BLASTX 7.6.2
Query= UN15249 /QuerySize=687
(686 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G37240.1 | Symbols: | INVOLVED IN: biological... 325 2e-089
TAIR9_protein||AT5G65840.1 | Symbols: | FUNCTIONS IN: molecular... 80 1e-015
>TAIR9_protein||AT2G37240.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold
(InterPro:IPR012336); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G65840.1); Has 252 Blast hits to 252 proteins
in 46 species: Archae - 0; Bacteria - 20; Metazoa - 145; Fungi - 10;
Plants - 66; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). |
chr2:15640235-15641720 REVERSE
Length = 249
Score = 325 bits (831), Expect = 2e-089
Identities = 174/202 (86%), Positives = 181/202 (89%), Gaps = 8/202 (3%)
Frame = +1
Query: 13 MAASLSSSSSITSITLQPKPKTIYGLGTVNFGGYSVNSH--GVSLRRSAVVVSAITGAS- 183
MA +LSSSS+ITSITLQPK KTI+GLGTV GYSV SH VSLRRSAVVVSAITGAS
Sbjct: 1 MAIALSSSSTITSITLQPKLKTIHGLGTV-LPGYSVKSHFRSVSLRRSAVVVSAITGASS 59
Query: 184 ----GTETADLLETVKVSDLRGNEIPISDLWKDRKAVVAFARHFGCVLCRKRAAYLAEKK 351
G TAD L+TVKV DLRGNEIPISDLWKDRKAVVAFARHFGCVLCRKRAAYLAEKK
Sbjct: 60 GAGIGKGTADSLDTVKVLDLRGNEIPISDLWKDRKAVVAFARHFGCVLCRKRAAYLAEKK 119
Query: 352 DVMDASGVTLVLIGPGSIDQAKTFVEQTKFEGEVYADPNHASYEALKFASGVSVTFTPKA 531
DVMDASGV LVLIGPGSIDQA TFVEQTKF+GEVYADPNHASYEAL+F SGVSVTFTPKA
Sbjct: 120 DVMDASGVALVLIGPGSIDQANTFVEQTKFKGEVYADPNHASYEALEFVSGVSVTFTPKA 179
Query: 532 AMKIIESYMEGYRQDWKLSFMK 597
AMKI+ESYMEGYRQDWKLSFMK
Sbjct: 180 AMKILESYMEGYRQDWKLSFMK 201
Score = 60 bits (145), Expect = 9e-010
Identities = 29/34 (85%)
Frame = +3
Query: 585 LVYEKKKKNISYIRKDKEAGDDPPVEEILKACCA 686
LV K NISYIRKDKEAGDDPPVEEILKACCA
Sbjct: 215 LVAGPGKDNISYIRKDKEAGDDPPVEEILKACCA 248
>TAIR9_protein||AT5G65840.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast stroma, chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Thioredoxin fold (InterPro:IPR012335), Thioredoxin-like fold
(InterPro:IPR012336); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT2G37240.1); Has 167 Blast hits to 165 proteins
in 51 species: Archae - 0; Bacteria - 28; Metazoa - 51; Fungi - 13;
Plants - 59; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). |
chr5:26344097-26346057 REVERSE
Length = 276
Score = 80 bits (195), Expect = 1e-015
Identities = 45/127 (35%), Positives = 65/127 (51%), Gaps = 3/127 (2%)
Frame = +1
Query: 190 ETADLLETVKVSDLRGNEIPISDLW--KDRKAVVAFARHFGCVLCRKRAAYLAEKKDVMD 363
+ ++L V + G + SDLW KD A V RHFGCV C + A L E K D
Sbjct: 87 DIGEILGDVSIFTASGQRVQFSDLWDQKDGIAAVVLLRHFGCVCCWELATALKEAKPRFD 146
Query: 364 ASGVTLVLIGPGSIDQAKTFVEQTKFEGE-VYADPNHASYEALKFASGVSVTFTPKAAMK 540
A+GV L+ +G G+ D+A+ + F E +YADP +Y+ L G+ TF A+ K
Sbjct: 147 AAGVKLIAVGVGTPDKARILATRLPFPMECLYADPERKAYDVLGLYFGLGRTFFNPASTK 206
Query: 541 IIESYME 561
+ + E
Sbjct: 207 VFSRFSE 213
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,918,598,619
Number of Sequences: 33410
Number of Extensions: 7918598619
Number of Successful Extensions: 269723333
Number of sequences better than 0.0: 0
|
