BLASTX 7.6.2
Query= UN14947 /QuerySize=1628
(1627 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297812857|ref|XP_002874312.1| RNA helicase [Arabidopsis lyrat... 747 2e-213
gi|79328737|ref|NP_001031943.1| DEAD-box ATP-dependent RNA helic... 746 3e-213
gi|334187954|ref|NP_001190402.1| DEAD-box ATP-dependent RNA heli... 746 3e-213
gi|3775987|emb|CAA09196.1| RNA helicase [Arabidopsis thaliana] 745 9e-213
gi|22135801|gb|AAM91087.1| At5g26740 [Arabidopsis thaliana] 744 1e-212
gi|30690260|ref|NP_680225.2| DEAD-box ATP-dependent RNA helicase... 737 2e-210
gi|225450401|ref|XP_002278318.1| PREDICTED: hypothetical protein... 635 1e-179
gi|255543078|ref|XP_002512602.1| dead box ATP-dependent RNA heli... 611 2e-172
gi|87240993|gb|ABD32851.1| Helicase, C-terminal; Zinc finger, CC... 609 6e-172
gi|108711873|gb|ABF99668.1| DEAD/DEAH box helicase family protei... 589 6e-166
gi|143455890|sp|Q0DM51.2|RH3_ORYSJ RecName: Full=DEAD-box ATP-de... 587 2e-165
gi|108711872|gb|ABF99667.1| DEAD/DEAH box helicase family protei... 587 2e-165
gi|115456345|ref|NP_001051773.1| Os03g0827700 [Oryza sativa Japo... 587 2e-165
gi|218194025|gb|EEC76452.1| hypothetical protein OsI_14162 [Oryz... 587 2e-165
gi|118489724|gb|ABK96663.1| unknown [Populus trichocarpa x Popul... 582 1e-163
gi|224124522|ref|XP_002330044.1| predicted protein [Populus tric... 579 5e-163
gi|224124506|ref|XP_002330040.1| predicted protein [Populus tric... 574 2e-161
gi|47827092|dbj|BAD21122.1| ATP-dependent RNA helicase [Hordeum ... 539 6e-151
gi|212274773|ref|NP_001130659.1| hypothetical protein LOC1001917... 539 7e-151
gi|195612018|gb|ACG27839.1| nucleolar RNA helicase 2 [Zea mays] 538 1e-150
>gi|297812857|ref|XP_002874312.1| RNA helicase [Arabidopsis lyrata subsp.
lyrata]
Length = 748
Score = 747 bits (1926), Expect = 2e-213
Identities = 381/426 (89%), Positives = 395/426 (92%), Gaps = 5/426 (1%)
Frame = +3
Query: 3 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDAGEVSLSLSNSIASEALHG 182
EGIKLYAI+ TSTSKRTILSDLITVYAKGGKTIVFTQTKRDA EVSL+LSNSIA+EALHG
Sbjct: 323 EGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHG 382
Query: 183 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 362
DISQHQRERTLN FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG
Sbjct: 383 DISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 442
Query: 363 RAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADHVVATLNGVHPE 542
RAGKEGSAILMH+SSQKRTVRSLERDVGC FEFISPPTVGDLLE+SAD VVATLN VHP+
Sbjct: 443 RAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNAVHPD 502
Query: 543 SIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPANAR 722
SIKFFSATAQKL+EEKGTDALAAALAHLSGFSQPPSSRSLLSHE+GWVTLQLIRDP NAR
Sbjct: 503 SIKFFSATAQKLYEEKGTDALAAALAHLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNAR 562
Query: 723 GFLSARSVAGFLSDVYRPAADRVGKIFMIADERVQGAVFDLPEDIAKELLENEVPEGNSI 902
GFLSARSV GFLSDVYR AAD VGKIF+IAD+RVQGAVFDLPE+IAKELLE EVPEGNS+
Sbjct: 563 GFLSARSVTGFLSDVYRTAADEVGKIFLIADDRVQGAVFDLPEEIAKELLEKEVPEGNSL 622
Query: 903 SLITKLPALQDDGPSSDNYGRFSSRDRMPRGGGGSRGSRFCGRGGGSSRGRDSWGGDDDR 1082
S+ITKLP LQDDGPSSDNYGRFSSRDRMPRGGGGSRGSR G GGSSRGRDSWGGDDDR
Sbjct: 623 SMITKLPPLQDDGPSSDNYGRFSSRDRMPRGGGGSRGSR--GGRGGSSRGRDSWGGDDDR 680
Query: 1083 RSRSSGGGGSSWSRGGGGGSRGSFDDWLIGGGSDRRSSSRAPFRERSFGGACFNCGSSGH 1262
SR S GGGSSWSR GG SRGS DDWLIGG S SSSRAP RERSFGG+CF CG SGH
Sbjct: 681 GSRRSSGGGSSWSR-GGSSSRGSSDDWLIGGRSS--SSSRAPSRERSFGGSCFICGKSGH 737
Query: 1263 RAADCP 1280
RA DCP
Sbjct: 738 RATDCP 743
>gi|79328737|ref|NP_001031943.1| DEAD-box ATP-dependent RNA helicase 3
[Arabidopsis thaliana]
Length = 748
Score = 746 bits (1925), Expect = 3e-213
Identities = 379/426 (88%), Positives = 396/426 (92%), Gaps = 5/426 (1%)
Frame = +3
Query: 3 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDAGEVSLSLSNSIASEALHG 182
EGIKLYAI+ TSTSKRTILSDLITVYAKGGKTIVFTQTKRDA EVSL+LSNSIA+EALHG
Sbjct: 323 EGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHG 382
Query: 183 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 362
DISQHQRERTLN FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG
Sbjct: 383 DISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 442
Query: 363 RAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADHVVATLNGVHPE 542
RAGKEGSAILMH+SSQKRTVRSLERDVGC FEFISPPTVGDLLE+SAD VVATLNGVHP+
Sbjct: 443 RAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPD 502
Query: 543 SIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPANAR 722
SIKFFSATAQKL+EEKGTDALAAALAHLSGFSQPPSSRSLLSHE+GWVTLQLIRDP NAR
Sbjct: 503 SIKFFSATAQKLYEEKGTDALAAALAHLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNAR 562
Query: 723 GFLSARSVAGFLSDVYRPAADRVGKIFMIADERVQGAVFDLPEDIAKELLENEVPEGNSI 902
GFLSARSV GFLSD+YR AAD VGKIF+IAD+R+QGAVFDLPE+IAKELLE +VPEGNS+
Sbjct: 563 GFLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSL 622
Query: 903 SLITKLPALQDDGPSSDNYGRFSSRDRMPRGGGGSRGSRFCGRGGGSSRGRDSWGGDDDR 1082
S+ITKLP LQDDGPSSDNYGRFSSRDRMPRGGGGSRGSR G GGSSRGRDSWGGDDDR
Sbjct: 623 SMITKLPPLQDDGPSSDNYGRFSSRDRMPRGGGGSRGSR--GGRGGSSRGRDSWGGDDDR 680
Query: 1083 RSRSSGGGGSSWSRGGGGGSRGSFDDWLIGGGSDRRSSSRAPFRERSFGGACFNCGSSGH 1262
SR S GGGSSWSR GG SRGS DDWLIGG S SSSRAP RERSFGG+CF CG SGH
Sbjct: 681 GSRRSSGGGSSWSR-GGSSSRGSSDDWLIGGRSS--SSSRAPSRERSFGGSCFICGKSGH 737
Query: 1263 RAADCP 1280
RA DCP
Sbjct: 738 RATDCP 743
>gi|334187954|ref|NP_001190402.1| DEAD-box ATP-dependent RNA helicase 3
[Arabidopsis thaliana]
Length = 655
Score = 746 bits (1925), Expect = 3e-213
Identities = 379/426 (88%), Positives = 396/426 (92%), Gaps = 5/426 (1%)
Frame = +3
Query: 3 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDAGEVSLSLSNSIASEALHG 182
EGIKLYAI+ TSTSKRTILSDLITVYAKGGKTIVFTQTKRDA EVSL+LSNSIA+EALHG
Sbjct: 230 EGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHG 289
Query: 183 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 362
DISQHQRERTLN FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG
Sbjct: 290 DISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 349
Query: 363 RAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADHVVATLNGVHPE 542
RAGKEGSAILMH+SSQKRTVRSLERDVGC FEFISPPTVGDLLE+SAD VVATLNGVHP+
Sbjct: 350 RAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPD 409
Query: 543 SIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPANAR 722
SIKFFSATAQKL+EEKGTDALAAALAHLSGFSQPPSSRSLLSHE+GWVTLQLIRDP NAR
Sbjct: 410 SIKFFSATAQKLYEEKGTDALAAALAHLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNAR 469
Query: 723 GFLSARSVAGFLSDVYRPAADRVGKIFMIADERVQGAVFDLPEDIAKELLENEVPEGNSI 902
GFLSARSV GFLSD+YR AAD VGKIF+IAD+R+QGAVFDLPE+IAKELLE +VPEGNS+
Sbjct: 470 GFLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSL 529
Query: 903 SLITKLPALQDDGPSSDNYGRFSSRDRMPRGGGGSRGSRFCGRGGGSSRGRDSWGGDDDR 1082
S+ITKLP LQDDGPSSDNYGRFSSRDRMPRGGGGSRGSR G GGSSRGRDSWGGDDDR
Sbjct: 530 SMITKLPPLQDDGPSSDNYGRFSSRDRMPRGGGGSRGSR--GGRGGSSRGRDSWGGDDDR 587
Query: 1083 RSRSSGGGGSSWSRGGGGGSRGSFDDWLIGGGSDRRSSSRAPFRERSFGGACFNCGSSGH 1262
SR S GGGSSWSR GG SRGS DDWLIGG S SSSRAP RERSFGG+CF CG SGH
Sbjct: 588 GSRRSSGGGSSWSR-GGSSSRGSSDDWLIGGRSS--SSSRAPSRERSFGGSCFICGKSGH 644
Query: 1263 RAADCP 1280
RA DCP
Sbjct: 645 RATDCP 650
>gi|3775987|emb|CAA09196.1| RNA helicase [Arabidopsis thaliana]
Length = 748
Score = 745 bits (1921), Expect = 9e-213
Identities = 379/426 (88%), Positives = 396/426 (92%), Gaps = 5/426 (1%)
Frame = +3
Query: 3 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDAGEVSLSLSNSIASEALHG 182
EGIKLYAI+ TSTSKRTILSDLITVYAKGGKTIVFTQTKRDA EVSL+LSNSIA+EALHG
Sbjct: 323 EGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHG 382
Query: 183 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 362
DISQHQRERTLN FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG
Sbjct: 383 DISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 442
Query: 363 RAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADHVVATLNGVHPE 542
RAGKEGSAILMH+SSQKRTVRSLERDVGC FEFISPPTVGDLLE+SAD VVATLNGVHP+
Sbjct: 443 RAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPD 502
Query: 543 SIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPANAR 722
SIKFFSATAQKL+EEKGTDALAAALAHLSGFSQPPSSRSLLSHE+GWVTLQLIRDP NAR
Sbjct: 503 SIKFFSATAQKLYEEKGTDALAAALAHLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNAR 562
Query: 723 GFLSARSVAGFLSDVYRPAADRVGKIFMIADERVQGAVFDLPEDIAKELLENEVPEGNSI 902
GFLSARSV GFLSD+YR AAD VGKIF+IAD+R+QGAVFDLPE+IAKELLE +VPEGNS+
Sbjct: 563 GFLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSL 622
Query: 903 SLITKLPALQDDGPSSDNYGRFSSRDRMPRGGGGSRGSRFCGRGGGSSRGRDSWGGDDDR 1082
S+ITKLP LQDDGPSSDNYGRFSSRDRMPRGGGGSRGSR G GGSSRGRDSWGGDDDR
Sbjct: 623 SMITKLPPLQDDGPSSDNYGRFSSRDRMPRGGGGSRGSR--GGRGGSSRGRDSWGGDDDR 680
Query: 1083 RSRSSGGGGSSWSRGGGGGSRGSFDDWLIGGGSDRRSSSRAPFRERSFGGACFNCGSSGH 1262
SR S GGGSSWSR GG SRGS DDWLIGG S SSSRAP RERSFGG+CF CG SGH
Sbjct: 681 GSRRSIGGGSSWSR-GGSSSRGSSDDWLIGGRSS--SSSRAPSRERSFGGSCFICGKSGH 737
Query: 1263 RAADCP 1280
RA DCP
Sbjct: 738 RATDCP 743
>gi|22135801|gb|AAM91087.1| At5g26740 [Arabidopsis thaliana]
Length = 748
Score = 744 bits (1920), Expect = 1e-212
Identities = 378/426 (88%), Positives = 395/426 (92%), Gaps = 5/426 (1%)
Frame = +3
Query: 3 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDAGEVSLSLSNSIASEALHG 182
EGIKLYAI+ TSTSKRTILSDLITVYAKGGK IVFTQTKRDA EVSL+LSNSIA+EALHG
Sbjct: 323 EGIKLYAIATTSTSKRTILSDLITVYAKGGKNIVFTQTKRDADEVSLALSNSIATEALHG 382
Query: 183 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 362
DISQHQRERTLN FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG
Sbjct: 383 DISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 442
Query: 363 RAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADHVVATLNGVHPE 542
RAGKEGSAILMH+SSQKRTVRSLERDVGC FEFISPPTVGDLLE+SAD VVATLNGVHP+
Sbjct: 443 RAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPD 502
Query: 543 SIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPANAR 722
SIKFFSATAQKL+EEKGTDALAAALAHLSGFSQPPSSRSLLSHE+GWVTLQLIRDP NAR
Sbjct: 503 SIKFFSATAQKLYEEKGTDALAAALAHLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNAR 562
Query: 723 GFLSARSVAGFLSDVYRPAADRVGKIFMIADERVQGAVFDLPEDIAKELLENEVPEGNSI 902
GFLSARSV GFLSD+YR AAD VGKIF+IAD+R+QGAVFDLPE+IAKELLE +VPEGNS+
Sbjct: 563 GFLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSL 622
Query: 903 SLITKLPALQDDGPSSDNYGRFSSRDRMPRGGGGSRGSRFCGRGGGSSRGRDSWGGDDDR 1082
S+ITKLP LQDDGPSSDNYGRFSSRDRMPRGGGGSRGSR G GGSSRGRDSWGGDDDR
Sbjct: 623 SMITKLPPLQDDGPSSDNYGRFSSRDRMPRGGGGSRGSR--GGRGGSSRGRDSWGGDDDR 680
Query: 1083 RSRSSGGGGSSWSRGGGGGSRGSFDDWLIGGGSDRRSSSRAPFRERSFGGACFNCGSSGH 1262
SR S GGGSSWSR GG SRGS DDWLIGG S SSSRAP RERSFGG+CF CG SGH
Sbjct: 681 GSRRSSGGGSSWSR-GGSSSRGSSDDWLIGGRSS--SSSRAPSRERSFGGSCFICGKSGH 737
Query: 1263 RAADCP 1280
RA DCP
Sbjct: 738 RATDCP 743
>gi|30690260|ref|NP_680225.2| DEAD-box ATP-dependent RNA helicase 3 [Arabidopsis
thaliana]
Length = 747
Score = 737 bits (1901), Expect = 2e-210
Identities = 377/425 (88%), Positives = 394/425 (92%), Gaps = 6/425 (1%)
Frame = +3
Query: 3 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDAGEVSLSLSNSIASEALHG 182
EGIKLYAI+ TSTSKRTILSDLITVYAKGGKTIVFTQTKRDA EVSL+LSNSIA+EALHG
Sbjct: 323 EGIKLYAIATTSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALSNSIATEALHG 382
Query: 183 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 362
DISQHQRERTLN FRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG
Sbjct: 383 DISQHQRERTLNAFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 442
Query: 363 RAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADHVVATLNGVHPE 542
RAGKEGSAILMH+SSQKRTVRSLERDVGC FEFISPPTVGDLLE+SAD VVATLNGVHP+
Sbjct: 443 RAGKEGSAILMHTSSQKRTVRSLERDVGCHFEFISPPTVGDLLESSADQVVATLNGVHPD 502
Query: 543 SIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPANAR 722
SIKFFSATAQKL+EEKGTDALAAALAHLSGFSQPPSSRSLLSHE+GWVTLQLIRDP NAR
Sbjct: 503 SIKFFSATAQKLYEEKGTDALAAALAHLSGFSQPPSSRSLLSHEKGWVTLQLIRDPTNAR 562
Query: 723 GFLSARSVAGFLSDVYRPAADRVGKIFMIADERVQGAVFDLPEDIAKELLENEVPEGNSI 902
GFLSARSV GFLSD+YR AAD VGKIF+IAD+R+QGAVFDLPE+IAKELLE +VPEGNS+
Sbjct: 563 GFLSARSVTGFLSDLYRTAADEVGKIFLIADDRIQGAVFDLPEEIAKELLEKDVPEGNSL 622
Query: 903 SLITKLPALQDDGPSSDNYGRFSSRDRMPRGGGGSRGSRFCGRGGGSSRGRDSWGGDDDR 1082
S+ITKLP LQDDGPSSDNYGRFSSRDRMPRGGGGSRGSR G GGSSRGRDSWGGDDDR
Sbjct: 623 SMITKLPPLQDDGPSSDNYGRFSSRDRMPRGGGGSRGSR--GGRGGSSRGRDSWGGDDDR 680
Query: 1083 RSRSSGGGGSSWSRGGGGGSRGSFDDWLIGGGSDRRSSSRAPFRERSFGGACFNCGSSGH 1262
SR S GGGSSWSR GG SRGS DDWLIGG S SSSRAP RE SFGG+CF CG SGH
Sbjct: 681 GSRRSSGGGSSWSR-GGSSSRGSSDDWLIGGRSS--SSSRAPSRE-SFGGSCFICGKSGH 736
Query: 1263 RAADC 1277
RA DC
Sbjct: 737 RATDC 741
>gi|225450401|ref|XP_002278318.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 764
Score = 635 bits (1636), Expect = 1e-179
Identities = 324/429 (75%), Positives = 362/429 (84%), Gaps = 5/429 (1%)
Frame = +3
Query: 3 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDAGEVSLSLSNSIASEALHG 182
EGIKLYAI T+TSKRTILSDLITVYAKGGKTIVFTQTKRDA EVS++L+NSIASEALHG
Sbjct: 337 EGIKLYAIPTTATSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSMALTNSIASEALHG 396
Query: 183 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 362
DISQHQRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRTG
Sbjct: 397 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 456
Query: 363 RAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADHVVATLNGVHPE 542
RAGKEG+AILM +SSQ+RTV+SLERDVGC+FEFISPP + ++LE+SA+ VVATLNGVHPE
Sbjct: 457 RAGKEGTAILMFTSSQRRTVKSLERDVGCKFEFISPPAIEEVLESSAEQVVATLNGVHPE 516
Query: 543 SIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPANAR 722
S++FF+ TAQKL EEKGT ALAAALAHLSGFSQPPS RSL+SHEQGWVTLQL RD +R
Sbjct: 517 SVEFFTPTAQKLIEEKGTGALAAALAHLSGFSQPPSFRSLISHEQGWVTLQLTRDSGYSR 576
Query: 723 GFLSARSVAGFLSDVYRPAADRVGKIFMIADERVQGAVFDLPEDIAKELLENEVPEGNSI 902
GFLSARSV GFLSDVY AAD +GKI+++ADERVQGAVFDLPE+IAKELL ++P GN+I
Sbjct: 577 GFLSARSVTGFLSDVYPTAADELGKIYLVADERVQGAVFDLPEEIAKELLNKQMPPGNTI 636
Query: 903 SLITKLPALQDDGPSSDNYGRFSSRDRMPRGGGGSRGSRFCGRGGGSSRGRDSWGGDD-D 1079
S ITKLPALQDDGP+ D YGRFS+RDR RGG R RG GSS G D GGDD +
Sbjct: 637 SKITKLPALQDDGPAGDYYGRFSNRDRSSRGGSRERRGSRISRGRGSSWGSDDDGGDDLN 696
Query: 1080 RRSRSSGGGGSSWSRGGGGGSRGSFDDWLIGGGSDRRSSSRAPFRERSFGGACFNCGSSG 1259
RR S ++WSR R S DDWLIGG RSSS RERSFGG+CF CG SG
Sbjct: 697 RRGGRSFRSNNNWSR----NLRTSEDDWLIGGRRSNRSSSSFGSRERSFGGSCFTCGRSG 752
Query: 1260 HRAADCPDK 1286
HRA++CP+K
Sbjct: 753 HRASECPNK 761
>gi|255543078|ref|XP_002512602.1| dead box ATP-dependent RNA helicase, putative
[Ricinus communis]
Length = 772
Score = 611 bits (1573), Expect = 2e-172
Identities = 322/438 (73%), Positives = 360/438 (82%), Gaps = 11/438 (2%)
Frame = +3
Query: 3 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDAGEVSLSLSNSIASEALHG 182
EGIKLYAIS +TSKR+ILSDL+TVYAKGGKTI+FTQTKRDA EVS+ L+NSIASEALHG
Sbjct: 339 EGIKLYAISTNATSKRSILSDLVTVYAKGGKTIIFTQTKRDADEVSMVLTNSIASEALHG 398
Query: 183 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 362
DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG
Sbjct: 399 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 458
Query: 363 RAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADHVVATLNGVHPE 542
RAGKEG+A+LM +SSQ+RTV+SLERDVGCRFEF+SPP ++LE+SA+ V+ATL+GVHPE
Sbjct: 459 RAGKEGTAVLMFTSSQRRTVKSLERDVGCRFEFVSPPGTEEVLESSAEQVIATLSGVHPE 518
Query: 543 SIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPANAR 722
S+ FF+ TAQ+L EE+GT ALAAALA LSGFSQPPSSRSL+SHEQGW TLQL RDP+ +R
Sbjct: 519 SVGFFTPTAQRLIEEQGTSALAAALAQLSGFSQPPSSRSLISHEQGWTTLQLTRDPSYSR 578
Query: 723 GFLSARSVAGFLSDVYRPAADRVGKIFMIADERVQGAVFDLPEDIAKELLENEVPEGNSI 902
GFLSARSV GFLSDVY AAD VGKI +IADE+VQGAVFDLPE+IAKELL ++P GN+I
Sbjct: 579 GFLSARSVTGFLSDVYTAAADEVGKIHIIADEKVQGAVFDLPEEIAKELLNKQLPPGNTI 638
Query: 903 SLITKLPALQDDGPSSDNYGRFSSRDRMPRGGG-GSRGSRFCGRGGGSSRGRDSWGGDDD 1079
S ITKLP+LQDDGP SD YGRFSSRDR PRGGG G RGSR GG GR+S DD
Sbjct: 639 SKITKLPSLQDDGPPSDFYGRFSSRDRPPRGGGRGQRGSRSSQGWGGGRGGRNSDDDDDT 698
Query: 1080 --RRSRS-SGGGGSSWSRGGGGGSRGSFDDWLIGGGSDRRSSS---RAPFRERSFGGACF 1241
R RS S W GGG SR S G S R SS R+ R+RSFGG+CF
Sbjct: 699 FRRGGRSFSRSSSDDWLIGGGRSSRPS----PRGRSSPRDWSSPRDRSSPRDRSFGGSCF 754
Query: 1242 NCGSSGHRAADCPDKRGF 1295
NCG SGHRA+DCP+K F
Sbjct: 755 NCGRSGHRASDCPNKLDF 772
>gi|87240993|gb|ABD32851.1| Helicase, C-terminal; Zinc finger, CCHC-type; GUCT
[Medicago truncatula]
Length = 753
Score = 609 bits (1569), Expect = 6e-172
Identities = 315/428 (73%), Positives = 348/428 (81%), Gaps = 8/428 (1%)
Frame = +3
Query: 3 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDAGEVSLSLSNSIASEALHG 182
EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDA EVSL+L+NSI SEALHG
Sbjct: 327 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDADEVSLALTNSITSEALHG 386
Query: 183 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 362
DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDL+IHYELPNDPETFVHRSGRTG
Sbjct: 387 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRTG 446
Query: 363 RAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADHVVATLNGVHPE 542
RAGK G+AILM + SQ+RTVRSLERDVGC+FEF++ P+V D+LE+SA+ VV TLNGVHPE
Sbjct: 447 RAGKLGTAILMFTGSQRRTVRSLERDVGCKFEFVNAPSVEDVLESSAEQVVVTLNGVHPE 506
Query: 543 SIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPANAR 722
SI FF+ TAQKL EEKGT ALAAALA +SGFSQPPSSRSL++HEQGWVTLQL RD N++
Sbjct: 507 SIAFFTPTAQKLIEEKGTTALAAALAQMSGFSQPPSSRSLITHEQGWVTLQLTRDSENSQ 566
Query: 723 GFLSARSVAGFLSDVYRPAADRVGKIFMIADERVQGAVFDLPEDIAKELLENEVPEGNSI 902
+ SARSV GFLSDVY AAD VGK+ +IADERVQGAVFDLPEDIAKELL+ ++P GN+I
Sbjct: 567 RYFSARSVTGFLSDVYSKAADEVGKVHLIADERVQGAVFDLPEDIAKELLDKDIPAGNTI 626
Query: 903 SLITKLPALQDDGPSSDNYGRFSSRDRMPRGGGGSRGSRF-CGRGGGSSRGRDSWGGDDD 1079
S +TKLP LQDDGP SD YG+FS R+R R GG G F RG RG D GD
Sbjct: 627 SKVTKLPPLQDDGPPSDFYGKFSDRERNNRRGGSRDGRGFRSSRGWDGGRGSDDDFGDSS 686
Query: 1080 RRSRSSGGGGSSWSRGGGGGSRGSFDDWLIGGGSDRRSSSRAPFRERSFGGACFNCGSSG 1259
RR S G+SWS+ R S DDWLIGG RSSS RSF G CF CG SG
Sbjct: 687 RRGGRSYKSGNSWSK----PERSSRDDWLIGGRQSSRSSSSP---NRSFAGTCFTCGESG 739
Query: 1260 HRAADCPD 1283
HRA+DCP+
Sbjct: 740 HRASDCPN 747
>gi|108711873|gb|ABF99668.1| DEAD/DEAH box helicase family protein, expressed
[Oryza sativa Japonica Group]
Length = 596
Score = 589 bits (1517), Expect = 6e-166
Identities = 313/443 (70%), Positives = 353/443 (79%), Gaps = 23/443 (5%)
Frame = +3
Query: 3 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDAGEVSLSLSNSIASEALHG 182
EGIKLYAI TSTSKRT+LSDLITVYAKGGKTIVFT+TKRDA EVSL+L+NSIASEALHG
Sbjct: 162 EGIKLYAIPLTSTSKRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHG 221
Query: 183 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 362
DISQHQRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRTG
Sbjct: 222 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 281
Query: 363 RAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADHVVATLNGVHPE 542
RAGK G+AILM ++SQ+RTVRSLERDVGCRF+FISPP + D+LE+SA+HV+ATL GVH E
Sbjct: 282 RAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHTE 341
Query: 543 SIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPANAR 722
SI++F A++L EE G +ALA+ALAHLSGFSQPPSSRSL+SHEQGWVTLQL RDP R
Sbjct: 342 SIQYFIPAAERLQEELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGYGR 401
Query: 723 GFLSARSVAGFLSDVYRPAADRVGKIFMIADERVQGAVFDLPEDIAKELLENEVPEGNSI 902
GF S RSV GFLSDV AAD VGKIF+ ADE+VQGAVFDLPE+IA++LL E+P GN+I
Sbjct: 402 GFFSPRSVTGFLSDVSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLSMELPPGNTI 461
Query: 903 SLITKLPALQDDGPSSDNYGRFSSRDRMPRG----GGGSRGSRFCGRGGGSSRGRD---- 1058
+ +TKLPALQDDGP++D+YGRFS+ DR R GGGSRG GRGG S G D
Sbjct: 462 TKVTKLPALQDDGPATDSYGRFSNSDRGFRNRRSRGGGSRG----GRGGWDSDGEDRFRR 517
Query: 1059 ---SWGGDDDRRSRSSGGGG----SSWSRGGGGGSRGSFDDWLIGGGSDRRSSSRAPFRE 1217
S+ D+D S GGG S S GG G S GS GG RSSS
Sbjct: 518 GGRSFRSDNDSWSDDDFGGGRRSNRSSSFGGRGSSYGSRSSSSFGG----RSSSFGSRDS 573
Query: 1218 RSFGGACFNCGSSGHRAADCPDK 1286
RSF GACFNCG SGHRA+DCP+K
Sbjct: 574 RSFSGACFNCGESGHRASDCPNK 596
>gi|143455890|sp|Q0DM51.2|RH3_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA
helicase 3, chloroplastic; Flags: Precursor
Length = 758
Score = 587 bits (1513), Expect = 2e-165
Identities = 312/443 (70%), Positives = 353/443 (79%), Gaps = 22/443 (4%)
Frame = +3
Query: 3 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDAGEVSLSLSNSIASEALHG 182
EGIKLYAI TSTSKRT+LSDLITVYAKGGKTIVFT+TKRDA EVSL+L+NSIASEALHG
Sbjct: 323 EGIKLYAIPLTSTSKRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHG 382
Query: 183 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 362
DISQHQRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRTG
Sbjct: 383 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 442
Query: 363 RAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADHVVATLNGVHPE 542
RAGK G+AILM ++SQ+RTVRSLERDVGCRF+FISPP + D+LE+SA+HV+ATL GVH E
Sbjct: 443 RAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHTE 502
Query: 543 SIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPANAR 722
SI++F A++L EE G +ALA+ALAHLSGFSQPPSSRSL+SHEQGWVTLQL RDP R
Sbjct: 503 SIQYFIPAAERLQEELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGYGR 562
Query: 723 GFLSARSVAGFLSDVYRPAADRVGKIFMIADERVQGAVFDLPEDIAKELLENEVPEGNSI 902
GF S RSV GFLSDV AAD VGKIF+ ADE+VQGAVFDLPE+IA++LL E+P GN+I
Sbjct: 563 GFFSPRSVTGFLSDVSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLSMELPPGNTI 622
Query: 903 SLITKLPALQDDGPSSDNYGRFSSRDRMPRG----GGGSRGSRFCGRGGGSSRGRD---- 1058
+ +TKLPALQDDGP++D+YGRFS+ DR R GGGSRG GRGG S G D
Sbjct: 623 TKVTKLPALQDDGPATDSYGRFSNSDRGFRNRRSRGGGSRG----GRGGWDSDGEDRFRR 678
Query: 1059 ---SWGGDDDRRSRSSGGGG----SSWSRGGGGGSRGSFDDWLIGGGSDRRSSSRAPFRE 1217
S+ D+D S GGG S S GG G S GS GG R SS +
Sbjct: 679 GGRSFRSDNDSWSDDDFGGGRRSNRSSSFGGRGSSYGSRSSSSFGG---RSSSFGSRDSS 735
Query: 1218 RSFGGACFNCGSSGHRAADCPDK 1286
RSF GACFNCG SGHRA+DCP+K
Sbjct: 736 RSFSGACFNCGESGHRASDCPNK 758
>gi|108711872|gb|ABF99667.1| DEAD/DEAH box helicase family protein, expressed
[Oryza sativa Japonica Group]
Length = 597
Score = 587 bits (1513), Expect = 2e-165
Identities = 312/443 (70%), Positives = 353/443 (79%), Gaps = 22/443 (4%)
Frame = +3
Query: 3 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDAGEVSLSLSNSIASEALHG 182
EGIKLYAI TSTSKRT+LSDLITVYAKGGKTIVFT+TKRDA EVSL+L+NSIASEALHG
Sbjct: 162 EGIKLYAIPLTSTSKRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHG 221
Query: 183 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 362
DISQHQRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRTG
Sbjct: 222 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 281
Query: 363 RAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADHVVATLNGVHPE 542
RAGK G+AILM ++SQ+RTVRSLERDVGCRF+FISPP + D+LE+SA+HV+ATL GVH E
Sbjct: 282 RAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHTE 341
Query: 543 SIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPANAR 722
SI++F A++L EE G +ALA+ALAHLSGFSQPPSSRSL+SHEQGWVTLQL RDP R
Sbjct: 342 SIQYFIPAAERLQEELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGYGR 401
Query: 723 GFLSARSVAGFLSDVYRPAADRVGKIFMIADERVQGAVFDLPEDIAKELLENEVPEGNSI 902
GF S RSV GFLSDV AAD VGKIF+ ADE+VQGAVFDLPE+IA++LL E+P GN+I
Sbjct: 402 GFFSPRSVTGFLSDVSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLSMELPPGNTI 461
Query: 903 SLITKLPALQDDGPSSDNYGRFSSRDRMPRG----GGGSRGSRFCGRGGGSSRGRD---- 1058
+ +TKLPALQDDGP++D+YGRFS+ DR R GGGSRG GRGG S G D
Sbjct: 462 TKVTKLPALQDDGPATDSYGRFSNSDRGFRNRRSRGGGSRG----GRGGWDSDGEDRFRR 517
Query: 1059 ---SWGGDDDRRSRSSGGGG----SSWSRGGGGGSRGSFDDWLIGGGSDRRSSSRAPFRE 1217
S+ D+D S GGG S S GG G S GS GG R SS +
Sbjct: 518 GGRSFRSDNDSWSDDDFGGGRRSNRSSSFGGRGSSYGSRSSSSFGG---RSSSFGSRDSS 574
Query: 1218 RSFGGACFNCGSSGHRAADCPDK 1286
RSF GACFNCG SGHRA+DCP+K
Sbjct: 575 RSFSGACFNCGESGHRASDCPNK 597
>gi|115456345|ref|NP_001051773.1| Os03g0827700 [Oryza sativa Japonica Group]
Length = 723
Score = 587 bits (1513), Expect = 2e-165
Identities = 312/443 (70%), Positives = 353/443 (79%), Gaps = 22/443 (4%)
Frame = +3
Query: 3 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDAGEVSLSLSNSIASEALHG 182
EGIKLYAI TSTSKRT+LSDLITVYAKGGKTIVFT+TKRDA EVSL+L+NSIASEALHG
Sbjct: 288 EGIKLYAIPLTSTSKRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHG 347
Query: 183 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 362
DISQHQRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRTG
Sbjct: 348 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 407
Query: 363 RAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADHVVATLNGVHPE 542
RAGK G+AILM ++SQ+RTVRSLERDVGCRF+FISPP + D+LE+SA+HV+ATL GVH E
Sbjct: 408 RAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHTE 467
Query: 543 SIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPANAR 722
SI++F A++L EE G +ALA+ALAHLSGFSQPPSSRSL+SHEQGWVTLQL RDP R
Sbjct: 468 SIQYFIPAAERLQEELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGYGR 527
Query: 723 GFLSARSVAGFLSDVYRPAADRVGKIFMIADERVQGAVFDLPEDIAKELLENEVPEGNSI 902
GF S RSV GFLSDV AAD VGKIF+ ADE+VQGAVFDLPE+IA++LL E+P GN+I
Sbjct: 528 GFFSPRSVTGFLSDVSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLSMELPPGNTI 587
Query: 903 SLITKLPALQDDGPSSDNYGRFSSRDRMPRG----GGGSRGSRFCGRGGGSSRGRD---- 1058
+ +TKLPALQDDGP++D+YGRFS+ DR R GGGSRG GRGG S G D
Sbjct: 588 TKVTKLPALQDDGPATDSYGRFSNSDRGFRNRRSRGGGSRG----GRGGWDSDGEDRFRR 643
Query: 1059 ---SWGGDDDRRSRSSGGGG----SSWSRGGGGGSRGSFDDWLIGGGSDRRSSSRAPFRE 1217
S+ D+D S GGG S S GG G S GS GG R SS +
Sbjct: 644 GGRSFRSDNDSWSDDDFGGGRRSNRSSSFGGRGSSYGSRSSSSFGG---RSSSFGSRDSS 700
Query: 1218 RSFGGACFNCGSSGHRAADCPDK 1286
RSF GACFNCG SGHRA+DCP+K
Sbjct: 701 RSFSGACFNCGESGHRASDCPNK 723
>gi|218194025|gb|EEC76452.1| hypothetical protein OsI_14162 [Oryza sativa Indica
Group]
Length = 779
Score = 587 bits (1513), Expect = 2e-165
Identities = 312/443 (70%), Positives = 353/443 (79%), Gaps = 22/443 (4%)
Frame = +3
Query: 3 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDAGEVSLSLSNSIASEALHG 182
EGIKLYAI TSTSKRT+LSDLITVYAKGGKTIVFT+TKRDA EVSL+L+NSIASEALHG
Sbjct: 344 EGIKLYAIPLTSTSKRTVLSDLITVYAKGGKTIVFTKTKRDADEVSLALTNSIASEALHG 403
Query: 183 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 362
DISQHQRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRTG
Sbjct: 404 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 463
Query: 363 RAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADHVVATLNGVHPE 542
RAGK G+AILM ++SQ+RTVRSLERDVGCRF+FISPP + D+LE+SA+HV+ATL GVH E
Sbjct: 464 RAGKAGTAILMFTNSQRRTVRSLERDVGCRFDFISPPAIEDVLESSAEHVIATLRGVHTE 523
Query: 543 SIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPANAR 722
SI++F A++L EE G +ALA+ALAHLSGFSQPPSSRSL+SHEQGWVTLQL RDP R
Sbjct: 524 SIQYFIPAAERLQEELGPNALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTRDPGYGR 583
Query: 723 GFLSARSVAGFLSDVYRPAADRVGKIFMIADERVQGAVFDLPEDIAKELLENEVPEGNSI 902
GF S RSV GFLSDV AAD VGKIF+ ADE+VQGAVFDLPE+IA++LL E+P GN+I
Sbjct: 584 GFFSPRSVTGFLSDVSSAAADEVGKIFLTADEKVQGAVFDLPEEIARDLLSMELPPGNTI 643
Query: 903 SLITKLPALQDDGPSSDNYGRFSSRDRMPRG----GGGSRGSRFCGRGGGSSRGRD---- 1058
+ +TKLPALQDDGP++D+YGRFS+ DR R GGGSRG GRGG S G D
Sbjct: 644 TKVTKLPALQDDGPATDSYGRFSNSDRGFRNRRSRGGGSRG----GRGGWDSDGEDRFRR 699
Query: 1059 ---SWGGDDDRRSRSSGGGG----SSWSRGGGGGSRGSFDDWLIGGGSDRRSSSRAPFRE 1217
S+ D+D S GGG S S GG G S GS GG R SS +
Sbjct: 700 GGRSFRSDNDSWSDDDFGGGRRSNRSSSFGGRGSSYGSRSSSSFGG---RSSSFGSRDSS 756
Query: 1218 RSFGGACFNCGSSGHRAADCPDK 1286
RSF GACFNCG SGHRA+DCP+K
Sbjct: 757 RSFSGACFNCGESGHRASDCPNK 779
>gi|118489724|gb|ABK96663.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 481
Score = 582 bits (1498), Expect = 1e-163
Identities = 302/401 (75%), Positives = 337/401 (84%), Gaps = 7/401 (1%)
Frame = +3
Query: 3 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDAGEVSLSLSNSIASEALHG 182
EGIKLYA+SAT+ SKRTILSDL+TVYAKGGKTI+FTQTKRDA EVS++L+N+IASEALHG
Sbjct: 60 EGIKLYALSATAASKRTILSDLVTVYAKGGKTIIFTQTKRDADEVSMALTNTIASEALHG 119
Query: 183 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 362
DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDL+IHYELPND ETFVHRSGRTG
Sbjct: 120 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRSGRTG 179
Query: 363 RAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADHVVATLNGVHPE 542
RAGKEG+AILM +SSQ+RTVRSLERD GC+FEF+SPP + ++LE+SA+ VVATL+GVHPE
Sbjct: 180 RAGKEGTAILMFTSSQRRTVRSLERDAGCKFEFVSPPAIEEVLESSAEQVVATLSGVHPE 239
Query: 543 SIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPANAR 722
S++FF+ TAQKL EE+GT+ALAAALAHLSGFSQPPSSRSL+SHEQGW TLQL RDP +R
Sbjct: 240 SVEFFTPTAQKLIEEQGTNALAAALAHLSGFSQPPSSRSLISHEQGWATLQLTRDPTYSR 299
Query: 723 GFLSARSVAGFLSDVYRPAADRVGKIFMIADERVQGAVFDLPEDIAKELLENEVPEGNSI 902
GFLSARSV GFLSDVY AAD VGKI +IADERVQGAVFDLPE+IAKELL ++P GN+I
Sbjct: 300 GFLSARSVTGFLSDVYPAAADEVGKIHVIADERVQGAVFDLPEEIAKELLNKQIPPGNTI 359
Query: 903 SLITKLPALQDDGPSSDNYGRFSSRDRMPRGG-GGSRGSRFCGRGGGSSRGRDSWGGDDD 1079
+ ITKLPALQDDGP D YGRFSSRDR RGG G RG RG GS GRDS G
Sbjct: 360 AKITKLPALQDDGPPGDFYGRFSSRDRPARGGPRGQRGGFRSSRGRGS--GRDSDDGGTY 417
Query: 1080 RRSRSSGGGGSSWSRGGGGGSRGSFDDWLIGGGSDRRSSSR 1202
RR S +SWS+ SR S DDWLIGG R SR
Sbjct: 418 RRGGRSNSNENSWSQ----MSRSSGDDWLIGGRRSSRPPSR 454
>gi|224124522|ref|XP_002330044.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 579 bits (1492), Expect = 5e-163
Identities = 301/401 (75%), Positives = 336/401 (83%), Gaps = 7/401 (1%)
Frame = +3
Query: 3 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDAGEVSLSLSNSIASEALHG 182
EGIKLYA+SAT+ SKRTILSDL+TVYAKGGKTI+FTQTKRDA EVS++L+N+IASEALHG
Sbjct: 354 EGIKLYALSATAASKRTILSDLVTVYAKGGKTIIFTQTKRDADEVSMALTNTIASEALHG 413
Query: 183 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 362
DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDL+IHYELPND ETFVHRSGRTG
Sbjct: 414 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDAETFVHRSGRTG 473
Query: 363 RAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADHVVATLNGVHPE 542
RAGKEG+AILM +SSQ+RTVRSLERD GC+FEF+SPP + ++LE+SA+ VVATL+GVHPE
Sbjct: 474 RAGKEGTAILMFTSSQRRTVRSLERDAGCKFEFVSPPAIEEVLESSAEQVVATLSGVHPE 533
Query: 543 SIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPANAR 722
S++FF+ TAQKL EE+GT+ALAAALAHLSGFSQPPSSRSL+SH QGW TLQL RDP +R
Sbjct: 534 SVEFFTPTAQKLIEEQGTNALAAALAHLSGFSQPPSSRSLISHAQGWATLQLTRDPTYSR 593
Query: 723 GFLSARSVAGFLSDVYRPAADRVGKIFMIADERVQGAVFDLPEDIAKELLENEVPEGNSI 902
GFLSARSV GFLSDVY AAD VGKI +IADERVQGAVFDLPE+IAKELL ++P GN+I
Sbjct: 594 GFLSARSVTGFLSDVYPAAADEVGKIHVIADERVQGAVFDLPEEIAKELLNKQIPPGNTI 653
Query: 903 SLITKLPALQDDGPSSDNYGRFSSRDRMPRGG-GGSRGSRFCGRGGGSSRGRDSWGGDDD 1079
+ ITKLPALQDDGP D YGRFSSRDR RGG G RG RG GS GRDS G
Sbjct: 654 AKITKLPALQDDGPPGDFYGRFSSRDRPARGGPRGQRGGFRSSRGRGS--GRDSDDGGTY 711
Query: 1080 RRSRSSGGGGSSWSRGGGGGSRGSFDDWLIGGGSDRRSSSR 1202
RR S +SWS+ SR S DDWLIGG R SR
Sbjct: 712 RRGGRSNSNENSWSQ----MSRSSGDDWLIGGRRSSRPPSR 748
>gi|224124506|ref|XP_002330040.1| predicted protein [Populus trichocarpa]
Length = 735
Score = 574 bits (1478), Expect = 2e-161
Identities = 297/400 (74%), Positives = 332/400 (83%), Gaps = 5/400 (1%)
Frame = +3
Query: 3 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDAGEVSLSLSNSIASEALHG 182
EGIKLYAIS T+TSKRTILSDL+TVYAKG KTI+FT+TKRDA EVS++L+ SIASEALHG
Sbjct: 317 EGIKLYAISTTATSKRTILSDLVTVYAKGEKTIIFTRTKRDADEVSMALTQSIASEALHG 376
Query: 183 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 362
DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDL+IHYELPNDPETFVHRSGRTG
Sbjct: 377 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRTG 436
Query: 363 RAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADHVVATLNGVHPE 542
RAGKEG+AILM ++SQ+RTVRSLERD GC+FEF+SPP + +LLE+S + VVATLNGVHPE
Sbjct: 437 RAGKEGTAILMFTNSQRRTVRSLERDAGCKFEFVSPPAIEELLESSTEQVVATLNGVHPE 496
Query: 543 SIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPANAR 722
S++FF+ TAQKL EE+GT ALAAALAHLSGFS+PPSSRSL+SHEQGW TLQL RDP +R
Sbjct: 497 SVEFFTPTAQKLIEEQGTSALAAALAHLSGFSRPPSSRSLISHEQGWTTLQLTRDPTYSR 556
Query: 723 GFLSARSVAGFLSDVYRPAADRVGKIFMIADERVQGAVFDLPEDIAKELLENEVPEGNSI 902
GFLSARSV GFLSDVY AAD +GKI +IADERVQGAVFDLPE+IAKELL ++P GN+I
Sbjct: 557 GFLSARSVTGFLSDVYPAAADEIGKIHLIADERVQGAVFDLPEEIAKELLNKQLPPGNTI 616
Query: 903 SLITKLPALQDDGPSSDNYGRFSSRDRMPRGGGGSRGSRFCGRGGGSSRGRDSWGGDDDR 1082
ITKLPALQDDGP SD YGRFSSRDR R GG RG R G SSRG+ S DD
Sbjct: 617 EKITKLPALQDDGPPSDFYGRFSSRDRPAR--GGPRGQR---GGFRSSRGQGSGRYSDDE 671
Query: 1083 RSRSSGGGGSSWSRGGGGGSRGSFDDWLIGGGSDRRSSSR 1202
+ GG +S SR S DDWL+GG R SSR
Sbjct: 672 GTNRRGGRSNSNENTRSWMSRSSGDDWLVGGRRSSRPSSR 711
>gi|47827092|dbj|BAD21122.1| ATP-dependent RNA helicase [Hordeum vulgare subsp.
vulgare]
Length = 764
Score = 539 bits (1388), Expect = 6e-151
Identities = 290/431 (67%), Positives = 335/431 (77%), Gaps = 28/431 (6%)
Frame = +3
Query: 3 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDAGEVSLSLSNSIASEALHG 182
EGIKL+AI T+TSKRTILSDLITVYAKGGKTIVFT+TKRDA EVSL+L+ SIASEALHG
Sbjct: 310 EGIKLFAIPLTTTSKRTILSDLITVYAKGGKTIVFTRTKRDADEVSLALTTSIASEALHG 369
Query: 183 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 362
DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDL+IHYELPNDPETFVHRSGRTG
Sbjct: 370 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLIIHYELPNDPETFVHRSGRTG 429
Query: 363 RAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADHVVATLNGVHPE 542
RAGK G+AILM +++Q+RTV+SLERDVGC+FEFI PPT+ ++L++SA+HV+ATL GVHPE
Sbjct: 430 RAGKAGNAILMFTTNQRRTVKSLERDVGCKFEFIGPPTMEEVLDSSAEHVIATLRGVHPE 489
Query: 543 SIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPANAR 722
SI++F A++L +E G ALA+ALAHLSGFSQPPSSRSL+SHEQG VTLQL RDP AR
Sbjct: 490 SIQYFVPAAERLSQELGPTALASALAHLSGFSQPPSSRSLISHEQGSVTLQLTRDPEYAR 549
Query: 723 GFLSARSVAGFLSDVYRPAADRVGKIFMIADERVQGAVFDLPEDIAKELLENEVPEGNSI 902
GF S RSV GFLSDV AAD VGKI++IADERVQGAVFDLPE+IAK+LL E+P GN++
Sbjct: 550 GFFSPRSVTGFLSDVSPSAADAVGKIYLIADERVQGAVFDLPEEIAKDLLTMELPPGNTL 609
Query: 903 SLITKLPALQDDGPSSDNYGRFSSRDRMPRGGGGSRGSRFCGRG--GGSSRGRDSWGGDD 1076
S +TKLP LQDDGP++D+YGRFS+ DR GSR R RG GG SRGR W D+
Sbjct: 610 SKVTKLPVLQDDGPATDSYGRFSNSDR------GSRNRRGSSRGGMGGGSRGRGGWDSDE 663
Query: 1077 DRRSRSSGGGGSS------WSRGGGGGSRGSFDDWLIGGGSDRRSSSRAPFRERSFGGAC 1238
R GG SS WS DD GGG+ R + S +P RS G
Sbjct: 664 GFR---RGGRSSSRPDNDIWS-----------DDDFSGGGARRSNRSSSPSGGRSSYGGR 709
Query: 1239 FNCGSSGHRAA 1271
S G R++
Sbjct: 710 GGSSSFGDRSS 720
>gi|212274773|ref|NP_001130659.1| hypothetical protein LOC100191761 [Zea mays]
Length = 598
Score = 539 bits (1387), Expect = 7e-151
Identities = 289/428 (67%), Positives = 331/428 (77%), Gaps = 18/428 (4%)
Frame = +3
Query: 3 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDAGEVSLSLSNSIASEALHG 182
EGIKLYAI T+TSKRT+LSDLITVYAKGGKTIVFT+TK+DA EVSL+L+NSIASEALHG
Sbjct: 162 EGIKLYAIPLTTTSKRTVLSDLITVYAKGGKTIVFTRTKKDADEVSLALTNSIASEALHG 221
Query: 183 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 362
DISQHQRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRTG
Sbjct: 222 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 281
Query: 363 RAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADHVVATLNGVHPE 542
RAGK G+AILM +SSQKRTV+SLERDVGC FEFISPP++ ++LE+SA+HV+ATL GVHPE
Sbjct: 282 RAGKAGTAILMFTSSQKRTVKSLERDVGCNFEFISPPSIEEVLESSAEHVIATLRGVHPE 341
Query: 543 SIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPANAR 722
S K+F A+KL EE G ALA+ALAHLSGFSQPPSSRSL+SHEQGWVTLQL R+ R
Sbjct: 342 STKYFLGAAEKLTEELGPHALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTREQGFGR 401
Query: 723 GFLSARSVAGFLSDVYRPAADRVGKIFMIADERVQGAVFDLPEDIAKELLENEVPEGNSI 902
GF S RSV GFLSDV AAD VGKI++ ADE VQGAVFDLPE+IAK+LL E+P GN++
Sbjct: 402 GFFSPRSVTGFLSDVCSAAADEVGKIYLTADENVQGAVFDLPEEIAKDLLTMELPPGNTL 461
Query: 903 SLITKLPALQDDGPSSDNYGRFSS-----RDRMPRGGGGSRGSRFCGRGGGSSRGRDSW- 1064
+ I+KLPALQDDGP++D+YGRFS+ +R RGGG SR GRGG + G D +
Sbjct: 462 TKISKLPALQDDGPATDSYGRFSNDRGSRNNRRSRGGGASR-----GRGGWDTDGEDRFR 516
Query: 1065 GGDDDRRSRSSGGGGSSWSRGGGGGSRGSFDDWLIGGGSDRRSSSRAPF---RERSFGGA 1235
G RS + WS GG +R S G S SS +P R SFGG
Sbjct: 517 RGGRSLRSDNDSWSDDDWSGGGRKSNRSS----SFGSRSSSYSSRGSPSFGGRSSSFGGR 572
Query: 1236 CFNCGSSG 1259
N SG
Sbjct: 573 ESNRSFSG 580
>gi|195612018|gb|ACG27839.1| nucleolar RNA helicase 2 [Zea mays]
Length = 744
Score = 538 bits (1385), Expect = 1e-150
Identities = 286/423 (67%), Positives = 329/423 (77%), Gaps = 18/423 (4%)
Frame = +3
Query: 3 EGIKLYAISATSTSKRTILSDLITVYAKGGKTIVFTQTKRDAGEVSLSLSNSIASEALHG 182
EGIKLYAI T+TSKRT+LSDLITVYAKGGKTIVFT+TK+DA EVSL+L+NSIASEALHG
Sbjct: 307 EGIKLYAIPLTATSKRTVLSDLITVYAKGGKTIVFTRTKKDADEVSLALTNSIASEALHG 366
Query: 183 DISQHQRERTLNGFRQGKFTVLVATDVASRGLDIPNVDLVIHYELPNDPETFVHRSGRTG 362
DISQHQRERTLNGFRQGKFTVLVATDVA+RGLDIPNVDL+IHYELPNDPETFVHRSGRTG
Sbjct: 367 DISQHQRERTLNGFRQGKFTVLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTG 426
Query: 363 RAGKEGSAILMHSSSQKRTVRSLERDVGCRFEFISPPTVGDLLEASADHVVATLNGVHPE 542
RAGK G+AILM +SSQKRTV+SLERDVGC FEFISPP++ ++LE+SA+HV+ATL GVHPE
Sbjct: 427 RAGKAGTAILMFTSSQKRTVKSLERDVGCNFEFISPPSIEEVLESSAEHVIATLRGVHPE 486
Query: 543 SIKFFSATAQKLFEEKGTDALAAALAHLSGFSQPPSSRSLLSHEQGWVTLQLIRDPANAR 722
S K+F A+KL EE G ALA+ALAHLSGFSQPPSSRSL+SHEQGWVTLQL R+ R
Sbjct: 487 STKYFLGAAEKLTEELGPHALASALAHLSGFSQPPSSRSLISHEQGWVTLQLTREQGFGR 546
Query: 723 GFLSARSVAGFLSDVYRPAADRVGKIFMIADERVQGAVFDLPEDIAKELLENEVPEGNSI 902
GF S RSV GFLSDV AAD VGKI++ ADE VQGAVFDLPE+IAK+LL E+P GN++
Sbjct: 547 GFFSPRSVTGFLSDVCSAAADEVGKIYLTADENVQGAVFDLPEEIAKDLLTMELPPGNTL 606
Query: 903 SLITKLPALQDDGPSSDNYGRFSS-----RDRMPRGGGGSRGSRFCGRGGGSSRGRDSW- 1064
+ I+KLPALQDDGP++D+YGRFS+ +R RGGG SR GRGG + G D +
Sbjct: 607 TKISKLPALQDDGPATDSYGRFSNDRGSRNNRRSRGGGASR-----GRGGWDTDGEDRFR 661
Query: 1065 GGDDDRRSRSSGGGGSSWSRGGGGGSRGSFDDWLIGGGSDRRSSSRAPFRERSFGGACFN 1244
G RS + WS GG +R S R SSS + SFGG +
Sbjct: 662 RGGRSLRSDNDSWSDDDWSGGGRKSNRSS-------SFGSRSSSSYSSRGSPSFGGRSSS 714
Query: 1245 CGS 1253
GS
Sbjct: 715 FGS 717
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,774,473,030,928
Number of Sequences: 15229318
Number of Extensions: 1774473030928
Number of Successful Extensions: 444405353
Number of sequences better than 0.0: 0
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