BLASTX 7.6.2
Query= UN14877 /QuerySize=808
(807 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P38421|RPB7_ARATH DNA-directed RNA polymerase II subunit RPB7... 347 6e-095
sp|P46279|RPB7_SOYBN DNA-directed RNA polymerase II subunit RPB7... 337 9e-092
sp|Q5E9B8|RPB7_BOVIN DNA-directed RNA polymerase II subunit RPB7... 200 1e-050
sp|Q7ZW41|RPB7_DANRE DNA-directed RNA polymerase II subunit RPB7... 200 1e-050
sp|P62487|RPB7_HUMAN DNA-directed RNA polymerase II subunit RPB7... 200 1e-050
sp|P62488|RPB7_MOUSE DNA-directed RNA polymerase II subunit RPB7... 200 1e-050
sp|P62489|RPB7_RAT DNA-directed RNA polymerase II subunit RPB7 O... 200 1e-050
sp|Q54P04|RPB7_DICDI DNA-directed RNA polymerase II subunit rpb7... 192 3e-048
sp|O14459|RPB7_SCHPO DNA-directed RNA polymerase II subunit rpb7... 171 6e-042
sp|P34087|RPB7_YEAST DNA-directed RNA polymerase II subunit RPB7... 136 3e-031
>sp|P38421|RPB7_ARATH DNA-directed RNA polymerase II subunit RPB7 OS=Arabidopsis
thaliana GN=RPB19 PE=1 SV=1
Length = 176
Score = 347 bits (889), Expect = 6e-095
Identities = 169/176 (96%), Positives = 174/176 (98%)
Frame = +3
Query: 72 MFFHIVLERNVQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 251
MFFHIVLERN+QLHPRFFGRNL+ENLVSKLMKDVEGTCSGRHGFVVAITGI+++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRFFGRNLKENLVSKLMKDVEGTCSGRHGFVVAITGIDTIGKGLIR 60
Query: 252 DGTAFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQ 431
DGT FVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQ 120
Query: 432 AGDMPNYTTSDGSVKIQKECEVRLKIIGTRVDATEIFCVGTIKDDFLGVINDPAAA 599
AGDMPNYTTSDGSVKIQKECEVRLKIIGTRVDAT IFCVGTIKDDFLGVINDPAAA
Sbjct: 121 AGDMPNYTTSDGSVKIQKECEVRLKIIGTRVDATAIFCVGTIKDDFLGVINDPAAA 176
>sp|P46279|RPB7_SOYBN DNA-directed RNA polymerase II subunit RPB7 OS=Glycine max
PE=2 SV=1
Length = 176
Score = 337 bits (862), Expect = 9e-092
Identities = 161/174 (92%), Positives = 171/174 (98%)
Frame = +3
Query: 72 MFFHIVLERNVQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 251
MFFHIVLERN+QLHPR+FGRNLR+NLVSKLMKDVEGTCSGRHGFVVA+TGIE++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 60
Query: 252 DGTAFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQ 431
DGT FVTFPVKYQCVVFRPFKGEILEAVVT+VNKMGFFAEAGPVQIFVS HLIPDDMEFQ
Sbjct: 61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ 120
Query: 432 AGDMPNYTTSDGSVKIQKECEVRLKIIGTRVDATEIFCVGTIKDDFLGVINDPA 593
+GDMPNYTTSDGSVKIQK+ EVRLKIIGTRVDATEIFC+GTIKDDFLGVINDPA
Sbjct: 121 SGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPA 174
>sp|Q5E9B8|RPB7_BOVIN DNA-directed RNA polymerase II subunit RPB7 OS=Bos taurus
GN=POLR2G PE=2 SV=1
Length = 172
Score = 200 bits (508), Expect = 1e-050
Identities = 89/172 (51%), Positives = 129/172 (75%), Gaps = 1/172 (0%)
Frame = +3
Query: 72 MFFHIVLERNVQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 251
MF+HI LE + LHPR+FG NL + KL +VEGTC+G++GFV+A+T I+++G G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60
Query: 252 DGTAFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQ 431
G FV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S+H IP +MEF
Sbjct: 61 PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120
Query: 432 A-GDMPNYTTSDGSVKIQKECEVRLKIIGTRVDATEIFCVGTIKDDFLGVIN 584
+ P Y T D + IQ++ E+RLKI+GTRVD +IF +G++ DD+LG+++
Sbjct: 121 PNSNPPCYKTMDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS 172
>sp|Q7ZW41|RPB7_DANRE DNA-directed RNA polymerase II subunit RPB7 OS=Danio rerio
GN=polr2g PE=2 SV=1
Length = 172
Score = 200 bits (508), Expect = 1e-050
Identities = 90/172 (52%), Positives = 129/172 (75%), Gaps = 1/172 (0%)
Frame = +3
Query: 72 MFFHIVLERNVQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 251
MF+HI LE + LHPR+FG NL + KL +VEGTC+G++GFV+A+T I+++G G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60
Query: 252 DGTAFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQ 431
G FV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S+H IP +MEF
Sbjct: 61 PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120
Query: 432 A-GDMPNYTTSDGSVKIQKECEVRLKIIGTRVDATEIFCVGTIKDDFLGVIN 584
+ P Y T D V IQ++ E+RLKI+GTRVD +IF +G++ DD+LG+++
Sbjct: 121 PNSNPPCYKTVDEDVVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS 172
>sp|P62487|RPB7_HUMAN DNA-directed RNA polymerase II subunit RPB7 OS=Homo
sapiens GN=POLR2G PE=1 SV=1
Length = 172
Score = 200 bits (508), Expect = 1e-050
Identities = 89/172 (51%), Positives = 129/172 (75%), Gaps = 1/172 (0%)
Frame = +3
Query: 72 MFFHIVLERNVQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 251
MF+HI LE + LHPR+FG NL + KL +VEGTC+G++GFV+A+T I+++G G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60
Query: 252 DGTAFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQ 431
G FV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S+H IP +MEF
Sbjct: 61 PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120
Query: 432 A-GDMPNYTTSDGSVKIQKECEVRLKIIGTRVDATEIFCVGTIKDDFLGVIN 584
+ P Y T D + IQ++ E+RLKI+GTRVD +IF +G++ DD+LG+++
Sbjct: 121 PNSNPPCYKTMDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS 172
>sp|P62488|RPB7_MOUSE DNA-directed RNA polymerase II subunit RPB7 OS=Mus
musculus GN=Polr2g PE=2 SV=1
Length = 172
Score = 200 bits (508), Expect = 1e-050
Identities = 89/172 (51%), Positives = 129/172 (75%), Gaps = 1/172 (0%)
Frame = +3
Query: 72 MFFHIVLERNVQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 251
MF+HI LE + LHPR+FG NL + KL +VEGTC+G++GFV+A+T I+++G G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60
Query: 252 DGTAFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQ 431
G FV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S+H IP +MEF
Sbjct: 61 PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120
Query: 432 A-GDMPNYTTSDGSVKIQKECEVRLKIIGTRVDATEIFCVGTIKDDFLGVIN 584
+ P Y T D + IQ++ E+RLKI+GTRVD +IF +G++ DD+LG+++
Sbjct: 121 PNSNPPCYKTMDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS 172
>sp|P62489|RPB7_RAT DNA-directed RNA polymerase II subunit RPB7 OS=Rattus
norvegicus GN=Polr2g PE=2 SV=1
Length = 172
Score = 200 bits (508), Expect = 1e-050
Identities = 89/172 (51%), Positives = 129/172 (75%), Gaps = 1/172 (0%)
Frame = +3
Query: 72 MFFHIVLERNVQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 251
MF+HI LE + LHPR+FG NL + KL +VEGTC+G++GFV+A+T I+++G G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60
Query: 252 DGTAFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQ 431
G FV +PVKY+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S+H IP +MEF
Sbjct: 61 PGRGFVLYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFD 120
Query: 432 A-GDMPNYTTSDGSVKIQKECEVRLKIIGTRVDATEIFCVGTIKDDFLGVIN 584
+ P Y T D + IQ++ E+RLKI+GTRVD +IF +G++ DD+LG+++
Sbjct: 121 PNSNPPCYKTMDEDIVIQQDDEIRLKIVGTRVDKNDIFAIGSLMDDYLGLVS 172
>sp|Q54P04|RPB7_DICDI DNA-directed RNA polymerase II subunit rpb7
OS=Dictyostelium discoideum GN=polr2g PE=3 SV=1
Length = 172
Score = 192 bits (487), Expect = 3e-048
Identities = 89/171 (52%), Positives = 127/171 (74%), Gaps = 1/171 (0%)
Frame = +3
Query: 72 MFFHIVLERNVQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 251
MFFH+ LE+++ +HP+ G NL +L +VEGTC+GR+GF++ IT ++ + KG +
Sbjct: 1 MFFHLTLEKDLHMHPKHCGPNLFTIATQQLYSEVEGTCTGRYGFIITITSVDFLSKGKVL 60
Query: 252 DGTAFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQ 431
+ + +V F VKY+ ++F+PFKGE+L+A+VT V +GFFAEAGP+ IFVS LIP DM F
Sbjct: 61 ESSGYVVFNVKYKAIIFKPFKGEVLDAIVTKVTNLGFFAEAGPLSIFVSTQLIPSDMIFD 120
Query: 432 A-GDMPNYTTSDGSVKIQKECEVRLKIIGTRVDATEIFCVGTIKDDFLGVI 581
A +P + + DGS KI K+ EVRL+I GTRVDATEIF +G+I++D+LGVI
Sbjct: 121 AQSAVPCFVSEDGSSKISKDDEVRLQIKGTRVDATEIFAIGSIREDYLGVI 171
>sp|O14459|RPB7_SCHPO DNA-directed RNA polymerase II subunit rpb7
OS=Schizosaccharomyces pombe GN=rpb7 PE=1 SV=1
Length = 172
Score = 171 bits (432), Expect = 6e-042
Identities = 82/172 (47%), Positives = 119/172 (69%), Gaps = 5/172 (2%)
Frame = +3
Query: 75 FFHIVLERNVQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAI--TGIESVGKGLI 248
FF L + LHP +FG +++ L +KL+ DVEGTCSG++G+++ + + + KG +
Sbjct: 3 FFLKELSLTISLHPSYFGPRMQDYLKAKLLADVEGTCSGQYGYIICVLDSNTIDIDKGRV 62
Query: 249 RDGTAFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEF 428
G F F VKY+ V++RPF+GE+++A+VT VNKMGFFA GP+ +FVS HL+P DM+F
Sbjct: 63 VPGQGFAEFEVKYRAVLWRPFRGEVVDAIVTTVNKMGFFANIGPLNVFVSSHLVPPDMKF 122
Query: 429 Q-AGDMPNYTTSDGSVKIQKECEVRLKIIGTRVDATEIFCVGTIKDDFLGVI 581
+ PNY+ D I+K VRLKI+GTR DATEIF + T+K+D+LGV+
Sbjct: 123 DPTANPPNYSGED--QVIEKGSNVRLKIVGTRTDATEIFAIATMKEDYLGVL 172
>sp|P34087|RPB7_YEAST DNA-directed RNA polymerase II subunit RPB7
OS=Saccharomyces cerevisiae GN=RPB7 PE=1 SV=1
Length = 171
Score = 136 bits (340), Expect = 3e-031
Identities = 68/175 (38%), Positives = 115/175 (65%), Gaps = 9/175 (5%)
Frame = +3
Query: 72 MFFHIVLERNVQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESV----GK 239
MFF L N+ LHP FFG +++ L +KL+++VEG+C+G+ G+++ + +++ G+
Sbjct: 1 MFFIKDLSLNITLHPSFFGPRMKQYLKTKLLEEVEGSCTGKFGYILCVLDYDNIDIQRGR 60
Query: 240 GLIRDGTAFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDD 419
L DG+A F VKY+ VVF+PFKGE+++ V ++ GF + GP+++FV+KHL+P D
Sbjct: 61 ILPTDGSA--EFNVKYRAVVFKPFKGEVVDGTVVSCSQHGFEVQVGPMKVFVTKHLMPQD 118
Query: 420 MEFQAG-DMPNYTTSDGSVKIQKECEVRLKIIGTRVDATEIFCVGTIKDDFLGVI 581
+ F AG + P+Y +S+ + I+ +R+KI G + I +G+IK+D+LG I
Sbjct: 119 LTFNAGSNPPSYQSSEDVITIKS--RIRVKIEGCISQVSSIHAIGSIKEDYLGAI 171
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,727,594,170
Number of Sequences: 518415
Number of Extensions: 61727594170
Number of Successful Extensions: 397900902
Number of sequences better than 0.0: 0
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