BLASTX 7.6.2
Query= UN15290 /QuerySize=867
(866 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G01410.1 | Symbols: | RNase H domain-containi... 182 4e-046
TAIR9_protein||AT3G01410.2 | Symbols: | RNase H domain-containi... 182 4e-046
TAIR9_protein||AT1G24090.1 | Symbols: | RNase H domain-containi... 142 3e-034
TAIR9_protein||AT5G51080.1 | Symbols: | RNase H domain-containi... 142 3e-034
TAIR9_protein||AT5G51080.2 | Symbols: | RNase H domain-containi... 142 3e-034
TAIR9_protein||AT5G51080.3 | Symbols: | RNase H domain-containi... 142 3e-034
>TAIR9_protein||AT3G01410.1 | Symbols: | RNase H domain-containing protein |
chr3:153650-155439 REVERSE
Length = 295
Score = 182 bits (460), Expect = 4e-046
Identities = 92/139 (66%), Positives = 110/139 (79%), Gaps = 1/139 (0%)
Frame = -2
Query: 664 QFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYALDKGF 485
+FDGAS+GNPGKAGAGAVLR++ DN VLFYLR+G+G ATNNVAEYRAL+LGL ALDKGF
Sbjct: 158 EFDGASKGNPGKAGAGAVLRAS-DNSVLFYLREGVGNATNNVAEYRALLLGLRSALDKGF 216
Query: 484 RNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSEADAQ 305
+NV + GDS+LVC QV W+ NHPK+AEL + AK+LM+ F + I+HI RE NSEAD Q
Sbjct: 217 KNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEADKQ 276
Query: 304 ANRAVNFADGQIQCESRG* 248
AN A+ ADGQ Q S G*
Sbjct: 277 ANSAIFLADGQTQVISGG* 295
>TAIR9_protein||AT3G01410.2 | Symbols: | RNase H domain-containing protein |
chr3:153650-155439 REVERSE
Length = 295
Score = 182 bits (460), Expect = 4e-046
Identities = 92/139 (66%), Positives = 110/139 (79%), Gaps = 1/139 (0%)
Frame = -2
Query: 664 QFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYALDKGF 485
+FDGAS+GNPGKAGAGAVLR++ DN VLFYLR+G+G ATNNVAEYRAL+LGL ALDKGF
Sbjct: 158 EFDGASKGNPGKAGAGAVLRAS-DNSVLFYLREGVGNATNNVAEYRALLLGLRSALDKGF 216
Query: 484 RNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSEADAQ 305
+NV + GDS+LVC QV W+ NHPK+AEL + AK+LM+ F + I+HI RE NSEAD Q
Sbjct: 217 KNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEADKQ 276
Query: 304 ANRAVNFADGQIQCESRG* 248
AN A+ ADGQ Q S G*
Sbjct: 277 ANSAIFLADGQTQVISGG* 295
>TAIR9_protein||AT1G24090.1 | Symbols: | RNase H domain-containing protein |
chr1:8520834-8524690 FORWARD
Length = 536
Score = 142 bits (357), Expect = 3e-034
Identities = 73/147 (49%), Positives = 104/147 (70%), Gaps = 4/147 (2%)
Frame = -2
Query: 721 DQVAQYERPTYPPPPRNFAQFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNN 542
+++++ E Y F +FDGAS+GNPG +GA AVL+ T D ++ +RQGLGIATNN
Sbjct: 201 EKLSKVEPSAYISDETCFIEFDGASKGNPGLSGAAAVLK-TEDGSLICRVRQGLGIATNN 259
Query: 541 VAEYRALILGLEYALDKGFRNVRIKGDSLLVC---NQVLDEWRVNHPKLAELNEYAKDLM 371
AEY ALILGL+YA++KG++N+++KGDS LVC Q+ +W+VNH LA+L++ AK L
Sbjct: 260 AAEYHALILGLKYAIEKGYKNIKVKGDSKLVCMQKQQIKGQWKVNHEVLAKLHKEAKLLC 319
Query: 370 SRFNSCRIQHIGREFNSEADAQANRAV 290
++ S I H+ R N++AD QAN AV
Sbjct: 320 NKCVSFEISHVLRNLNADADEQANLAV 346
>TAIR9_protein||AT5G51080.1 | Symbols: | RNase H domain-containing protein |
chr5:20769022-20770675 REVERSE
Length = 323
Score = 142 bits (357), Expect = 3e-034
Identities = 67/133 (50%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Frame = -2
Query: 664 QFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYALDKGF 485
+FDGAS+GNPG +GA AVL+ T D ++F +RQGLGIATNN AEY LILGL++A++KG+
Sbjct: 189 EFDGASKGNPGLSGAAAVLK-TEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHAIEKGY 247
Query: 484 RNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSEADAQ 305
+++K DS LVC Q+ +W+VNH L++L++ AK L + S I H+ R NS+AD Q
Sbjct: 248 TKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRSLNSDADEQ 307
Query: 304 ANRAVNFADGQIQ 266
AN A ++G+++
Sbjct: 308 ANMAARLSEGEVE 320
>TAIR9_protein||AT5G51080.2 | Symbols: | RNase H domain-containing protein |
chr5:20769022-20770675 REVERSE
Length = 323
Score = 142 bits (357), Expect = 3e-034
Identities = 67/133 (50%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Frame = -2
Query: 664 QFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYALDKGF 485
+FDGAS+GNPG +GA AVL+ T D ++F +RQGLGIATNN AEY LILGL++A++KG+
Sbjct: 189 EFDGASKGNPGLSGAAAVLK-TEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHAIEKGY 247
Query: 484 RNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSEADAQ 305
+++K DS LVC Q+ +W+VNH L++L++ AK L + S I H+ R NS+AD Q
Sbjct: 248 TKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRSLNSDADEQ 307
Query: 304 ANRAVNFADGQIQ 266
AN A ++G+++
Sbjct: 308 ANMAARLSEGEVE 320
>TAIR9_protein||AT5G51080.3 | Symbols: | RNase H domain-containing protein |
chr5:20769022-20770486 REVERSE
Length = 260
Score = 142 bits (357), Expect = 3e-034
Identities = 67/133 (50%), Positives = 97/133 (72%), Gaps = 1/133 (0%)
Frame = -2
Query: 664 QFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYALDKGF 485
+FDGAS+GNPG +GA AVL+ T D ++F +RQGLGIATNN AEY LILGL++A++KG+
Sbjct: 126 EFDGASKGNPGLSGAAAVLK-TEDGSLIFKMRQGLGIATNNAAEYHGLILGLKHAIEKGY 184
Query: 484 RNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSEADAQ 305
+++K DS LVC Q+ +W+VNH L++L++ AK L + S I H+ R NS+AD Q
Sbjct: 185 TKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRSLNSDADEQ 244
Query: 304 ANRAVNFADGQIQ 266
AN A ++G+++
Sbjct: 245 ANMAARLSEGEVE 257
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,008,562,544
Number of Sequences: 33410
Number of Extensions: 8008562544
Number of Successful Extensions: 274948466
Number of sequences better than 0.0: 0
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