BLASTX 7.6.2
Query= UN14849 /QuerySize=1089
(1088 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P0AGK6|YHBY_ECO57 RNA-binding protein yhbY OS=Escherichia col... 53 4e-006
sp|P0AGK5|YHBY_ECOL6 RNA-binding protein yhbY OS=Escherichia col... 53 4e-006
sp|P0AGK4|YHBY_ECOLI RNA-binding protein yhbY OS=Escherichia col... 53 4e-006
sp|P0AGK7|YHBY_SHIFL RNA-binding protein yhbY OS=Shigella flexne... 53 4e-006
>sp|P0AGK6|YHBY_ECO57 RNA-binding protein yhbY OS=Escherichia coli O157:H7
GN=yhbY PE=4 SV=1
Length = 97
Score = 53 bits (125), Expect = 4e-006
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = +3
Query: 477 KEKKELASYAHSLGDKLKCQLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPEEMEDA 656
K+K+ L AH L + L+G +G+T+ V+ + LE +EL+KVKI E
Sbjct: 6 KQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62
Query: 657 VRHLEEATGSVAVGQIGRTVILYRPS 734
V + TG+ V IG+T++LYRP+
Sbjct: 63 VEAIVRETGACNVQVIGKTLVLYRPT 88
>sp|P0AGK5|YHBY_ECOL6 RNA-binding protein yhbY OS=Escherichia coli O6 GN=yhbY
PE=4 SV=1
Length = 97
Score = 53 bits (125), Expect = 4e-006
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = +3
Query: 477 KEKKELASYAHSLGDKLKCQLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPEEMEDA 656
K+K+ L AH L + L+G +G+T+ V+ + LE +EL+KVKI E
Sbjct: 6 KQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62
Query: 657 VRHLEEATGSVAVGQIGRTVILYRPS 734
V + TG+ V IG+T++LYRP+
Sbjct: 63 VEAIVRETGACNVQVIGKTLVLYRPT 88
>sp|P0AGK4|YHBY_ECOLI RNA-binding protein yhbY OS=Escherichia coli (strain K12)
GN=yhbY PE=1 SV=1
Length = 97
Score = 53 bits (125), Expect = 4e-006
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = +3
Query: 477 KEKKELASYAHSLGDKLKCQLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPEEMEDA 656
K+K+ L AH L + L+G +G+T+ V+ + LE +EL+KVKI E
Sbjct: 6 KQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62
Query: 657 VRHLEEATGSVAVGQIGRTVILYRPS 734
V + TG+ V IG+T++LYRP+
Sbjct: 63 VEAIVRETGACNVQVIGKTLVLYRPT 88
>sp|P0AGK7|YHBY_SHIFL RNA-binding protein yhbY OS=Shigella flexneri GN=yhbY PE=4
SV=1
Length = 97
Score = 53 bits (125), Expect = 4e-006
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Frame = +3
Query: 477 KEKKELASYAHSLGDKLKCQLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPEEMEDA 656
K+K+ L AH L + L+G +G+T+ V+ + LE +EL+KVKI E
Sbjct: 6 KQKQHLKGLAHPLKPVV---LLGSNGLTEGVLAEIEQALEHHELIKVKIATEDRETKTLI 62
Query: 657 VRHLEEATGSVAVGQIGRTVILYRPS 734
V + TG+ V IG+T++LYRP+
Sbjct: 63 VEAIVRETGACNVQVIGKTLVLYRPT 88
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,727,594,170
Number of Sequences: 518415
Number of Extensions: 61727594170
Number of Successful Extensions: 397900902
Number of sequences better than 0.0: 0
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