BLASTX 7.6.2
Query= UN15504 /QuerySize=839
(838 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G05590.1 | Symbols: RPL18 | RPL18 (RIBOSOMAL P... 360 9e-100
TAIR9_protein||AT5G27850.1 | Symbols: | 60S ribosomal protein L... 350 9e-097
TAIR9_protein||AT2G47570.1 | Symbols: | 60S ribosomal protein L... 213 1e-055
>TAIR9_protein||AT3G05590.1 | Symbols: RPL18 | RPL18 (RIBOSOMAL PROTEIN L18);
structural constituent of ribosome | chr3:1621511-1622775 FORWARD
Length = 188
Score = 360 bits (922), Expect = 9e-100
Identities = 182/188 (96%), Positives = 184/188 (97%)
Frame = -3
Query: 758 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTQSKFNAVILKRLFMSKVNKA 579
MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRT SKFN VILKRLFMSKVNKA
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTNSKFNGVILKRLFMSKVNKA 60
Query: 578 PLSLSRLVEFMAGKEDKIAVLVGTITDDLRVHEIPAIKVTALRFTERARARIEKAGGECL 399
PLSLSRLVEFM GKEDKIAVLVGTITDDLRVHEIPA+KVTALRFTERARARIEKAGGECL
Sbjct: 61 PLSLSRLVEFMTGKEDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120
Query: 398 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFEKARGKR 219
TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVR+KGRKFEKARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRAKGRKFEKARGKR 180
Query: 218 KSRGFKV* 195
KSRGFKV*
Sbjct: 181 KSRGFKV* 188
>TAIR9_protein||AT5G27850.1 | Symbols: | 60S ribosomal protein L18 (RPL18C) |
chr5:9873169-9874297 FORWARD
Length = 188
Score = 350 bits (896), Expect = 9e-097
Identities = 177/188 (94%), Positives = 182/188 (96%)
Frame = -3
Query: 758 MGIDLIAGGKSKKTKRTAPKSDDVYLKLTVKLYRFLVRRTQSKFNAVILKRLFMSKVNKA 579
MGIDLIAGGKSKKTKRTAPKSDDVYLKL VKLYRFLVRR+ S FNAVILKRLFMSKVNKA
Sbjct: 1 MGIDLIAGGKSKKTKRTAPKSDDVYLKLLVKLYRFLVRRSNSNFNAVILKRLFMSKVNKA 60
Query: 578 PLSLSRLVEFMAGKEDKIAVLVGTITDDLRVHEIPAIKVTALRFTERARARIEKAGGECL 399
PLSLSRLVEFM GK+DKIAVLVGTITDDLRVHEIPA+KVTALRFTERARARIEKAGGECL
Sbjct: 61 PLSLSRLVEFMTGKDDKIAVLVGTITDDLRVHEIPAMKVTALRFTERARARIEKAGGECL 120
Query: 398 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRKFEKARGKR 219
TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHS++KPYVR KGRKFEKARGKR
Sbjct: 121 TFDQLALRAPLGQNTVLLRGPKNSREAVKHFGPAPGVPHSNTKPYVRHKGRKFEKARGKR 180
Query: 218 KSRGFKV* 195
KSRGFKV*
Sbjct: 181 KSRGFKV* 188
>TAIR9_protein||AT2G47570.1 | Symbols: | 60S ribosomal protein L18 (RPL18A) |
chr2:19515898-19516717 REVERSE
Length = 136
Score = 213 bits (542), Expect = 1e-055
Identities = 104/136 (76%), Positives = 119/136 (87%), Gaps = 1/136 (0%)
Frame = -3
Query: 599 MSKVNKAPLSLSRLVEFMAGKEDKIAVLVGTITDDLRVHEIPAIKVTALRFTERARARIE 420
MSKVNKAPLSLSRLV +M GK+ KIAV+VGT+TDD+R+ ++PA+ VTALRFTE ARARI
Sbjct: 1 MSKVNKAPLSLSRLVRYMDGKDGKIAVIVGTVTDDVRIEDVPALTVTALRFTESARARIH 60
Query: 419 KAGGECLTFDQLALRAPL-GQNTVLLRGPKNSREAVKHFGPAPGVPHSHSKPYVRSKGRK 243
KAGGECLTFDQLAL P +NTVLLRGPKN+REAVKHFGPAPGVPHSH+KPYVR G+K
Sbjct: 61 KAGGECLTFDQLALPCPTWSENTVLLRGPKNTREAVKHFGPAPGVPHSHTKPYVRQTGKK 120
Query: 242 FEKARGKRKSRGFKV* 195
E ARG+R+SRGFKV*
Sbjct: 121 IEIARGRRRSRGFKV* 136
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,101,105,717
Number of Sequences: 33410
Number of Extensions: 8101105717
Number of Successful Extensions: 280207306
Number of sequences better than 0.0: 0
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