BLASTX 7.6.2
Query= UN15163 /QuerySize=1355
(1354 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G54080.2 | Symbols: UBP1A | oligouridylate-bin... 306 3e-083
TAIR9_protein||AT1G54080.1 | Symbols: UBP1A | oligouridylate-bin... 306 3e-083
TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding ... 276 3e-074
TAIR9_protein||AT1G17370.1 | Symbols: UBP1B | UBP1B (oligouridyl... 218 1e-056
TAIR9_protein||AT1G17370.2 | Symbols: UBP1B | UBP1B (oligouridyl... 218 1e-056
>TAIR9_protein||AT1G54080.2 | Symbols: UBP1A | oligouridylate-binding protein,
putative | chr1:20183923-20186824 REVERSE
Length = 431
Score = 306 bits (782), Expect = 3e-083
Identities = 151/181 (83%), Positives = 162/181 (89%), Gaps = 5/181 (2%)
Frame = -3
Query: 890 GSSSREISISNEEAPENNPQYTTVYVGNLAPEVTQLDLHRLFHTLGAGVIEEVRVQRDKG 711
GSS +SNE+APENNPQ+TTVYVGNL+PEVTQLDLHRLF+TLGAGVIEEVRVQRDKG
Sbjct: 252 GSSEDGRELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKG 311
Query: 710 FGFVRYNTHDEAALAIQMGNSQPFLFNRQIKCSWGNKPTPIGTASNPLPPPVPVAVPGLS 531
FGFVRYNTHDEAALAIQMGN+QPFLF+RQI+CSWGNKPTP GTASNPLPPP P +VP LS
Sbjct: 312 FGFVRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSLS 371
Query: 530 PMDLLAYERQLALAKMHPQAQHSLRH----VNAAGASAAAMYDGGFQNVAAAHQQLMYYQ 363
MDLLAYERQLALAKMHPQAQHSLR VN AG + AAMYDGG+QNVAAAHQQLMYYQ
Sbjct: 372 AMDLLAYERQLALAKMHPQAQHSLRQAGLGVNVAGGT-AAMYDGGYQNVAAAHQQLMYYQ 430
Query: 362 * 360
*
Sbjct: 431 * 431
Score = 131 bits (327), Expect = 2e-030
Identities = 66/86 (76%), Positives = 71/86 (82%), Gaps = 11/86 (12%)
Frame = -1
Query: 1114 MQNPRL------KQQQQQQQAMMQQALMQQHHSLYHPSLMAPPPPPPPQMEPLPSGNLPP 953
MQN RL +QQQQ QQAM+QQA+MQQH SLYHP +MA PPQMEPLPSGNLPP
Sbjct: 1 MQNQRLIKQQQQQQQQQHQQAMIQQAMMQQHPSLYHPGVMA-----PPQMEPLPSGNLPP 55
Query: 952 GFDPTTCRSVYAGNIHTQVTEVLLQE 875
GFDPTTCRSVYAGNIHTQVTE+LLQE
Sbjct: 56 GFDPTTCRSVYAGNIHTQVTEILLQE 81
>TAIR9_protein||AT1G54080.1 | Symbols: UBP1A | oligouridylate-binding protein,
putative | chr1:20183923-20186824 REVERSE
Length = 427
Score = 306 bits (782), Expect = 3e-083
Identities = 151/181 (83%), Positives = 162/181 (89%), Gaps = 5/181 (2%)
Frame = -3
Query: 890 GSSSREISISNEEAPENNPQYTTVYVGNLAPEVTQLDLHRLFHTLGAGVIEEVRVQRDKG 711
GSS +SNE+APENNPQ+TTVYVGNL+PEVTQLDLHRLF+TLGAGVIEEVRVQRDKG
Sbjct: 248 GSSEDGRELSNEDAPENNPQFTTVYVGNLSPEVTQLDLHRLFYTLGAGVIEEVRVQRDKG 307
Query: 710 FGFVRYNTHDEAALAIQMGNSQPFLFNRQIKCSWGNKPTPIGTASNPLPPPVPVAVPGLS 531
FGFVRYNTHDEAALAIQMGN+QPFLF+RQI+CSWGNKPTP GTASNPLPPP P +VP LS
Sbjct: 308 FGFVRYNTHDEAALAIQMGNAQPFLFSRQIRCSWGNKPTPSGTASNPLPPPAPASVPSLS 367
Query: 530 PMDLLAYERQLALAKMHPQAQHSLRH----VNAAGASAAAMYDGGFQNVAAAHQQLMYYQ 363
MDLLAYERQLALAKMHPQAQHSLR VN AG + AAMYDGG+QNVAAAHQQLMYYQ
Sbjct: 368 AMDLLAYERQLALAKMHPQAQHSLRQAGLGVNVAGGT-AAMYDGGYQNVAAAHQQLMYYQ 426
Query: 362 * 360
*
Sbjct: 427 * 427
Score = 131 bits (327), Expect = 2e-030
Identities = 66/86 (76%), Positives = 71/86 (82%), Gaps = 11/86 (12%)
Frame = -1
Query: 1114 MQNPRL------KQQQQQQQAMMQQALMQQHHSLYHPSLMAPPPPPPPQMEPLPSGNLPP 953
MQN RL +QQQQ QQAM+QQA+MQQH SLYHP +MA PPQMEPLPSGNLPP
Sbjct: 1 MQNQRLIKQQQQQQQQQHQQAMIQQAMMQQHPSLYHPGVMA-----PPQMEPLPSGNLPP 55
Query: 952 GFDPTTCRSVYAGNIHTQVTEVLLQE 875
GFDPTTCRSVYAGNIHTQVTE+LLQE
Sbjct: 56 GFDPTTCRSVYAGNIHTQVTEILLQE 81
>TAIR9_protein||AT3G14100.1 | Symbols: | oligouridylate-binding protein,
putative | chr3:4673027-4675950 FORWARD
Length = 428
Score = 276 bits (705), Expect = 3e-074
Identities = 145/187 (77%), Positives = 151/187 (80%), Gaps = 12/187 (6%)
Frame = -3
Query: 890 GSSSREISISNEEAPENNPQYTTVYVGNLAPEVTQLDLHRLFHTLGAGVIEEVRVQRDKG 711
GSS NEE PENN Q+TTVYVGNLAPEVTQLDLHR FH LGAGVIEEVRVQRDKG
Sbjct: 244 GSSEDGKETLNEETPENNSQFTTVYVGNLAPEVTQLDLHRYFHALGAGVIEEVRVQRDKG 303
Query: 710 FGFVRYNTHDEAALAIQMGNSQPFLFNRQIKCSWGNKPTPIGTASNPLPPPVPVAVPGLS 531
FGFVRYNTH EAALAIQMGN+QP+LFNRQIKCSWGNKPTP GTASNPLPPP P VPGLS
Sbjct: 304 FGFVRYNTHPEAALAIQMGNTQPYLFNRQIKCSWGNKPTPPGTASNPLPPPAPAPVPGLS 363
Query: 530 PMDLLAYERQLALAK-------MHPQAQHSLRH---VNAAGASAAAMYDGGFQNVAAAHQ 381
DLL YERQLAL+K MH Q QH LR +NAAGA+ AAMYDGGFQNVAAA Q
Sbjct: 364 AADLLNYERQLALSKMASVNALMHQQGQHPLRQAHGINAAGAT-AAMYDGGFQNVAAA-Q 421
Query: 380 QLMYYQ* 360
QLMYYQ*
Sbjct: 422 QLMYYQ* 428
Score = 126 bits (316), Expect = 3e-029
Identities = 62/82 (75%), Positives = 68/82 (82%), Gaps = 7/82 (8%)
Frame = -1
Query: 1114 MQNPRLK--QQQQQQQAMMQQALMQQHHSLYHPSLMAPPPPPPPQMEPLPSGNLPPGFDP 941
MQNPRLK QQQQQQQAMMQQ + Q HSLYHP ++A PPQ+EP+PSGNLPPGFDP
Sbjct: 1 MQNPRLKQHQQQQQQQAMMQQQALMQQHSLYHPGVLA-----PPQLEPVPSGNLPPGFDP 55
Query: 940 TTCRSVYAGNIHTQVTEVLLQE 875
+TCRSVY GNIHTQVTE LLQE
Sbjct: 56 STCRSVYVGNIHTQVTEPLLQE 77
>TAIR9_protein||AT1G17370.1 | Symbols: UBP1B | UBP1B (oligouridylate binding
protein 1B); mRNA 3'-UTR binding | chr1:5951842-5954825 REVERSE
Length = 420
Score = 218 bits (553), Expect = 1e-056
Identities = 111/173 (64%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
Frame = -3
Query: 863 SNEEAPENNPQYTTVYVGNLAPEVTQLDLHRLFHTLGAGVIEEVRVQRDKGFGFVRYNTH 684
+N EAPENN QYTTVYVGNLAPEV+Q+DLHR FH+LGAGVIEEVRVQRDKGFGFVRY+TH
Sbjct: 248 TNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTH 307
Query: 683 DEAALAIQMGNSQPFLFNRQIKCSWGNKPTPIGTASNPLPPPVPVAVPGLSPMDLLAYER 504
EAALAIQMGN+ +L RQ+KCSWG+KPTP GTASNPLPPP P +PG S DLLAYER
Sbjct: 308 VEAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYER 367
Query: 503 QLALAK---MHPQAQH--SLRHVNAAGASAAAMYDGGFQNVAAAHQQLMYYQ* 360
QLA++K M+P H A A + QQLMYYQ*
Sbjct: 368 QLAMSKMAGMNPMMHHPQGQHAFKQAAMGATGSNQAIYDGGYQNAQQLMYYQ* 420
Score = 119 bits (297), Expect = 5e-027
Identities = 60/76 (78%), Positives = 64/76 (84%), Gaps = 6/76 (7%)
Frame = -1
Query: 1102 RLKQQQQQQQAMMQQALMQQHHSLYHPSLMAPPPPPPPQMEPLPSGNLPPGFDPTTCRSV 923
RLKQQQQQQQ MMQQALMQQ SLYHP L+A PPQ+EP+PSGNLPPGFDP+TCRSV
Sbjct: 3 RLKQQQQQQQVMMQQALMQQ-QSLYHPGLLA-----PPQIEPIPSGNLPPGFDPSTCRSV 56
Query: 922 YAGNIHTQVTEVLLQE 875
Y GNIH QVTE LLQE
Sbjct: 57 YVGNIHIQVTEPLLQE 72
>TAIR9_protein||AT1G17370.2 | Symbols: UBP1B | UBP1B (oligouridylate binding
protein 1B); mRNA 3'-UTR binding | chr1:5951842-5954825 REVERSE
Length = 417
Score = 218 bits (553), Expect = 1e-056
Identities = 111/173 (64%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
Frame = -3
Query: 863 SNEEAPENNPQYTTVYVGNLAPEVTQLDLHRLFHTLGAGVIEEVRVQRDKGFGFVRYNTH 684
+N EAPENN QYTTVYVGNLAPEV+Q+DLHR FH+LGAGVIEEVRVQRDKGFGFVRY+TH
Sbjct: 245 TNGEAPENNAQYTTVYVGNLAPEVSQVDLHRHFHSLGAGVIEEVRVQRDKGFGFVRYSTH 304
Query: 683 DEAALAIQMGNSQPFLFNRQIKCSWGNKPTPIGTASNPLPPPVPVAVPGLSPMDLLAYER 504
EAALAIQMGN+ +L RQ+KCSWG+KPTP GTASNPLPPP P +PG S DLLAYER
Sbjct: 305 VEAALAIQMGNTHSYLSGRQMKCSWGSKPTPAGTASNPLPPPAPAPIPGFSASDLLAYER 364
Query: 503 QLALAK---MHPQAQH--SLRHVNAAGASAAAMYDGGFQNVAAAHQQLMYYQ* 360
QLA++K M+P H A A + QQLMYYQ*
Sbjct: 365 QLAMSKMAGMNPMMHHPQGQHAFKQAAMGATGSNQAIYDGGYQNAQQLMYYQ* 417
Score = 119 bits (297), Expect = 5e-027
Identities = 60/76 (78%), Positives = 64/76 (84%), Gaps = 6/76 (7%)
Frame = -1
Query: 1102 RLKQQQQQQQAMMQQALMQQHHSLYHPSLMAPPPPPPPQMEPLPSGNLPPGFDPTTCRSV 923
RLKQQQQQQQ MMQQALMQQ SLYHP L+A PPQ+EP+PSGNLPPGFDP+TCRSV
Sbjct: 3 RLKQQQQQQQVMMQQALMQQ-QSLYHPGLLA-----PPQIEPIPSGNLPPGFDPSTCRSV 56
Query: 922 YAGNIHTQVTEVLLQE 875
Y GNIH QVTE LLQE
Sbjct: 57 YVGNIHIQVTEPLLQE 72
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,918,598,619
Number of Sequences: 33410
Number of Extensions: 7918598619
Number of Successful Extensions: 269723333
Number of sequences better than 0.0: 0
|
