BLASTX 7.6.2

Query= UN15460 /QuerySize=1479
        (1478 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G18990.1 | Symbols: VRN1, REM39 | VRN1 (REDUCE...    614   7e-176
TAIR9_protein||AT1G49480.1 | Symbols: RTV1 | RTV1 (related to ve...    326   3e-089
TAIR9_protein||AT4G33280.1 | Symbols:  | DNA binding / transcrip...     56   5e-008

>TAIR9_protein||AT3G18990.1 | Symbols: VRN1, REM39 | VRN1 (REDUCED VERNALIZATION
        RESPONSE 1); transcription repressor | chr3:6549077-6551568 REVERSE

          Length = 342

 Score =  614 bits (1581), Expect = 7e-176
 Identities = 312/348 (89%), Positives = 321/348 (92%), Gaps = 10/348 (2%)
 Frame = +2

Query:  173 MPRPFFHKLIFSSTIQEKRLRVPDKFASKFKDELSVAVALTVPDGHVWRVGLRKADNNKI 352
            MPRPFFHKLIFSSTIQEKRLRVPDKF SKFKDELSVAVALTVPDGHVWRVGLRKAD NKI
Sbjct:    1 MPRPFFHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKAD-NKI 59

Query:  353 WFQDGWQEFVDRYSIRIGYLLVFRYEGNSAFSVYIYNLSHSEINYHSSGLMDTPHNHLKR 532
            WFQDGWQEFVDRYSIRIGYLL+FRYEGNSAFSVYI+NLSHSEINYHS+GLMD+ HNH KR
Sbjct:   60 WFQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINYHSTGLMDSAHNHFKR 119

Query:  533 ARLFEDLEDEDAAAEVVVYSSSSSVYPPSSHHPGVTVAVNKGYASSSPAIQSFFAGPVKA 712
            ARLFEDLEDED  AEV+     SSVYP  S  P  TV  NKGYASS  AIQ+ F GPVKA
Sbjct:  120 ARLFEDLEDED--AEVIF---PSSVYP--SPLPESTVPANKGYASS--AIQTLFTGPVKA 170

Query:  713 EETTPTPKVAKKRGRKKKNAVPEEINSSAPRDDDPESRSKFYESASARKRTVTAEERERA 892
            EE TPTPK+ KKRGRKKKNA PEEINSSAPRDDDPE+RSKFYESASARKRTVTAEERERA
Sbjct:  171 EEPTPTPKIPKKRGRKKKNADPEEINSSAPRDDDPENRSKFYESASARKRTVTAEERERA 230

Query:  893 INAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLGEKQWPVRC 1072
            INAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQL EKQWPVRC
Sbjct:  231 INAAKTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQWPVRC 290

Query: 1073 LYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAYRVN 1216
            LYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTA+RVN
Sbjct:  291 LYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFRVN 338

>TAIR9_protein||AT1G49480.1 | Symbols: RTV1 | RTV1 (related to vernalization1
        1); DNA binding / transcription factor | chr1:18314596-18315460
        REVERSE

          Length = 227

 Score =  326 bits (834), Expect = 3e-089
 Identities = 166/197 (84%), Positives = 176/197 (89%), Gaps = 5/197 (2%)
 Frame = +2

Query:  626 HPGVTVAVNKGYASSSPAIQSFFAGPVKAEETTPTPKVAKKRGRKKKNAVPEEINSSAPR 805
            +P  T  VNKGY  S+ AIQSFF    KAEE   TPKV KKRGRKKKN  PEE+NSS P 
Sbjct:   32 NPESTEPVNKGYGGST-AIQSFFK-ESKAEE---TPKVLKKRGRKKKNPNPEEVNSSTPG 86

Query:  806 DDDPESRSKFYESASARKRTVTAEERERAINAAKTFEPTNPFFRVVLRPSYLYRGCIMYL 985
             DD E+RSKFYESASARKRTVTAEERERA+NAAKTFEPTNP+FRVVLRPSYLYRGCIMYL
Sbjct:   87 GDDSENRSKFYESASARKRTVTAEERERAVNAAKTFEPTNPYFRVVLRPSYLYRGCIMYL 146

Query:  986 PSGFAEKYLSGISGFIKVQLGEKQWPVRCLYKAGRAKFSQGWYEFTLENNLGEGDVCVFE 1165
            PSGFAEKYLSGISGFIK+QLGEKQWPVRCLYKAGRAKFSQGWYEFTLENN+GEGDVCVFE
Sbjct:  147 PSGFAEKYLSGISGFIKLQLGEKQWPVRCLYKAGRAKFSQGWYEFTLENNIGEGDVCVFE 206

Query: 1166 LLRTRDFVLKVTAYRVN 1216
            LLRTRDFVL+VTA+RVN
Sbjct:  207 LLRTRDFVLEVTAFRVN 223

>TAIR9_protein||AT4G33280.1 | Symbols:  | DNA binding / transcription factor |
        chr4:16047357-16049310 REVERSE

          Length = 338

 Score =  56 bits (134), Expect = 5e-008
 Identities = 28/79 (35%), Positives = 45/79 (56%)
 Frame = +2

Query: 227 RLRVPDKFASKFKDELSVAVALTVPDGHVWRVGLRKADNNKIWFQDGWQEFVDRYSIRIG 406
           RL +P KF++  K +L   V L  P G  + VG+ + D   + F+ GW +FV  +S+   
Sbjct:  36 RLVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKFVKDHSLEEN 95

Query: 407 YLLVFRYEGNSAFSVYIYN 463
            LLVF++ G S F V +++
Sbjct:  96 DLLVFKFHGVSEFEVLVFD 114


 Score =  49 bits (116), Expect = 6e-006
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
 Frame = +2

Query:  866 VTAEERERAINAAK-TFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQ 1042
            ++A   ++A++ AK    P    F V ++ S++   C + +P  +  K +      + +Q
Sbjct:  202 ISAGSNKKALSLAKRAISPDG--FLVFMKRSHVVSKCFLTIPYKWCVKNMLITRQEVVMQ 259

Query: 1043 LGEKQWPVR--CLYKAGRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAYRVN 1216
            + + +W ++       G    S GW +F  +NNL EGDVCVFE   +    L +  Y   
Sbjct:  260 VDQTKWEMKFNIFGARGSGGISTGWKKFVQDNNLREGDVCVFEPANSETKPLHLNVYIFR 319

Query: 1217 G 1219
            G
Sbjct:  320 G 320

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,101,105,717
Number of Sequences: 33410
Number of Extensions: 8101105717
Number of Successful Extensions: 280207306
Number of sequences better than 0.0: 0