BLASTX 7.6.2
Query= UN14971 /QuerySize=1620
(1619 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G61320.1 | Symbols: | unknown protein | chr3:... 287 2e-077
TAIR9_protein||AT2G45870.1 | Symbols: | unknown protein | chr2:... 249 5e-066
TAIR9_protein||AT3G61360.1 | Symbols: | pentatricopeptide (PPR)... 203 4e-052
TAIR9_protein||AT1G62910.1 | Symbols: | pentatricopeptide (PPR)... 59 8e-009
TAIR9_protein||AT1G52640.1 | Symbols: | pentatricopeptide (PPR)... 55 1e-007
TAIR9_protein||AT4G11690.1 | Symbols: | pentatricopeptide (PPR)... 53 6e-007
TAIR9_protein||AT1G12700.1 | Symbols: | helicase domain-contain... 52 1e-006
TAIR9_protein||AT1G19290.1 | Symbols: | LOCATED IN: mitochondri... 52 1e-006
TAIR9_protein||AT1G63330.1 | Symbols: | pentatricopeptide (PPR)... 51 2e-006
TAIR9_protein||AT1G62590.1 | Symbols: | pentatricopeptide (PPR)... 51 2e-006
TAIR9_protein||AT1G63150.1 | Symbols: | pentatricopeptide (PPR)... 49 8e-006
TAIR9_protein||AT1G62930.1 | Symbols: | INVOLVED IN: biological... 49 8e-006
>TAIR9_protein||AT3G61320.1 | Symbols: | unknown protein |
chr3:22694002-22695474 FORWARD
Length = 411
Score = 287 bits (733), Expect = 2e-077
Identities = 145/171 (84%), Positives = 158/171 (92%), Gaps = 1/171 (0%)
Frame = -2
Query: 1618 GIFPILRSSSLPYQLTAPALALLLVFRTEASYSRYEEGRKAWVGIIAGTDDLARQVICSV 1439
GIFPILRSSSLPYQLTAPALALLLVFRTEASYSRYEEGRKAWVGIIAGT+DLARQVICSV
Sbjct: 143 GIFPILRSSSLPYQLTAPALALLLVFRTEASYSRYEEGRKAWVGIIAGTNDLARQVICSV 202
Query: 1438 DGSGDELVIKNLLLRYVAAFPVALKCHVTYGSDVARDLQSLVEADDLSLILESKHRPRCV 1259
D SGDEL+IK+LLLRY+AAFPVALKCHV YGSD+ARDL++L+EADDLSLIL++KHRPRCV
Sbjct: 203 DSSGDELIIKDLLLRYIAAFPVALKCHVIYGSDIARDLRNLIEADDLSLILQAKHRPRCV 262
Query: 1258 IEFISQSL-AA*TGGYKERSVESKMLHLHEGIGVCEQLMGIPIPLAYTRLT 1109
IEFISQS+ K +ESKMLHLHEGIGVCEQLMGIPIPL+YTRLT
Sbjct: 263 IEFISQSIQLLKLDDAKRDLLESKMLHLHEGIGVCEQLMGIPIPLSYTRLT 313
Score = 200 bits (507), Expect = 3e-051
Identities = 104/141 (73%), Positives = 112/141 (79%), Gaps = 2/141 (1%)
Frame = -3
Query: 1233 LLKLEDTKRDLWNQRCYTYTKAL-VCVNS*WAYLFLSLTHA*PPRFLVFWHLTLPIILWD 1057
LLKL+D KRDL + + + VC + LS T RFLVFWHLTLPIILWD
Sbjct: 272 LLKLDDAKRDLLESKMLHLHEGIGVCEQLMGIPIPLSYTRL-TSRFLVFWHLTLPIILWD 330
Query: 1056 ECHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCDLVHSNIQEAVKSETIIRNR 877
ECHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCDLVHSNIQEAVKSE +IRNR
Sbjct: 331 ECHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCDLVHSNIQEAVKSEKVIRNR 390
Query: 876 IVEKIKLHEFKHSPNGRYRS* 814
I+ KIKLHEFKHS NGR+RS*
Sbjct: 391 IIAKIKLHEFKHSSNGRHRS* 411
>TAIR9_protein||AT2G45870.1 | Symbols: | unknown protein |
chr2:18875928-18877440 FORWARD
Length = 411
Score = 249 bits (634), Expect = 5e-066
Identities = 125/169 (73%), Positives = 146/169 (86%), Gaps = 1/169 (0%)
Frame = -2
Query: 1612 FPILRSSSLPYQLTAPALALLLVFRTEASYSRYEEGRKAWVGIIAGTDDLARQVICSVDG 1433
FP+LR+S LPYQLTAPALALLLVFRTEASYSR+E+GRKAWV II+GT+DLAR VI SV G
Sbjct: 145 FPVLRASPLPYQLTAPALALLLVFRTEASYSRFEQGRKAWVKIISGTNDLARLVISSVHG 204
Query: 1432 SGDELVIKNLLLRYVAAFPVALKCHVTYGSDVARDLQSLVEADDLSLILESKHRPRCVIE 1253
SGDEL+I++ LLRY+ AFPVALKCHV YGSD+A DL++++E DDLSLIL+SKHRPRCVI+
Sbjct: 205 SGDELIIRDALLRYIVAFPVALKCHVIYGSDIASDLKNVIEVDDLSLILQSKHRPRCVIQ 264
Query: 1252 FISQSLAA*T-GGYKERSVESKMLHLHEGIGVCEQLMGIPIPLAYTRLT 1109
FISQSL K +E+KM+ L EGIGVCEQLMGIPIPL+YTRLT
Sbjct: 265 FISQSLQLLNLDSTKIDMLETKMMQLQEGIGVCEQLMGIPIPLSYTRLT 313
Score = 154 bits (387), Expect = 2e-037
Identities = 82/141 (58%), Positives = 99/141 (70%), Gaps = 2/141 (1%)
Frame = -3
Query: 1233 LLKLEDTKRDLWNQRCYTYTKAL-VCVNS*WAYLFLSLTHA*PPRFLVFWHLTLPIILWD 1057
LL L+ TK D+ + + + VC + LS T RFLV WHLTLP+ILWD
Sbjct: 272 LLNLDSTKIDMLETKMMQLQEGIGVCEQLMGIPIPLSYTRL-TSRFLVLWHLTLPVILWD 330
Query: 1056 ECHWIVVPATFISAASLFCIEEVGVLIEEPFPMLALDELCDLVHSNIQEAVKSETIIRNR 877
+CHW VVPATFISAASLFCIEEVGVLIEEPF MLALDELC +V SN EAV+S+ +IRNR
Sbjct: 331 DCHWNVVPATFISAASLFCIEEVGVLIEEPFSMLALDELCAMVLSNSDEAVESKEVIRNR 390
Query: 876 IVEKIKLHEFKHSPNGRYRS* 814
I+ K ++ E KHS NG ++S*
Sbjct: 391 IIAKKRILEIKHSSNGWHKS* 411
>TAIR9_protein||AT3G61360.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr3:22704630-22706126 REVERSE
Length = 499
Score = 203 bits (514), Expect = 4e-052
Identities = 100/136 (73%), Positives = 110/136 (80%)
Frame = +1
Query: 253 KSLGSTVCVSFTRR*REGLWFRKHRPLVLLMKLFCQNGEVNLGLDLWKYMLEKGYCPHGH 432
K G + ++ +E K +V+LMKLFC NGEVNLGLDLWKYMLEKGYCPHGH
Sbjct: 364 KEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFCHNGEVNLGLDLWKYMLEKGYCPHGH 423
Query: 433 ALELLTTALCARRRANDAFECSRQTVERGRCVSEPVFRMLETSLSSKGELEKLEELKRKI 612
ALELLTTALCARRRANDAFECS QTVERGRCVSEPV+RMLETSLSS EL+KLEELK +I
Sbjct: 424 ALELLTTALCARRRANDAFECSWQTVERGRCVSEPVYRMLETSLSSNNELKKLEELKEEI 483
Query: 613 QKLHSFLPPPGTQLI* 660
QKLHSFLPPP QL+*
Sbjct: 484 QKLHSFLPPPEIQLM* 499
Score = 191 bits (483), Expect = 2e-048
Identities = 90/110 (81%), Positives = 102/110 (92%)
Frame = +3
Query: 3 QIVTTLIHGAGVVRNKVKARQLFDEIPERGLKCDCGAYNALMSALMRCGDVSGAVQVMKE 182
QI+TTLIHG+GV RNK+KARQLFDEI +RGL DCGAYNALMS+LM+CGDVSGA++VMKE
Sbjct: 281 QILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVMKE 340
Query: 183 MEENGVEADSVTFHSVFIGMMKSKEFGFDGVCELYQKMKGRSLVPKTPTV 332
MEE G+E DSVTFHS+FIGMMKSKEFGF+GVCE YQKMK RSLVPKTPT+
Sbjct: 341 MEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTI 390
>TAIR9_protein||AT1G62910.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23299060-23303162 FORWARD
Length = 1134
Score = 59 bits (141), Expect = 8e-009
Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 2/102 (1%)
Frame = +3
Query: 12 TTLIHGAGVVRNKVKARQLFDEIPERGLKCDCGAYNALMSALMRCGDVSGAVQVMKEMEE 191
TTLIHG + +A L D++ +RG + D Y +++ L + GD+ A+ ++K+ME+
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEK 251
Query: 192 NGVEADSVTFHSVFIGMMKSKEFGFDGVCELYQKMKGRSLVP 317
+EAD V ++++ G+ K K D L+ +M + + P
Sbjct: 252 GKIEADVVIYNTIIDGLCKYKH--MDDALNLFTEMDNKGIRP 291
Score = 50 bits (117), Expect = 5e-006
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Frame = +3
Query: 12 TTLIHGAGVVRNKVKARQLFDEIPERGLKCDCGAYNALMSALMRCGDVSGAVQVMKEMEE 191
TTLIHG + +A L D + +RG + D Y A+++ L + GD A+ ++ +ME
Sbjct: 792 TTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEA 851
Query: 192 NGVEADSVTFHSVFIGMMKSKEFGFDGVCELYQKMKGRSLVPKTPT 329
+EA+ V + +V + K + D L+ +M+ + + P T
Sbjct: 852 AKIEANVVIYSTVIDSLCKYRH--EDDALNLFTEMENKGVRPNVIT 895
>TAIR9_protein||AT1G52640.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:19608857-19610428 REVERSE
Length = 524
Score = 55 bits (130), Expect = 1e-007
Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Frame = +3
Query: 18 LIHGAGVVRNKVKARQLFDEIPERGLKCDCGAYNALMSALMRCGDVSGAVQVMKEMEENG 197
L+ G +R+ AR++FDE+ ER D AYNAL+ AL + GDV G ++ +EM G
Sbjct: 214 LVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLG 273
Query: 198 VEADSVTFHSVFI 236
++ D+ +F ++FI
Sbjct: 274 LKPDAYSF-AIFI 285
>TAIR9_protein||AT4G11690.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:7056254-7057954 FORWARD
Length = 567
Score = 53 bits (125), Expect = 6e-007
Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Frame = +3
Query: 15 TLIHGAGVVRNKVKARQLFDEIPERGLKCDCGAYNALMSALMRCGDVSGAVQVMKEMEEN 194
TLI G V KA L ++ RGL YN L+S R GD SGA +++KEMEE
Sbjct: 343 TLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEER 402
Query: 195 GVEADSVTFHSVFIGMMKSKEFGFDGVCELYQKMKGRSLVPKTPT 329
G++ VT+ + +S + +L M+ LVP T
Sbjct: 403 GIKPSKVTYTILIDTFARSD--NMEKAIQLRLSMEELGLVPDVHT 445
>TAIR9_protein||AT1G12700.1 | Symbols: | helicase domain-containing protein /
pentatricopeptide (PPR) repeat-containing protein |
chr1:4322913-4326197 REVERSE
Length = 829
Score = 52 bits (122), Expect = 1e-006
Identities = 29/91 (31%), Positives = 51/91 (56%), Gaps = 2/91 (2%)
Frame = +3
Query: 57 ARQLFDEIPERGLKCDCGAYNALMSALMRCGDVSGAVQVMKEMEENGVEADSVTFHSVFI 236
A L ++ ER +K D Y+ ++ +L R G + A+ + KEME G+++ VT++S+
Sbjct: 202 ALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVR 261
Query: 237 GMMKSKEFGFDGVCELYQKMKGRSLVPKTPT 329
G+ K+ ++ DG L + M R +VP T
Sbjct: 262 GLCKAGKWN-DGAL-LLKDMVSREIVPNVIT 290
>TAIR9_protein||AT1G19290.1 | Symbols: | LOCATED IN: mitochondrion; EXPRESSED
IN: 12 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS
InterPro DOMAIN/s: Pentatricopeptide repeat (InterPro:IPR002885); BEST
Arabidopsis thaliana protein match is: pentatricopeptide (PPR)
repeat-containing protein (TAIR:AT5G55840.1); Has 31003 Blast hits to
6161 proteins in 194 species: Archae - 6; Bacteria - 22; Metazoa - 935;
Fungi - 736; Plants - 27904; Viruses - 0; Other Eukaryotes - 1400
(source: NCBI BLink). | chr1:6666249-6668963 FORWARD
Length = 905
Score = 52 bits (122), Expect = 1e-006
Identities = 37/136 (27%), Positives = 68/136 (50%), Gaps = 5/136 (3%)
Frame = +3
Query: 12 TTLIHGAGVVRNKVKARQLFDEIPERGLKCDCGAYNALMSALMRCGDVSGAVQVMKEMEE 191
T LIHG + + KA L DE+ +G+ + YNAL+ L + G+V A +++ ++ +
Sbjct: 759 TILIHGCAIAGDINKAFTLRDEMALKGIIPNIVTYNALIKGLCKLGNVDRAQRLLHKLPQ 818
Query: 192 NGVEADSVTFHSVFIGMMKSKEFGFDGVCELYQKMKGRSLVPKTPTVGFAD---EAVLSE 362
G+ +++T++++ G++KS L +KM + LV + G D E VL
Sbjct: 819 KGITPNAITYNTLIDGLVKSGNVA--EAMRLKEKMIEKGLVRGSDKQGDVDIPKEVVLDP 876
Query: 363 R*S*LGTRFVEVYAGE 410
T +E+ + E
Sbjct: 877 EVKLGSTGVIEMNSNE 892
>TAIR9_protein||AT1G63330.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23489628-23491519 FORWARD
Length = 559
Score = 51 bits (121), Expect = 2e-006
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Frame = +3
Query: 12 TTLIHGAGVVRNKVKARQLFDEIPERGLKCDCGAYNALMSALMRCGDVSGAVQVMKEMEE 191
TTLIHG + +A L D + +RG + + Y +++ L + GD+ A ++ +ME
Sbjct: 118 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEA 177
Query: 192 NGVEADSVTFHSVFIGMMKSKEFGFDGVCELYQKMKGRSLVPKTPT 329
+EAD V F+++ + K + D L+++M+ + + P T
Sbjct: 178 AKIEADVVIFNTIIDSLCKYRH--VDDALNLFKEMETKGIRPNVVT 221
>TAIR9_protein||AT1G62590.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23177294-23179198 REVERSE
Length = 635
Score = 51 bits (120), Expect = 2e-006
Identities = 29/106 (27%), Positives = 55/106 (51%), Gaps = 2/106 (1%)
Frame = +3
Query: 12 TTLIHGAGVVRNKVKARQLFDEIPERGLKCDCGAYNALMSALMRCGDVSGAVQVMKEMEE 191
TTLIHG + +A L D + +RG + + Y +++ L + GD A+ ++ +ME
Sbjct: 194 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEA 253
Query: 192 NGVEADSVTFHSVFIGMMKSKEFGFDGVCELYQKMKGRSLVPKTPT 329
+EAD V F+++ + K + D L+++M+ + + P T
Sbjct: 254 AKIEADVVIFNTIIDSLCKYRH--VDDALNLFKEMETKGIRPNVVT 297
>TAIR9_protein||AT1G63150.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr1:23419399-23421288 FORWARD
Length = 630
Score = 49 bits (115), Expect = 8e-006
Identities = 27/106 (25%), Positives = 57/106 (53%), Gaps = 2/106 (1%)
Frame = +3
Query: 12 TTLIHGAGVVRNKVKARQLFDEIPERGLKCDCGAYNALMSALMRCGDVSGAVQVMKEMEE 191
TTLIHG + +A L D++ +RG + D Y +++ L + GD+ A+ ++ +ME
Sbjct: 192 TTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEA 251
Query: 192 NGVEADSVTFHSVFIGMMKSKEFGFDGVCELYQKMKGRSLVPKTPT 329
++A+ V F+++ + K + + +L+ +M+ + + P T
Sbjct: 252 ARIKANVVIFNTIIDSLCKYRH--VEVAVDLFTEMETKGIRPNVVT 295
>TAIR9_protein||AT1G62930.1 | Symbols: | INVOLVED IN: biological_process
unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 14 growth
stages; CONTAINS InterPro DOMAIN/s: Pentatricopeptide repeat
(InterPro:IPR002885); BEST Arabidopsis thaliana protein match is:
pentatricopeptide (PPR) repeat-containing protein (TAIR:AT1G63130.1);
Has 29147 Blast hits to 6292 proteins in 192 species: Archae - 8;
Bacteria - 22; Metazoa - 1258; Fungi - 858; Plants - 25291; Viruses -
0; Other Eukaryotes - 1710 (source: NCBI BLink). |
chr1:23306534-23308423 FORWARD
Length = 630
Score = 49 bits (115), Expect = 8e-006
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 2/105 (1%)
Frame = +3
Query: 15 TLIHGAGVVRNKVKARQLFDEIPERGLKCDCGAYNALMSALMRCGDVSGAVQVMKEMEEN 194
TLIHG + +A L D + RG + D Y +++ L + GD+ A+ ++K+ME+
Sbjct: 190 TLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKG 249
Query: 195 GVEADSVTFHSVFIGMMKSKEFGFDGVCELYQKMKGRSLVPKTPT 329
+EAD V + ++ + K + L+ +M + + P T
Sbjct: 250 KIEADVVIYTTIIDALCNYK--NVNDALNLFTEMDNKGIRPNVVT 292
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,828,865,732
Number of Sequences: 33410
Number of Extensions: 7828865732
Number of Successful Extensions: 264530517
Number of sequences better than 0.0: 0
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