G KG +
Sbjct: 408 LDVKDVKYVINYDFPGSLED-------YVHRIGRTGRAGAKGTAY 445
>TAIR9_protein||AT5G11200.1 | Symbols: | DEAD/DEAH box helicase, putative |
chr5:3567389-3570686 FORWARD
Length = 428
Score = 143 bits (360), Expect = 4e-034
Identities = 88/262 (33%), Positives = 148/262 (56%), Gaps = 17/262 (6%)
Frame = -1
Query: 1012 VVIGTPGTLKKWMAFKKLGLNHLKILVFDEADHMLATDGFRDDSLRIMKDIERVNP-NYQ 836
+V+GTPG + K L L +++ + DE D ML + R D +++I ++ P + Q
Sbjct: 169 IVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRD----VQEIFKMTPHDKQ 224
Query: 835 VLLFSATFNDNVKDFVQRTLKKSPNQLFVKRE-DLALDSVKQYKVVCPKEQDKIEVIKDQ 659
V++FSAT + ++ V + + P +++V E L L + Q+ + E +K + D
Sbjct: 225 VMMFSATLSKEIRP-VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SEMEKNRKLND- 281
Query: 658 IMELGDIGQTIIFVKTKVSASKVHKALAEMGYDVTSVHGSMTQEERDKIVKEFKDCLTQV 479
+++ D Q +IFVK+ A++++K L E + +H M+QEER K FK+ ++
Sbjct: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRI 341
Query: 478 LIATDVLARGFDQQRVNLVVNYNMPTKYETGEPDYEVYLHRVGRAGRFGRKGAVFNLLLE 299
L+ATD++ RG D +RVN+V+NY+MP +T YLHRVGRAGRFG KG +
Sbjct: 342 LVATDLVGRGIDIERVNIVINYDMPDSADT-------YLHRVGRAGRFGTKGLAIT-FVA 393
Query: 298 NGDDKEVMEKIERYFGAQVKEI 233
+ D EV+ +++ F +KE+
Sbjct: 394 SASDSEVLNQVQERFEVDIKEL 415
>TAIR9_protein||AT5G11170.2 | Symbols: | ATP binding / ATP-dependent helicase/
helicase/ nucleic acid binding | chr5:3554272-3556646 FORWARD
Length = 345
Score = 143 bits (360), Expect = 4e-034
Identities = 88/262 (33%), Positives = 148/262 (56%), Gaps = 17/262 (6%)
Frame = -1
Query: 1012 VVIGTPGTLKKWMAFKKLGLNHLKILVFDEADHMLATDGFRDDSLRIMKDIERVNP-NYQ 836
+V+GTPG + K L L +++ + DE D ML + R D +++I ++ P + Q
Sbjct: 86 IVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRD----VQEIFKMTPHDKQ 141
Query: 835 VLLFSATFNDNVKDFVQRTLKKSPNQLFVKRE-DLALDSVKQYKVVCPKEQDKIEVIKDQ 659
V++FSAT + ++ V + + P +++V E L L + Q+ + E +K + D
Sbjct: 142 VMMFSATLSKEIRP-VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SEMEKNRKLND- 198
Query: 658 IMELGDIGQTIIFVKTKVSASKVHKALAEMGYDVTSVHGSMTQEERDKIVKEFKDCLTQV 479
+++ D Q +IFVK+ A++++K L E + +H M+QEER K FK+ ++
Sbjct: 199 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRI 258
Query: 478 LIATDVLARGFDQQRVNLVVNYNMPTKYETGEPDYEVYLHRVGRAGRFGRKGAVFNLLLE 299
L+ATD++ RG D +RVN+V+NY+MP +T YLHRVGRAGRFG KG +
Sbjct: 259 LVATDLVGRGIDIERVNIVINYDMPDSADT-------YLHRVGRAGRFGTKGLAIT-FVA 310
Query: 298 NGDDKEVMEKIERYFGAQVKEI 233
+ D EV+ +++ F +KE+
Sbjct: 311 SASDSEVLNQVQERFEVDIKEL 332
>TAIR9_protein||AT5G11170.1 | Symbols: | ATP binding / ATP-dependent helicase/
helicase/ nucleic acid binding | chr5:3553334-3556646 FORWARD
Length = 428
Score = 143 bits (360), Expect = 4e-034
Identities = 88/262 (33%), Positives = 148/262 (56%), Gaps = 17/262 (6%)
Frame = -1
Query: 1012 VVIGTPGTLKKWMAFKKLGLNHLKILVFDEADHMLATDGFRDDSLRIMKDIERVNP-NYQ 836
+V+GTPG + K L L +++ + DE D ML + R D +++I ++ P + Q
Sbjct: 169 IVVGTPGRVLALAREKDLSLKNVRHFILDECDKMLESLDMRRD----VQEIFKMTPHDKQ 224
Query: 835 VLLFSATFNDNVKDFVQRTLKKSPNQLFVKRE-DLALDSVKQYKVVCPKEQDKIEVIKDQ 659
V++FSAT + ++ V + + P +++V E L L + Q+ + E +K + D
Sbjct: 225 VMMFSATLSKEIRP-VCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKL-SEMEKNRKLND- 281
Query: 658 IMELGDIGQTIIFVKTKVSASKVHKALAEMGYDVTSVHGSMTQEERDKIVKEFKDCLTQV 479
+++ D Q +IFVK+ A++++K L E + +H M+QEER K FK+ ++
Sbjct: 282 LLDALDFNQVVIFVKSVSRAAELNKLLVECNFPSICIHSGMSQEERLTRYKSFKEGHKRI 341
Query: 478 LIATDVLARGFDQQRVNLVVNYNMPTKYETGEPDYEVYLHRVGRAGRFGRKGAVFNLLLE 299
L+ATD++ RG D +RVN+V+NY+MP +T YLHRVGRAGRFG KG +
Sbjct: 342 LVATDLVGRGIDIERVNIVINYDMPDSADT-------YLHRVGRAGRFGTKGLAIT-FVA 393
Query: 298 NGDDKEVMEKIERYFGAQVKEI 233
+ D EV+ +++ F +KE+
Sbjct: 394 SASDSEVLNQVQERFEVDIKEL 415
>TAIR9_protein||AT3G58570.1 | Symbols: | DEAD box RNA helicase, putative |
chr3:21657099-21660352 FORWARD
Length = 647
Score = 142 bits (357), Expect = 8e-034
Identities = 114/364 (31%), Positives = 180/364 (49%), Gaps = 43/364 (11%)
Frame = -1
Query: 1327 KFEKPSKIQAISLPMIITPPHKHLIAQAHNGSGKTTCFVLGMLSRV--DPSLRQPQ---- 1166
K+ KP+ +Q ++P++ + L+A A GSGKT F ++S + D + +P+
Sbjct: 165 KYVKPTPVQRNAIPILAA--GRDLMACAQTGSGKTAAFCFPIISGIMKDQHIERPRGVRG 222
Query: 1165 ----ALCICPTRELANQNMEVLQKMGKFTGITAEVA---VPESNQGGNFARRAPVSAQVV 1007
A+ + PTRELA Q + +K TG+ VA P + Q R ++
Sbjct: 223 VYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQ----IRELERGVDIL 278
Query: 1006 IGTPGTLKKWMAFKKLGLNHLKILVFDEADHMLATDGFRDDSLRIMKDIERVNPNY-QVL 830
+ TPG L + ++ L ++ L DEAD ML GF +I++ ++ P Q +
Sbjct: 279 VATPGRLNDLLERGRVSLQMVRFLALDEADRMLDM-GFEPQIRKIVQQMDMPPPGVRQTM 337
Query: 829 LFSATFNDNVKDFVQRTLKKSPNQLF--VKREDLALDSVKQYKVVCPKEQDKIEVIKDQI 656
LFSATF ++ L N +F V R + D + Q +V + DK + D +
Sbjct: 338 LFSATFPREIQRLASDFLS---NYIFLAVGRVGSSTDLIVQ-RVEFVHDSDKRSHLMDLL 393
Query: 655 ---MELGDIGQ---TIIFVKTKVSASKVHKALAEMGYDVTSVHGSMTQEERDKIVKEFKD 494
E G+ G+ T++FV+TK A + L G+ T++HG +Q+ER+ ++ FK
Sbjct: 394 HAQRENGNQGKQALTLVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKT 453
Query: 493 CLTQVLIATDVLARGFDQQRVNLVVNYNMPTKYETGEPDYEVYLHRVGRAGRFGRKG--- 323
T +L+ATDV ARG D V VVN+++P D + Y+HR+GR GR G G
Sbjct: 454 GRTPILVATDVAARGLDIPHVAHVVNFDLPN-------DIDDYVHRIGRTGRAGNSGLAT 506
Query: 322 AVFN 311
A FN
Sbjct: 507 AFFN 510
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,739,053,950
Number of Sequences: 33410
Number of Extensions: 7739053950
Number of Successful Extensions: 259342262
Number of sequences better than 0.0: 0
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