BLASTX 7.6.2

Query= UN14877 /QuerySize=808
        (807 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G59180.1 | Symbols: NRPB7 | NRPB7; DNA-directe...    347   6e-096
TAIR9_protein||AT4G14660.1 | Symbols: NRPE7 | NRPE7; DNA-directe...     73   2e-013
TAIR9_protein||AT3G22900.1 | Symbols: NRPD7 | NRPD7; DNA-directe...     69   3e-012
TAIR9_protein||AT4G14520.1 | Symbols:  | DNA-directed RNA polyme...     50   1e-006
TAIR9_protein||AT4G14520.2 | Symbols:  | DNA-directed RNA polyme...     50   1e-006

>TAIR9_protein||AT5G59180.1 | Symbols: NRPB7 | NRPB7; DNA-directed RNA
        polymerase/ RNA binding | chr5:23883499-23884976 FORWARD

          Length = 177

 Score =  347 bits (889), Expect = 6e-096
 Identities = 169/176 (96%), Positives = 174/176 (98%)
 Frame = +3

Query:  72 MFFHIVLERNVQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 251
           MFFHIVLERN+QLHPRFFGRNL+ENLVSKLMKDVEGTCSGRHGFVVAITGI+++GKGLIR
Sbjct:   1 MFFHIVLERNMQLHPRFFGRNLKENLVSKLMKDVEGTCSGRHGFVVAITGIDTIGKGLIR 60

Query: 252 DGTAFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQ 431
           DGT FVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQ
Sbjct:  61 DGTGFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQ 120

Query: 432 AGDMPNYTTSDGSVKIQKECEVRLKIIGTRVDATEIFCVGTIKDDFLGVINDPAAA 599
           AGDMPNYTTSDGSVKIQKECEVRLKIIGTRVDAT IFCVGTIKDDFLGVINDPAAA
Sbjct: 121 AGDMPNYTTSDGSVKIQKECEVRLKIIGTRVDATAIFCVGTIKDDFLGVINDPAAA 176

>TAIR9_protein||AT4G14660.1 | Symbols: NRPE7 | NRPE7; DNA-directed RNA
        polymerase | chr4:8406500-8407036 REVERSE

          Length = 179

 Score =  73 bits (177), Expect = 2e-013
 Identities = 44/133 (33%), Positives = 77/133 (57%), Gaps = 5/133 (3%)
 Frame = +3

Query: 198 GFVVAITGIESVGKGLIRDGTAFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAG 377
           G+ VA+T ++ +G+G IR+ T  V FPV +  + F+ FKGEI+  VV  V K G F   G
Sbjct:  47 GYYVAVTTLDKIGEGKIREHTGEVLFPVMFSGMTFKIFKGEIIHGVVHKVLKHGVFMRCG 106

Query: 378 PVQ-IFVSKHLIPDDMEFQAGDMPNYTTSDGSVKIQKECEVRLKIIGTR--VDATEIFCV 548
           P++ +++S   +P D ++  G+ P +     S +IQ E  VR+ +IG +      E   +
Sbjct: 107 PIENVYLSYTKMP-DYKYIPGENPIFMNEKTS-RIQVETTVRVVVIGIKWMEVEREFQAL 164

Query: 549 GTIKDDFLGVIND 587
            +++ D+LG +++
Sbjct: 165 ASLEGDYLGPLSE 177

>TAIR9_protein||AT3G22900.1 | Symbols: NRPD7 | NRPD7; DNA-directed RNA
        polymerase | chr3:8115645-8116169 FORWARD

          Length = 175

 Score =  69 bits (167), Expect = 3e-012
 Identities = 41/128 (32%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
 Frame = +3

Query: 198 GFVVAITGIESVGKGLIRDGTAFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAG 377
           G+++  T +E++G+G I++ T  + FPV +  + F+ FKGEI+  VV  V+K G F ++G
Sbjct:  46 GYLITPTILENIGEGKIKEQTGEIQFPVVFNGICFKMFKGEIVHGVVHKVHKTGVFLKSG 105

Query: 378 PVQIFVSKHLIPDDMEFQAGDMPNYTTSDGSVKIQKECEVRLKIIGT--RVDATEIFCVG 551
           P +I    H+     EF  G+ P +     S +IQ    VR  ++ T  R    +   + 
Sbjct: 106 PYEIIYLSHMKMPGYEFIPGENPFFMNQYMS-RIQIGARVRFVVLDTEWREAEKDFMALA 164

Query: 552 TIKDDFLG 575
           +I  D LG
Sbjct: 165 SIDGDNLG 172

>TAIR9_protein||AT4G14520.1 | Symbols:  | DNA-directed RNA polymerase II-related
        | chr4:8342471-8343073 FORWARD

          Length = 201

 Score =  50 bits (118), Expect = 1e-006
 Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
 Frame = +3

Query:  72 MFFHIVLERNVQLHPRFF-GRNLRENLVSKLMKDV--EGTCSGRHGFVVAITGIESVGKG 242
           MF  + + R+V +  +   G++  + ++ +L++D+  E  C   HGF + IT ++S+G  
Sbjct:   1 MFSEVEMARDVAICAKHLNGQSPHQPILCRLLQDLIHEKACR-EHGFYLGITALKSIGNN 59

Query: 243 LIRD-------GTAFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQ 386
              +           +TFPV + C  F P +G+IL+  V  V   G F  +GP++
Sbjct:  60 KNNNIDNENNHQAKILTFPVSFTCRTFLPARGDILQGTVKKVLWNGAFIRSGPLR 114

>TAIR9_protein||AT4G14520.2 | Symbols:  | DNA-directed RNA polymerase II-related
        | chr4:8342471-8343073 FORWARD

          Length = 201

 Score =  50 bits (118), Expect = 1e-006
 Identities = 32/115 (27%), Positives = 59/115 (51%), Gaps = 11/115 (9%)
 Frame = +3

Query:  72 MFFHIVLERNVQLHPRFF-GRNLRENLVSKLMKDV--EGTCSGRHGFVVAITGIESVGKG 242
           MF  + + R+V +  +   G++  + ++ +L++D+  E  C   HGF + IT ++S+G  
Sbjct:   1 MFSEVEMARDVAICAKHLNGQSPHQPILCRLLQDLIHEKACR-EHGFYLGITALKSIGNN 59

Query: 243 LIRD-------GTAFVTFPVKYQCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQ 386
              +           +TFPV + C  F P +G+IL+  V  V   G F  +GP++
Sbjct:  60 KNNNIDNENNHQAKILTFPVSFTCRTFLPARGDILQGTVKKVLWNGAFIRSGPLR 114

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,739,053,950
Number of Sequences: 33410
Number of Extensions: 7739053950
Number of Successful Extensions: 259342262
Number of sequences better than 0.0: 0