BLASTX 7.6.2
Query= UN15345 /QuerySize=864
(863 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G52650.1 | Symbols: | 40S ribosomal protein S... 285 2e-077
TAIR9_protein||AT4G25740.1 | Symbols: | 40S ribosomal protein S... 282 3e-076
TAIR9_protein||AT5G41520.1 | Symbols: | 40S ribosomal protein S... 262 4e-070
TAIR9_protein||AT4G25740.2 | Symbols: | 40S ribosomal protein S... 213 1e-055
TAIR9_protein||AT5G41520.2 | Symbols: | 40S ribosomal protein S... 181 8e-046
>TAIR9_protein||AT5G52650.1 | Symbols: | 40S ribosomal protein S10 (RPS10C) |
chr5:21355781-21357003 REVERSE
Length = 180
Score = 285 bits (729), Expect = 2e-077
Identities = 141/156 (90%), Positives = 145/156 (92%), Gaps = 3/156 (1%)
Frame = -2
Query: 778 MIITETNRREICKYLFKEVVLFAKKDFNLPKHPLIESVPNLQVIKLMQSFKSKEYVRETF 599
MII+E NR+EICKYLFKE V FAKKDFNL KHPLI+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1 MIISEANRKEICKYLFKEGVCFAKKDFNLAKHPLID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 598 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPIGRPFGGPPGDRPRGPRFE-GD 422
AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP GRPFGGPPGDR RGPR E GD
Sbjct: 60 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRSRGPRHEGGD 119
Query: 421 RPRFGDRDGYRAGPR-GGDAGGEKGGAPADYQPSFQ 317
RPRFGDRDGYRAGPR GG+ GGEKGGAPADYQPSFQ
Sbjct: 120 RPRFGDRDGYRAGPRAGGEFGGEKGGAPADYQPSFQ 155
>TAIR9_protein||AT4G25740.1 | Symbols: | 40S ribosomal protein S10 (RPS10A) |
chr4:13107488-13108751 REVERSE
Length = 178
Score = 282 bits (720), Expect = 3e-076
Identities = 139/155 (89%), Positives = 143/155 (92%), Gaps = 5/155 (3%)
Frame = -2
Query: 778 MIITETNRREICKYLFKEVVLFAKKDFNLPKHPLIESVPNLQVIKLMQSFKSKEYVRETF 599
MII+E NRREICKYLFKE V FAKKDFNLPKHPLI+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 598 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPIGRPFGGPPGDRPRG-PRFEGD 422
AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP GRPFGGPPGDR RG PR +GD
Sbjct: 60 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPPGDRQRGPPRSDGD 119
Query: 421 RPRFGDRDGYRAGPRGGDAGGEKGGAPADYQPSFQ 317
RPRFGDRDGYR GPRGGD EKGGAPAD+QPSFQ
Sbjct: 120 RPRFGDRDGYRGGPRGGD---EKGGAPADFQPSFQ 151
Score = 57 bits (136), Expect = 1e-008
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -1
Query: 215 GGGGRPGFGRGAGGYNAAAPSGSGLP* 135
GGGGRPGFGRGAGGY+AAAPSGSG P*
Sbjct: 152 GGGGRPGFGRGAGGYSAAAPSGSGFP* 178
>TAIR9_protein||AT5G41520.1 | Symbols: | 40S ribosomal protein S10 (RPS10B) |
chr5:16609377-16610583 REVERSE
Length = 181
Score = 262 bits (667), Expect = 4e-070
Identities = 128/155 (82%), Positives = 139/155 (89%), Gaps = 3/155 (1%)
Frame = -2
Query: 778 MIITETNRREICKYLFKEVVLFAKKDFNLPKHPLIESVPNLQVIKLMQSFKSKEYVRETF 599
MII+ETNRREI KYLFKE VLFAKKDFNLP+HPLIESVPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1 MIISETNRREISKYLFKEGVLFAKKDFNLPQHPLIESVPNLQVIKLMQSFKSKEYVRETF 60
Query: 598 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPIGRPFGGPPGDRPRG-PRFEGD 422
AWMHYYWFLTNEGI+FLRTYLNLPS++VPATLKK KP+GRPFGG GDRPRG PR +G+
Sbjct: 61 AWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG-GGDRPRGPPRGDGE 119
Query: 421 RPRFGDRDGYRAGPRGGDAGGEKGGAPADYQPSFQ 317
R RFGDRDGYR GP+ G G+K GAPADYQP F+
Sbjct: 120 R-RFGDRDGYRGGPKSGGEYGDKAGAPADYQPGFR 153
>TAIR9_protein||AT4G25740.2 | Symbols: | 40S ribosomal protein S10 (RPS10A) |
chr4:13107488-13108751 REVERSE
Length = 150
Score = 213 bits (541), Expect = 1e-055
Identities = 112/150 (74%), Positives = 118/150 (78%), Gaps = 9/150 (6%)
Frame = -2
Query: 778 MIITETNRREICKYLFKEVVLFAKKDFNLPKHPLIESVPNLQVIKLMQSFKSKEYVRETF 599
MII+E NRREICKYLFKE V FAKKDFNLPKHPLI+ VPNLQVIKLMQSFKSKEYVRETF
Sbjct: 1 MIISENNRREICKYLFKEGVCFAKKDFNLPKHPLID-VPNLQVIKLMQSFKSKEYVRETF 59
Query: 598 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPIGRPFGGPPGDRPRGPRFEGDR 419
AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKP GRPFGGP G +G +
Sbjct: 60 AWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPGGRPFGGPRGGDEKGGAPADFQ 119
Query: 418 PRF---GDRDGYRAGPRGGDAGGEKGGAPA 338
P F G R G+ G AGG AP+
Sbjct: 120 PSFQGGGGRPGF-----GRGAGGYSAAAPS 144
Score = 57 bits (136), Expect = 1e-008
Identities = 24/27 (88%), Positives = 25/27 (92%)
Frame = -1
Query: 215 GGGGRPGFGRGAGGYNAAAPSGSGLP* 135
GGGGRPGFGRGAGGY+AAAPSGSG P*
Sbjct: 124 GGGGRPGFGRGAGGYSAAAPSGSGFP* 150
>TAIR9_protein||AT5G41520.2 | Symbols: | 40S ribosomal protein S10 (RPS10B) |
chr5:16609377-16610203 REVERSE
Length = 135
Score = 181 bits (457), Expect = 8e-046
Identities = 86/109 (78%), Positives = 95/109 (87%), Gaps = 3/109 (2%)
Frame = -2
Query: 640 MQSFKSKEYVRETFAWMHYYWFLTNEGIEFLRTYLNLPSDVVPATLKKSAKPIGRPFGGP 461
MQSFKSKEYVRETFAWMHYYWFLTNEGI+FLRTYLNLPS++VPATLKK KP+GRPFGG
Sbjct: 1 MQSFKSKEYVRETFAWMHYYWFLTNEGIDFLRTYLNLPSEIVPATLKKQQKPLGRPFGG- 59
Query: 460 PGDRPRG-PRFEGDRPRFGDRDGYRAGPRGGDAGGEKGGAPADYQPSFQ 317
GDRPRG PR +G+R RFGDRDGYR GP+ G G+K GAPADYQP F+
Sbjct: 60 GGDRPRGPPRGDGER-RFGDRDGYRGGPKSGGEYGDKAGAPADYQPGFR 107
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,008,562,544
Number of Sequences: 33410
Number of Extensions: 8008562544
Number of Successful Extensions: 274948466
Number of sequences better than 0.0: 0
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