BLASTX 7.6.2
Query= UN15222 /QuerySize=1687
(1686 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G43190.1 | Symbols: | polypyrimidine tract-bi... 417 1e-116
TAIR9_protein||AT1G43190.2 | Symbols: | polypyrimidine tract-bi... 417 1e-116
TAIR9_protein||AT1G43190.3 | Symbols: | polypyrimidine tract-bi... 413 2e-115
TAIR9_protein||AT3G01150.1 | Symbols: PTB, ATPTB1, PTB1 | PTB1 (... 136 7e-032
TAIR9_protein||AT5G53180.1 | Symbols: ATPTB2, PTB2 | PTB2 (POLYP... 133 5e-031
TAIR9_protein||AT5G53180.2 | Symbols: ATPTB2, PTB2 | PTB2 (POLYP... 105 1e-022
TAIR9_protein||AT3G01150.2 | Symbols: PTB | PTB1 (POLYPYRIMIDINE... 93 5e-019
>TAIR9_protein||AT1G43190.1 | Symbols: | polypyrimidine tract-binding protein,
putative / heterogeneous nuclear ribonucleoprotein, putative |
chr1:16275432-16278185 REVERSE
Length = 433
Score = 417 bits (1071), Expect = 1e-116
Identities = 204/225 (90%), Positives = 215/225 (95%), Gaps = 1/225 (0%)
Frame = +1
Query: 109 MAESSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSS-ITALQF 285
MAESSKV+HVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSS ++ALQF
Sbjct: 1 MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQF 60
Query: 286 FTTVQPTIRGRNVYIQFSSHQELTTAEQNIHGREDEPNRILLVTVHHMLYPITVDVLHQV 465
FT VQPTIRGRNVY+QFSSHQELTT EQNIHGREDEPNRILLVT+HHMLYPITVDVLHQV
Sbjct: 61 FTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHMLYPITVDVLHQV 120
Query: 466 FSPYGFVEKIVTFQKSAGFQALIQYQAQQCAASARTSLQGRNIYDGCCQLDIQFSNLEEL 645
FSPYGFVEK+VTFQKSAGFQALIQYQ QQCAASART+LQGRNIYDGCCQLDIQFSNLEEL
Sbjct: 121 FSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSNLEEL 180
Query: 646 QVNYNNDRSRDYTNPNLPSEQKGRLPHPGYGDAGVAYPQVSNAKS 780
QVNYNNDRSRDYTNPNLP+EQKGR HP YGD GVAYPQ++N +
Sbjct: 181 QVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSA 225
Score = 413 bits (1061), Expect = 2e-115
Identities = 202/214 (94%), Positives = 208/214 (97%)
Frame = +3
Query: 846 MANTSAIAAAFGGGLPPGITGTNDRCTILVSNLNTDSVDEDKLFNLFSLYGNIVRIKLLR 1025
MANTSAIAAAFGGGLPPGITGTNDRCT+LVSNLN DS+DEDKLFNLFSLYGNIVRIKLLR
Sbjct: 220 MANTSAIAAAFGGGLPPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLR 279
Query: 1026 NKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNYSKHPNITPGTDSHDYVNSNLNRF 1205
NKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVN+SKHPNITPGTDSHDYVNSNLNRF
Sbjct: 280 NKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRF 339
Query: 1206 NRNAAKNYRYCCSPTKMIHLSTFPQDVTEEEVVNHVQERGAILNTKVFEMNGKK*ALVQF 1385
NRNAAKNYRYCCSPTKMIHLST PQDVTEEEV+NHVQE GA++NTKVFEMNGKK ALVQF
Sbjct: 340 NRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQF 399
Query: 1386 ENEEEAAEALVCKHATSLGGSIIRISFFQLQTI* 1487
ENEEEAAEALVCKHATSLGGSIIRISF QLQTI*
Sbjct: 400 ENEEEAAEALVCKHATSLGGSIIRISFSQLQTI* 433
>TAIR9_protein||AT1G43190.2 | Symbols: | polypyrimidine tract-binding protein,
putative / heterogeneous nuclear ribonucleoprotein, putative |
chr1:16275432-16278185 REVERSE
Length = 433
Score = 417 bits (1071), Expect = 1e-116
Identities = 204/225 (90%), Positives = 215/225 (95%), Gaps = 1/225 (0%)
Frame = +1
Query: 109 MAESSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSS-ITALQF 285
MAESSKV+HVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSS ++ALQF
Sbjct: 1 MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQF 60
Query: 286 FTTVQPTIRGRNVYIQFSSHQELTTAEQNIHGREDEPNRILLVTVHHMLYPITVDVLHQV 465
FT VQPTIRGRNVY+QFSSHQELTT EQNIHGREDEPNRILLVT+HHMLYPITVDVLHQV
Sbjct: 61 FTNVQPTIRGRNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHMLYPITVDVLHQV 120
Query: 466 FSPYGFVEKIVTFQKSAGFQALIQYQAQQCAASARTSLQGRNIYDGCCQLDIQFSNLEEL 645
FSPYGFVEK+VTFQKSAGFQALIQYQ QQCAASART+LQGRNIYDGCCQLDIQFSNLEEL
Sbjct: 121 FSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSNLEEL 180
Query: 646 QVNYNNDRSRDYTNPNLPSEQKGRLPHPGYGDAGVAYPQVSNAKS 780
QVNYNNDRSRDYTNPNLP+EQKGR HP YGD GVAYPQ++N +
Sbjct: 181 QVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSA 225
Score = 413 bits (1061), Expect = 2e-115
Identities = 202/214 (94%), Positives = 208/214 (97%)
Frame = +3
Query: 846 MANTSAIAAAFGGGLPPGITGTNDRCTILVSNLNTDSVDEDKLFNLFSLYGNIVRIKLLR 1025
MANTSAIAAAFGGGLPPGITGTNDRCT+LVSNLN DS+DEDKLFNLFSLYGNIVRIKLLR
Sbjct: 220 MANTSAIAAAFGGGLPPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLR 279
Query: 1026 NKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNYSKHPNITPGTDSHDYVNSNLNRF 1205
NKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVN+SKHPNITPGTDSHDYVNSNLNRF
Sbjct: 280 NKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRF 339
Query: 1206 NRNAAKNYRYCCSPTKMIHLSTFPQDVTEEEVVNHVQERGAILNTKVFEMNGKK*ALVQF 1385
NRNAAKNYRYCCSPTKMIHLST PQDVTEEEV+NHVQE GA++NTKVFEMNGKK ALVQF
Sbjct: 340 NRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQF 399
Query: 1386 ENEEEAAEALVCKHATSLGGSIIRISFFQLQTI* 1487
ENEEEAAEALVCKHATSLGGSIIRISF QLQTI*
Sbjct: 400 ENEEEAAEALVCKHATSLGGSIIRISFSQLQTI* 433
>TAIR9_protein||AT1G43190.3 | Symbols: | polypyrimidine tract-binding protein,
putative / heterogeneous nuclear ribonucleoprotein, putative |
chr1:16275432-16278185 REVERSE
Length = 431
Score = 413 bits (1061), Expect = 2e-115
Identities = 202/214 (94%), Positives = 208/214 (97%)
Frame = +3
Query: 846 MANTSAIAAAFGGGLPPGITGTNDRCTILVSNLNTDSVDEDKLFNLFSLYGNIVRIKLLR 1025
MANTSAIAAAFGGGLPPGITGTNDRCT+LVSNLN DS+DEDKLFNLFSLYGNIVRIKLLR
Sbjct: 218 MANTSAIAAAFGGGLPPGITGTNDRCTVLVSNLNADSIDEDKLFNLFSLYGNIVRIKLLR 277
Query: 1026 NKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNYSKHPNITPGTDSHDYVNSNLNRF 1205
NKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVN+SKHPNITPGTDSHDYVNSNLNRF
Sbjct: 278 NKPDHALVQMGDGFQAELAVHFLKGAMLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNRF 337
Query: 1206 NRNAAKNYRYCCSPTKMIHLSTFPQDVTEEEVVNHVQERGAILNTKVFEMNGKK*ALVQF 1385
NRNAAKNYRYCCSPTKMIHLST PQDVTEEEV+NHVQE GA++NTKVFEMNGKK ALVQF
Sbjct: 338 NRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAVVNTKVFEMNGKKQALVQF 397
Query: 1386 ENEEEAAEALVCKHATSLGGSIIRISFFQLQTI* 1487
ENEEEAAEALVCKHATSLGGSIIRISF QLQTI*
Sbjct: 398 ENEEEAAEALVCKHATSLGGSIIRISFSQLQTI* 431
Score = 408 bits (1047), Expect = 7e-114
Identities = 202/225 (89%), Positives = 213/225 (94%), Gaps = 3/225 (1%)
Frame = +1
Query: 109 MAESSKVIHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSS-ITALQF 285
MAESSKV+HVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSS ++ALQF
Sbjct: 1 MAESSKVVHVRNVGHEISENDLLQLFQPFGVITKLVMLRAKNQALLQMQDVSSAVSALQF 60
Query: 286 FTTVQPTIRGRNVYIQFSSHQELTTAEQNIHGREDEPNRILLVTVHHMLYPITVDVLHQV 465
FT VQPTI RNVY+QFSSHQELTT EQNIHGREDEPNRILLVT+HHMLYPITVDVLHQV
Sbjct: 61 FTNVQPTI--RNVYVQFSSHQELTTIEQNIHGREDEPNRILLVTIHHMLYPITVDVLHQV 118
Query: 466 FSPYGFVEKIVTFQKSAGFQALIQYQAQQCAASARTSLQGRNIYDGCCQLDIQFSNLEEL 645
FSPYGFVEK+VTFQKSAGFQALIQYQ QQCAASART+LQGRNIYDGCCQLDIQFSNLEEL
Sbjct: 119 FSPYGFVEKLVTFQKSAGFQALIQYQVQQCAASARTALQGRNIYDGCCQLDIQFSNLEEL 178
Query: 646 QVNYNNDRSRDYTNPNLPSEQKGRLPHPGYGDAGVAYPQVSNAKS 780
QVNYNNDRSRDYTNPNLP+EQKGR HP YGD GVAYPQ++N +
Sbjct: 179 QVNYNNDRSRDYTNPNLPAEQKGRSSHPCYGDTGVAYPQMANTSA 223
>TAIR9_protein||AT3G01150.1 | Symbols: PTB, ATPTB1, PTB1 | PTB1 (POLYPYRIMIDINE
TRACT-BINDING PROTEIN 1); RNA binding / nucleic acid binding /
nucleotide binding | chr3:51732-54344 FORWARD
Length = 400
Score = 136 bits (340), Expect = 7e-032
Identities = 83/223 (37%), Positives = 134/223 (60%), Gaps = 18/223 (8%)
Frame = +1
Query: 82 SNLSQTRLVMAES-SKVIHVRNVGHEISENDLLQLFQPFGVI--TKLVMLRAKNQALLQM 252
S+ QT+ ++ SKV+H+RN+ E E +L+ L + FG I TK + +NQA ++
Sbjct: 2 SSSGQTQFRYTQTPSKVVHLRNLPWECVEEELIDLCKRFGKIVNTKSNVGANRNQAFVEF 61
Query: 253 QDVSSITAL--QFFTTVQPT-IRGRNVYIQFSSHQELTTAEQNIHGREDEPNRILLVTVH 423
D++ ++ + ++ +P IRG+ VYIQ+S+ E+ N D P +LLVT
Sbjct: 62 ADLNQAISMVSYYASSSEPAQIRGKTVYIQYSNRHEIV----NNQSPGDVPGNVLLVTFE 117
Query: 424 HM-LYPITVDVLHQVFSPYGFVEKIVTFQKSAGFQALIQYQAQQCAASARTSLQGRNI-- 594
+ + +++DV+H VFS +GFV KI TF+K+AGFQAL+Q+ + A++AR++L GR+I
Sbjct: 118 GVESHEVSIDVIHLVFSAFGFVHKIATFEKAAGFQALVQFTDVETASAARSALDGRSIPR 177
Query: 595 -----YDGCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLPSEQ 708
+ G C L + +S +L + + + RSRDYTNP LP Q
Sbjct: 178 YLLSAHVGSCSLRMSYSAHTDLNIKFQSHRSRDYTNPYLPVNQ 220
Score = 93 bits (229), Expect = 5e-019
Identities = 56/134 (41%), Positives = 76/134 (56%), Gaps = 3/134 (2%)
Frame = +1
Query: 388 DEPNRILLVTVHHMLYPITVDVLHQVFSPYGFVEKIVTFQKSAGFQALIQYQAQQCAASA 567
+ + +LL + +M Y +TVDVLH VFS YG V+KI F+K+ QALIQY AA A
Sbjct: 239 ESQSNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMA 298
Query: 568 RTSLQGRNIYD-GCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLP--SEQKGRLPHPGYG 738
+ +L+G IYD G C+L + +S +L V +D+SRDYT P+L QKG
Sbjct: 299 KEALEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVAQKGPAVSGSAP 358
Query: 739 DAGVAYPQVSNAKS 780
AG PQ + S
Sbjct: 359 PAGWQNPQAQSQYS 372
>TAIR9_protein||AT5G53180.1 | Symbols: ATPTB2, PTB2 | PTB2 (POLYPYRIMIDINE
TRACT-BINDING PROTEIN 2); RNA binding / nucleic acid binding /
nucleotide binding | chr5:21568393-21571537 REVERSE
Length = 430
Score = 133 bits (333), Expect = 5e-031
Identities = 79/206 (38%), Positives = 128/206 (62%), Gaps = 17/206 (8%)
Frame = +1
Query: 121 SKVIHVRNVGHEISENDLLQLFQPFGVI--TKLVMLRAKNQALLQMQDVS-SITALQFF- 288
SKV+H+RN+ E +E +L++L +PFG + TK + +NQA ++ +D++ +I + ++
Sbjct: 17 SKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFIEFEDLNQAIQMISYYA 76
Query: 289 TTVQPT-IRGRNVYIQFSSHQELTTAEQNIHGREDEPNRILLVTVH-HMLYPITVDVLHQ 462
++ +P +RG+ VY+Q+S+ QE+ N D +LLVT+ +++DVLH
Sbjct: 77 SSSEPAQVRGKTVYLQYSNRQEIV----NNKTTADVVGNVLLVTIEGDDARMVSIDVLHL 132
Query: 463 VFSPYGFVEKIVTFQKSAGFQALIQYQAQQCAASARTSLQGRNI-------YDGCCQLDI 621
VFS +GFV KI TF+K+AG+QAL+Q+ + A +A+ +L GR+I G C L I
Sbjct: 133 VFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYLLAETVGQCSLKI 192
Query: 622 QFSNLEELQVNYNNDRSRDYTNPNLP 699
+S +L V + + RSRDYTNP LP
Sbjct: 193 TYSAHTDLTVKFQSHRSRDYTNPYLP 218
Score = 105 bits (260), Expect = 1e-022
Identities = 60/139 (43%), Positives = 86/139 (61%), Gaps = 9/139 (6%)
Frame = +1
Query: 373 IHGREDEP-NRILLVTVHHMLYPITVDVLHQVFSPYGFVEKIVTFQKSAGFQALIQYQAQ 549
+ G++ EP + +LL ++ +M Y +T+DVLH VF+ +G V+KI F K+ G QALIQY
Sbjct: 234 VDGKKMEPESNVLLASIENMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDV 293
Query: 550 QCAASARTSLQGRNIYD-GCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLP---SEQKGR 717
Q A A+ +L+G IYD G C+L I +S +L + NNDRSRDYT PN P +Q +
Sbjct: 294 QTAVVAKEALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVPMPQQPVQ 353
Query: 718 LPHPG----YGDAGVAYPQ 762
P+ G Y AG ++ Q
Sbjct: 354 NPYAGNPQQYHAAGGSHHQ 372
>TAIR9_protein||AT5G53180.2 | Symbols: ATPTB2, PTB2 | PTB2 (POLYPYRIMIDINE
TRACT-BINDING PROTEIN 2); RNA binding / nucleotide binding |
chr5:21568393-21571081 REVERSE
Length = 330
Score = 105 bits (260), Expect = 1e-022
Identities = 60/139 (43%), Positives = 86/139 (61%), Gaps = 9/139 (6%)
Frame = +1
Query: 373 IHGREDEP-NRILLVTVHHMLYPITVDVLHQVFSPYGFVEKIVTFQKSAGFQALIQYQAQ 549
+ G++ EP + +LL ++ +M Y +T+DVLH VF+ +G V+KI F K+ G QALIQY
Sbjct: 134 VDGKKMEPESNVLLASIENMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDV 193
Query: 550 QCAASARTSLQGRNIYD-GCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLP---SEQKGR 717
Q A A+ +L+G IYD G C+L I +S +L + NNDRSRDYT PN P +Q +
Sbjct: 194 QTAVVAKEALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVPMPQQPVQ 253
Query: 718 LPHPG----YGDAGVAYPQ 762
P+ G Y AG ++ Q
Sbjct: 254 NPYAGNPQQYHAAGGSHHQ 272
Score = 77 bits (187), Expect = 4e-014
Identities = 40/86 (46%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
Frame = +1
Query: 463 VFSPYGFVEKIVTFQKSAGFQALIQYQAQQCAASARTSLQGRNI-------YDGCCQLDI 621
VFS +GFV KI TF+K+AG+QAL+Q+ + A +A+ +L GR+I G C L I
Sbjct: 33 VFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYLLAETVGQCSLKI 92
Query: 622 QFSNLEELQVNYNNDRSRDYTNPNLP 699
+S +L V + + RSRDYTNP LP
Sbjct: 93 TYSAHTDLTVKFQSHRSRDYTNPYLP 118
>TAIR9_protein||AT3G01150.2 | Symbols: PTB | PTB1 (POLYPYRIMIDINE TRACT-BINDING
PROTEIN 1); RNA binding / nucleic acid binding / nucleotide binding |
chr3:51732-54344 FORWARD
Length = 371
Score = 93 bits (229), Expect = 5e-019
Identities = 56/134 (41%), Positives = 76/134 (56%), Gaps = 3/134 (2%)
Frame = +1
Query: 388 DEPNRILLVTVHHMLYPITVDVLHQVFSPYGFVEKIVTFQKSAGFQALIQYQAQQCAASA 567
+ + +LL + +M Y +TVDVLH VFS YG V+KI F+K+ QALIQY AA A
Sbjct: 210 ESQSNVLLGLIENMQYAVTVDVLHTVFSAYGTVQKIAIFEKNGSTQALIQYSDIPTAAMA 269
Query: 568 RTSLQGRNIYD-GCCQLDIQFSNLEELQVNYNNDRSRDYTNPNLP--SEQKGRLPHPGYG 738
+ +L+G IYD G C+L + +S +L V +D+SRDYT P+L QKG
Sbjct: 270 KEALEGHCIYDGGYCKLRLSYSRHTDLNVKAFSDKSRDYTLPDLSLLVAQKGPAVSGSAP 329
Query: 739 DAGVAYPQVSNAKS 780
AG PQ + S
Sbjct: 330 PAGWQNPQAQSQYS 343
Score = 57 bits (135), Expect = 4e-008
Identities = 29/79 (36%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Frame = +1
Query: 493 IVTFQKSAGFQALIQYQAQQCAASARTSLQGRNI-------YDGCCQLDIQFSNLEELQV 651
+VTF+ +AL+Q+ + A++AR++L GR+I + G C L + +S +L +
Sbjct: 113 LVTFEGVESHEALVQFTDVETASAARSALDGRSIPRYLLSAHVGSCSLRMSYSAHTDLNI 172
Query: 652 NYNNDRSRDYTNPNLPSEQ 708
+ + RSRDYTNP LP Q
Sbjct: 173 KFQSHRSRDYTNPYLPVNQ 191
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,918,598,619
Number of Sequences: 33410
Number of Extensions: 7918598619
Number of Successful Extensions: 269723333
Number of sequences better than 0.0: 0
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