BLASTX 7.6.2
Query= UN15222 /QuerySize=1687
(1686 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q6ICX4|PTBP3_ARATH Polypyrimidine tract-binding protein homol... 417 1e-115
sp|P26599|PTBP1_HUMAN Polypyrimidine tract-binding protein 1 OS=... 132 7e-030
sp|Q8WN55|PTBP1_BOVIN Polypyrimidine tract-binding protein 1 OS=... 129 1e-028
sp|Q29099|PTBP1_PIG Polypyrimidine tract-binding protein 1 OS=Su... 128 2e-028
sp|Q00438|PTBP1_RAT Polypyrimidine tract-binding protein 1 OS=Ra... 128 2e-028
sp|Q9UKA9|PTBP2_HUMAN Polypyrimidine tract-binding protein 2 OS=... 124 2e-027
sp|Q91Z31|PTBP2_MOUSE Polypyrimidine tract-binding protein 2 OS=... 124 2e-027
sp|Q66H20|PTBP2_RAT Polypyrimidine tract-binding protein 2 OS=Ra... 124 2e-027
sp|Q8BHD7|ROD1_MOUSE Regulator of differentiation 1 OS=Mus muscu... 124 2e-027
sp|Q9Z118|ROD1_RAT Regulator of differentiation 1 OS=Rattus norv... 123 4e-027
sp|O95758|ROD1_HUMAN Regulator of differentiation 1 OS=Homo sapi... 123 5e-027
sp|P17225|PTBP1_MOUSE Polypyrimidine tract-binding protein 1 OS=... 119 8e-026
>sp|Q6ICX4|PTBP3_ARATH Polypyrimidine tract-binding protein homolog 3
OS=Arabidopsis thaliana GN=At1g43190 PE=2 SV=1
Length = 432
Score = 417 bits (1071), Expect = 1e-115
Identities = 204/225 (90%), Positives = 215/225 (95%), Gaps = 1/225 (0%)
Frame = +1
Query: 109 MAESSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSS-ITALQF 285
MAESSKV+HVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSS ++ALQF
Sbjct: 1 MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQF 60
Query: 286 FTTVQPTIRGRNVYIQFSSHQELTTAEQNIHGREDEPNRILLVTVHHMLYPITVDVLHQV 465
FT VQPTIRGRNVY+QFSSHQELTT EQNIHGREDEPNRILLVT+HHMLYPITVDVLHQV
Sbjct: 61 FTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHMLYPITVDVLHQV 120
Query: 466 FSPYGFVEKIVTFQKSAGFQALIQYQAQQCAASARTSLQGRNIYDGCCQLDIQFSNLEEL 645
FSPYGFVEK+VTFQKSAGFQALIQYQ QQCAASART+LQGRNIYDGCCQLDIQFSNLEEL
Sbjct: 121 FSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSNLEEL 180
Query: 646 QVNYNNDRSRDYTNPNLPSEQKGRLPHPGYGDAGVAYPQVSNAKS 780
QVNYNNDRSRDYTNPNLP+EQKGR HP YGD GVAYPQ++N +
Sbjct: 181 QVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSA 225
Score = 413 bits (1060), Expect = 3e-114
Identities = 202/213 (94%), Positives = 208/213 (97%)
Frame = +3
Query: 846 MANTSAIAAAFGGGLPPGITGTNDRCTILVSNLNTDSVDEDKLFNLFSLYGNIVRIKLLR 1025
MANTSAIAAAFGGGLPPGITGTNDRCT+LVSNLN DS+DEDKLFNLFSLYGNIVRIKLLR
Sbjct: 220 MANTSAIAAAFGGGLPPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLR 279
Query: 1026 NKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNYSKHPNITPGTDSHDYVNSNLNRF 1205
NKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVN+SKHPNITPGTDSHDYVNSNLNRF
Sbjct: 280 NKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRF 339
Query: 1206 NRNAAKNYRYCCSPTKMIHLSTFPQDVTEEEVVNHVQERGAILNTKVFEMNGKK*ALVQF 1385
NRNAAKNYRYCCSPTKMIHLST PQDVTEEEV+NHVQE GA++NTKVFEMNGKK ALVQF
Sbjct: 340 NRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQF 399
Query: 1386 ENEEEAAEALVCKHATSLGGSIIRISFFQLQTI 1484
ENEEEAAEALVCKHATSLGGSIIRISF QLQTI
Sbjct: 400 ENEEEAAEALVCKHATSLGGSIIRISFSQLQTI 432
>sp|P26599|PTBP1_HUMAN Polypyrimidine tract-binding protein 1 OS=Homo sapiens
GN=PTBP1 PE=1 SV=1
Length = 531
Score = 132 bits (332), Expect = 7e-030
Identities = 80/213 (37%), Positives = 119/213 (55%), Gaps = 9/213 (4%)
Frame = +3
Query: 852 NTSAIAAAFGGGLPPGITGTNDRCTILVSNLNTDSVDEDKLFNLFSLYGNIVRIKLLRNK 1031
+ +A AAA G PG+ G + +LVSNLN + V LF LF +YG++ R+K+L NK
Sbjct: 315 SAAAAAAAAGRIAIPGLAGAGN-SVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNK 373
Query: 1032 PDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNYSKHPNITPGTD-------SHDYVNS 1190
++ALVQM DG QA+LA+ L G L GK + + SKH N+ + + DY NS
Sbjct: 374 KENALVQMADGNQAQLAMSHLNGHKLHGKPIRITLSKHQNVQLPREGQEDQGLTKDYGNS 433
Query: 1191 NLNRFNRNAAKNYRYCCSPTKMIHLSTFPQDVTEEEVVNHVQERGAILNTKVFEMNGKK* 1370
L+RF + +KN++ P+ +HLS P V+EE++ G ++ F +K
Sbjct: 434 PLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEEDLKVLFSSNGGVVKGFKFFQKDRKM 493
Query: 1371 ALVQFENEEEAAEALVCKHATSLG-GSIIRISF 1466
AL+Q + EEA +AL+ H LG +R+SF
Sbjct: 494 ALIQMGSVEEAVQALIDLHNHDLGENHHLRVSF 526
Score = 119 bits (297), Expect = 8e-026
Identities = 60/125 (48%), Positives = 80/125 (64%), Gaps = 1/125 (0%)
Frame = +1
Query: 403 ILLVTVHHMLYPITVDVLHQVFSPYGFVEKIVTFQKSAGFQALIQYQAQQCAASARTSLQ 582
+L + V ++ YP+T+DVLHQ+FS +G V KI+TF K+ FQAL+QY A A+ SL
Sbjct: 183 VLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLD 242
Query: 583 GRNIYDGCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLPS-EQKGRLPHPGYGDAGVAYP 759
G+NIY+ CC L I FS L L V YNND+SRDYT P+LPS + + L G++ P
Sbjct: 243 GQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVP 302
Query: 760 QVSNA 774
V A
Sbjct: 303 NVHGA 307
>sp|Q8WN55|PTBP1_BOVIN Polypyrimidine tract-binding protein 1 OS=Bos taurus
GN=PTBP1 PE=2 SV=1
Length = 531
Score = 129 bits (322), Expect = 1e-028
Identities = 78/213 (36%), Positives = 119/213 (55%), Gaps = 9/213 (4%)
Frame = +3
Query: 852 NTSAIAAAFGGGLPPGITGTNDRCTILVSNLNTDSVDEDKLFNLFSLYGNIVRIKLLRNK 1031
+ +A AAA G PG+ G + +LVSNLN + V LF LF +YG++ R+K+L NK
Sbjct: 315 SAAAAAAAAGRIAIPGLAGAGN-SVLLVSNLNPERVTPQSLFILFGVYGDVQRVKVLFNK 373
Query: 1032 PDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNYSKHPNITPGTD-------SHDYVNS 1190
++ALVQM DG QA+LA+ L G L GK + + SKH ++ + + DY NS
Sbjct: 374 KENALVQMADGSQAQLAMSHLNGHKLHGKPVRITLSKHQSVQLPREGQEDQGLTKDYGNS 433
Query: 1191 NLNRFNRNAAKNYRYCCSPTKMIHLSTFPQDVTEEEVVNHVQERGAILNTKVFEMNGKK* 1370
L+RF + +KN++ P+ +HLS P ++E+++ G I+ F +K
Sbjct: 434 PLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEDDLKILFSSNGGIVKGFKFFQKDRKM 493
Query: 1371 ALVQFENEEEAAEALVCKHATSLG-GSIIRISF 1466
AL+Q + EEA +AL+ H LG +R+SF
Sbjct: 494 ALIQMGSVEEAIQALIDLHNHDLGENHHLRVSF 526
Score = 119 bits (297), Expect = 8e-026
Identities = 60/125 (48%), Positives = 80/125 (64%), Gaps = 1/125 (0%)
Frame = +1
Query: 403 ILLVTVHHMLYPITVDVLHQVFSPYGFVEKIVTFQKSAGFQALIQYQAQQCAASARTSLQ 582
+L + V ++ YP+T+DVLHQ+FS +G V KI+TF K+ FQAL+QY A A+ SL
Sbjct: 183 VLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLD 242
Query: 583 GRNIYDGCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLPS-EQKGRLPHPGYGDAGVAYP 759
G+NIY+ CC L I FS L L V YNND+SRDYT P+LPS + + L G++ P
Sbjct: 243 GQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVP 302
Query: 760 QVSNA 774
V A
Sbjct: 303 NVHGA 307
>sp|Q29099|PTBP1_PIG Polypyrimidine tract-binding protein 1 OS=Sus scrofa
GN=PTBP1 PE=2 SV=1
Length = 557
Score = 128 bits (320), Expect = 2e-028
Identities = 79/213 (37%), Positives = 118/213 (55%), Gaps = 9/213 (4%)
Frame = +3
Query: 852 NTSAIAAAFGGGLPPGITGTNDRCTILVSNLNTDSVDEDKLFNLFSLYGNIVRIKLLRNK 1031
+ +A AAA G PG+ G + +LVSNLN + V LF LF +Y ++ R+K+L NK
Sbjct: 341 SAAARAAAAGRIAIPGLAGAGN-SVLLVSNLNPERVTPQSLFILFGVYCDVQRVKILFNK 399
Query: 1032 PDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNYSKHPNITPGTD-------SHDYVNS 1190
++ALVQM DG QA+LA+ L G L GK + + SKH N+ + + DY NS
Sbjct: 400 KENALVQMADGSQAQLAMSHLNGHKLHGKPVRITLSKHQNVQLPREGQEDQGLTKDYGNS 459
Query: 1191 NLNRFNRNAAKNYRYCCSPTKMIHLSTFPQDVTEEEVVNHVQERGAILNTKVFEMNGKK* 1370
L+RF + +KN++ P+ +HLS P ++EE++ G I+ F +K
Sbjct: 460 PLHRFKKPGSKNFQNIFPPSATLHLSNIPPSISEEDLKILFSSNGGIVKGFKFFQKDRKM 519
Query: 1371 ALVQFENEEEAAEALVCKHATSLG-GSIIRISF 1466
AL+Q + EEA +AL+ H LG +R+SF
Sbjct: 520 ALIQMGSVEEAIQALIDLHNHDLGENHHLRVSF 552
Score = 118 bits (295), Expect = 1e-025
Identities = 55/100 (55%), Positives = 71/100 (71%)
Frame = +1
Query: 403 ILLVTVHHMLYPITVDVLHQVFSPYGFVEKIVTFQKSAGFQALIQYQAQQCAASARTSLQ 582
+L + V ++ YP+T+DVLHQ+FS +G V KI+TF K+ FQAL+QY A A+ SL
Sbjct: 183 VLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLD 242
Query: 583 GRNIYDGCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLPS 702
G+NIY+ CC L I FS L L V YNND+SRDYT P+LPS
Sbjct: 243 GQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPS 282
>sp|Q00438|PTBP1_RAT Polypyrimidine tract-binding protein 1 OS=Rattus norvegicus
GN=Ptbp1 PE=1 SV=1
Length = 555
Score = 128 bits (320), Expect = 2e-028
Identities = 76/213 (35%), Positives = 120/213 (56%), Gaps = 9/213 (4%)
Frame = +3
Query: 852 NTSAIAAAFGGGLPPGITGTNDRCTILVSNLNTDSVDEDKLFNLFSLYGNIVRIKLLRNK 1031
+ +A AAA G PG+ G + +LVSNLN + V LF LF +YG++ R+K+L NK
Sbjct: 339 SAAAAAAAAGRIAIPGLAGAGN-SVLLVSNLNPERVTPQSLFILFGVYGDVQRVKILFNK 397
Query: 1032 PDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNYSKHPNITPGTD-------SHDYVNS 1190
++ALV+M DG QA+LA+ L G L GK + + SKH ++ + + DY +S
Sbjct: 398 KENALVEMADGSQAQLAMSHLNGHKLHGKSVRITLSKHQSVQLPREGQEDQGLTKDYGSS 457
Query: 1191 NLNRFNRNAAKNYRYCCSPTKMIHLSTFPQDVTEEEVVNHVQERGAILNTKVFEMNGKK* 1370
L+RF + +KN++ P+ +HLS P V+E+++ + G ++ F +K
Sbjct: 458 PLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVSEDDLKSLFSSNGGVVKGFKFFQKDRKM 517
Query: 1371 ALVQFENEEEAAEALVCKHATSLG-GSIIRISF 1466
AL+Q + EEA +AL+ H LG +R+SF
Sbjct: 518 ALIQMGSVEEAVQALIELHNHDLGENHHLRVSF 550
Score = 118 bits (295), Expect = 1e-025
Identities = 55/100 (55%), Positives = 71/100 (71%)
Frame = +1
Query: 403 ILLVTVHHMLYPITVDVLHQVFSPYGFVEKIVTFQKSAGFQALIQYQAQQCAASARTSLQ 582
+L + V ++ YP+T+DVLHQ+FS +G V KI+TF K+ FQAL+QY A A+ SL
Sbjct: 182 VLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLD 241
Query: 583 GRNIYDGCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLPS 702
G+NIY+ CC L I FS L L V YNND+SRDYT P+LPS
Sbjct: 242 GQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPS 281
>sp|Q9UKA9|PTBP2_HUMAN Polypyrimidine tract-binding protein 2 OS=Homo sapiens
GN=PTBP2 PE=1 SV=1
Length = 531
Score = 124 bits (310), Expect = 2e-027
Identities = 79/214 (36%), Positives = 117/214 (54%), Gaps = 10/214 (4%)
Frame = +3
Query: 849 ANTSAIAAAFGGGLPPGITGTNDRCTILVSNLNTDSVDEDKLFNLFSLYGNIVRIKLLRN 1028
A +A AAA G PG++ +LVSNLN + V LF LF +YG++ R+K+L N
Sbjct: 315 AAAAAAAAAAGRVGMPGVS-AGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYN 373
Query: 1029 KPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNYSKHPNI---TPGTD----SHDYVN 1187
K D AL+QM DG Q++LA++ L G ++GK + V SKH + G D + D+ N
Sbjct: 374 KKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFGN 433
Query: 1188 SNLNRFNRNAAKNYRYCCSPTKMIHLSTFPQDVTEEEVVNHVQERGAILNTKVFEMNGKK 1367
S L+RF + +KN++ P+ +HLS P V EE++ G + F + K
Sbjct: 434 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQDHKM 493
Query: 1368 *ALVQFENEEEAAEALVCKHATSLG-GSIIRISF 1466
AL+Q EEA +AL+ H +LG +R+SF
Sbjct: 494 -ALLQMATVEEAIQALIDLHNYNLGENHHLRVSF 526
Score = 116 bits (289), Expect = 7e-025
Identities = 54/100 (54%), Positives = 71/100 (71%)
Frame = +1
Query: 403 ILLVTVHHMLYPITVDVLHQVFSPYGFVEKIVTFQKSAGFQALIQYQAQQCAASARTSLQ 582
+L + + +M YP+T+DVLHQ+FS +G V KI+TF K+ FQAL+QY A A+ +L
Sbjct: 180 VLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALD 239
Query: 583 GRNIYDGCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLPS 702
G+NIY+ CC L I FS L L V YNND+SRDYT P+LPS
Sbjct: 240 GQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPS 279
>sp|Q91Z31|PTBP2_MOUSE Polypyrimidine tract-binding protein 2 OS=Mus musculus
GN=Ptbp2 PE=1 SV=2
Length = 531
Score = 124 bits (310), Expect = 2e-027
Identities = 79/214 (36%), Positives = 117/214 (54%), Gaps = 10/214 (4%)
Frame = +3
Query: 849 ANTSAIAAAFGGGLPPGITGTNDRCTILVSNLNTDSVDEDKLFNLFSLYGNIVRIKLLRN 1028
A +A AAA G PG++ +LVSNLN + V LF LF +YG++ R+K+L N
Sbjct: 315 AAAAAAAAAAGRVGMPGVS-AGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYN 373
Query: 1029 KPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNYSKHPNI---TPGTD----SHDYVN 1187
K D AL+QM DG Q++LA++ L G ++GK + V SKH + G D + D+ N
Sbjct: 374 KKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFGN 433
Query: 1188 SNLNRFNRNAAKNYRYCCSPTKMIHLSTFPQDVTEEEVVNHVQERGAILNTKVFEMNGKK 1367
S L+RF + +KN++ P+ +HLS P V EE++ G + F + K
Sbjct: 434 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQDHKM 493
Query: 1368 *ALVQFENEEEAAEALVCKHATSLG-GSIIRISF 1466
AL+Q EEA +AL+ H +LG +R+SF
Sbjct: 494 -ALLQMATVEEAIQALIDLHNYNLGENHHLRVSF 526
Score = 116 bits (289), Expect = 7e-025
Identities = 54/100 (54%), Positives = 71/100 (71%)
Frame = +1
Query: 403 ILLVTVHHMLYPITVDVLHQVFSPYGFVEKIVTFQKSAGFQALIQYQAQQCAASARTSLQ 582
+L + + +M YP+T+DVLHQ+FS +G V KI+TF K+ FQAL+QY A A+ +L
Sbjct: 180 VLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALD 239
Query: 583 GRNIYDGCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLPS 702
G+NIY+ CC L I FS L L V YNND+SRDYT P+LPS
Sbjct: 240 GQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPS 279
>sp|Q66H20|PTBP2_RAT Polypyrimidine tract-binding protein 2 OS=Rattus norvegicus
GN=Ptbp2 PE=2 SV=1
Length = 531
Score = 124 bits (310), Expect = 2e-027
Identities = 79/214 (36%), Positives = 117/214 (54%), Gaps = 10/214 (4%)
Frame = +3
Query: 849 ANTSAIAAAFGGGLPPGITGTNDRCTILVSNLNTDSVDEDKLFNLFSLYGNIVRIKLLRN 1028
A +A AAA G PG++ +LVSNLN + V LF LF +YG++ R+K+L N
Sbjct: 315 AAAAAAAAAAGRVGMPGVS-AGGNTVLLVSNLNEEMVTPQSLFTLFGVYGDVQRVKILYN 373
Query: 1029 KPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNYSKHPNI---TPGTD----SHDYVN 1187
K D AL+QM DG Q++LA++ L G ++GK + V SKH + G D + D+ N
Sbjct: 374 KKDSALIQMADGNQSQLAMNHLNGQKMYGKIIRVTLSKHQTVQLPREGLDDQGLTKDFGN 433
Query: 1188 SNLNRFNRNAAKNYRYCCSPTKMIHLSTFPQDVTEEEVVNHVQERGAILNTKVFEMNGKK 1367
S L+RF + +KN++ P+ +HLS P V EE++ G + F + K
Sbjct: 434 SPLHRFKKPGSKNFQNIFPPSATLHLSNIPPSVAEEDLRTLFANTGGTVKAFKFFQDHKM 493
Query: 1368 *ALVQFENEEEAAEALVCKHATSLG-GSIIRISF 1466
AL+Q EEA +AL+ H +LG +R+SF
Sbjct: 494 -ALLQMATVEEAIQALIDLHNYNLGENHHLRVSF 526
Score = 116 bits (289), Expect = 7e-025
Identities = 54/100 (54%), Positives = 71/100 (71%)
Frame = +1
Query: 403 ILLVTVHHMLYPITVDVLHQVFSPYGFVEKIVTFQKSAGFQALIQYQAQQCAASARTSLQ 582
+L + + +M YP+T+DVLHQ+FS +G V KI+TF K+ FQAL+QY A A+ +L
Sbjct: 180 VLRIIIDNMYYPVTLDVLHQIFSKFGAVLKIITFTKNNQFQALLQYGDPVNAQQAKLALD 239
Query: 583 GRNIYDGCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLPS 702
G+NIY+ CC L I FS L L V YNND+SRDYT P+LPS
Sbjct: 240 GQNIYNACCTLRIDFSKLVNLNVKYNNDKSRDYTRPDLPS 279
>sp|Q8BHD7|ROD1_MOUSE Regulator of differentiation 1 OS=Mus musculus GN=Rod1
PE=2 SV=1
Length = 523
Score = 124 bits (310), Expect = 2e-027
Identities = 75/212 (35%), Positives = 114/212 (53%), Gaps = 8/212 (3%)
Frame = +3
Query: 855 TSAIAAAFGGGLPPGITGTNDRCTILVSNLNTDSVDEDKLFNLFSLYGNIVRIKLLRNKP 1034
T +A G PG +G +LV+NLN D + LF LF +YG++ R+K++ NK
Sbjct: 307 TLTSSAVSGRMAIPGASGMPGNSVLLVTNLNPDFITPHGLFILFGVYGDVHRVKIMFNKK 366
Query: 1035 DHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNYSKHPNITPGTD-------SHDYVNSN 1193
++ALVQM D QA+LA++ L G L+GK L SKH + + + D+ NS
Sbjct: 367 ENALVQMADASQAQLAMNHLSGQRLYGKVLRATLSKHQAVQLPREGQEDQGLTKDFSNSP 426
Query: 1194 LNRFNRNAAKNYRYCCSPTKMIHLSTFPQDVTEEEVVNHVQERGAILNTKVFEMNGKK*A 1373
L+RF + +KN++ P+ +HLS P VT +++ N E G + F +K A
Sbjct: 427 LHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMA 486
Query: 1374 LVQFENEEEAAEALVCKHATSLG-GSIIRISF 1466
L+Q + EEA +AL+ H LG +R+SF
Sbjct: 487 LIQLGSVEEAIQALIELHNHDLGENHHLRVSF 518
>sp|Q9Z118|ROD1_RAT Regulator of differentiation 1 OS=Rattus norvegicus GN=Rod1
PE=2 SV=1
Length = 523
Score = 123 bits (308), Expect = 4e-027
Identities = 74/212 (34%), Positives = 114/212 (53%), Gaps = 8/212 (3%)
Frame = +3
Query: 855 TSAIAAAFGGGLPPGITGTNDRCTILVSNLNTDSVDEDKLFNLFSLYGNIVRIKLLRNKP 1034
T +A G PG +G +LV+NLN D + LF LF +YG++ R+K++ NK
Sbjct: 307 TLTSSAVSGRMAIPGASGIPGNSVLLVTNLNPDFITPHGLFILFGVYGDVHRVKIMFNKK 366
Query: 1035 DHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNYSKHPNITPGTD-------SHDYVNSN 1193
++ALVQM D QA++A++ L G L+GK L SKH + + + D+ NS
Sbjct: 367 ENALVQMADASQAQIAMNHLSGQRLYGKVLRATLSKHQAVQLPREGQEDQGLTKDFSNSP 426
Query: 1194 LNRFNRNAAKNYRYCCSPTKMIHLSTFPQDVTEEEVVNHVQERGAILNTKVFEMNGKK*A 1373
L+RF + +KN++ P+ +HLS P VT +++ N E G + F +K A
Sbjct: 427 LHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTMDDLKNLFTEAGCSVKAFKFFQKDRKMA 486
Query: 1374 LVQFENEEEAAEALVCKHATSLG-GSIIRISF 1466
L+Q + EEA +AL+ H LG +R+SF
Sbjct: 487 LIQLGSVEEAIQALIELHNHDLGENHHLRVSF 518
>sp|O95758|ROD1_HUMAN Regulator of differentiation 1 OS=Homo sapiens GN=ROD1
PE=1 SV=2
Length = 552
Score = 123 bits (307), Expect = 5e-027
Identities = 75/212 (35%), Positives = 114/212 (53%), Gaps = 8/212 (3%)
Frame = +3
Query: 855 TSAIAAAFGGGLPPGITGTNDRCTILVSNLNTDSVDEDKLFNLFSLYGNIVRIKLLRNKP 1034
T +A G PG +G +LV+NLN D + LF LF +YG++ R+K++ NK
Sbjct: 336 TITSSAVTGRMAIPGASGIPGNSVLLVTNLNPDLITPHGLFILFGVYGDVHRVKIMFNKK 395
Query: 1035 DHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNYSKHPNITPGTD-------SHDYVNSN 1193
++ALVQM D QA+LA++ L G L+GK L SKH + + + D+ NS
Sbjct: 396 ENALVQMADANQAQLAMNHLSGQRLYGKVLRATLSKHQAVQLPREGQEDQGLTKDFSNSP 455
Query: 1194 LNRFNRNAAKNYRYCCSPTKMIHLSTFPQDVTEEEVVNHVQERGAILNTKVFEMNGKK*A 1373
L+RF + +KN++ P+ +HLS P VT +++ N E G + F +K A
Sbjct: 456 LHRFKKPGSKNFQNIFPPSATLHLSNIPPSVTVDDLKNLFIEAGCSVKAFKFFQKDRKMA 515
Query: 1374 LVQFENEEEAAEALVCKHATSLG-GSIIRISF 1466
L+Q + EEA +AL+ H LG +R+SF
Sbjct: 516 LIQLGSVEEAIQALIELHNHDLGENHHLRVSF 547
>sp|P17225|PTBP1_MOUSE Polypyrimidine tract-binding protein 1 OS=Mus musculus
GN=Ptbp1 PE=1 SV=2
Length = 527
Score = 119 bits (297), Expect = 8e-026
Identities = 60/125 (48%), Positives = 80/125 (64%), Gaps = 1/125 (0%)
Frame = +1
Query: 403 ILLVTVHHMLYPITVDVLHQVFSPYGFVEKIVTFQKSAGFQALIQYQAQQCAASARTSLQ 582
+L + V ++ YP+T+DVLHQ+FS +G V KI+TF K+ FQAL+QY A A+ SL
Sbjct: 182 VLRIIVENLFYPVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLSLD 241
Query: 583 GRNIYDGCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLPS-EQKGRLPHPGYGDAGVAYP 759
G+NIY+ CC L I FS L L V YNND+SRDYT P+LPS + + L G++ P
Sbjct: 242 GQNIYNACCTLRIDFSKLTSLNVKYNNDKSRDYTRPDLPSGDSQPSLDQTMAAAFGLSVP 301
Query: 760 QVSNA 774
V A
Sbjct: 302 NVHGA 306
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,727,594,170
Number of Sequences: 518415
Number of Extensions: 61727594170
Number of Successful Extensions: 397900902
Number of sequences better than 0.0: 0
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