BLASTX 7.6.2
Query= UN15626 /QuerySize=816
(815 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G34480.1 | Symbols: | 60S ribosomal protein L... 359 1e-099
TAIR9_protein||AT3G14600.1 | Symbols: | 60S ribosomal protein L... 341 3e-094
TAIR9_protein||AT1G29965.1 | Symbols: | 60S ribosomal protein L... 341 6e-094
TAIR9_protein||AT1G29970.2 | Symbols: RPL18AA | RPL18AA (60S RIB... 339 2e-093
>TAIR9_protein||AT2G34480.1 | Symbols: | 60S ribosomal protein L18A (RPL18aB) |
chr2:14532916-14534161 REVERSE
Length = 179
Score = 359 bits (921), Expect = 1e-099
Identities = 173/179 (96%), Positives = 177/179 (98%)
Frame = +3
Query: 39 IGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 218
+GAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM
Sbjct: 1 MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 60
Query: 219 LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 398
LAINEI+EKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF
Sbjct: 61 LAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120
Query: 399 PCIQIIKTATVPAKLFKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM* 575
PCIQIIKTATVPAKL KRESTKQFHNSKIKFPLVFRKVRPP+RKLKTTYKA+KPNLFM*
Sbjct: 121 PCIQIIKTATVPAKLCKRESTKQFHNSKIKFPLVFRKVRPPSRKLKTTYKANKPNLFM* 179
>TAIR9_protein||AT3G14600.1 | Symbols: | 60S ribosomal protein L18A (RPL18aC) |
chr3:4910773-4911933 FORWARD
Length = 179
Score = 341 bits (874), Expect = 3e-094
Identities = 164/179 (91%), Positives = 168/179 (93%)
Frame = +3
Query: 39 IGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 218
+G FRFHQYQVVGRALPTE D PKIYRMKLW NEV AKSKFWYF+RKLKKVKKSNGQM
Sbjct: 1 MGGFRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQM 60
Query: 219 LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 398
LAINEIFEKNPTTIKN+GIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYTEMASRHRVRF
Sbjct: 61 LAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRF 120
Query: 399 PCIQIIKTATVPAKLFKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM* 575
PCIQIIKTATVPAKL KRE TKQFHNSKIKFPLVFRKVRPP+RKLKTTYKASKPNLFM*
Sbjct: 121 PCIQIIKTATVPAKLCKREITKQFHNSKIKFPLVFRKVRPPSRKLKTTYKASKPNLFM* 179
>TAIR9_protein||AT1G29965.1 | Symbols: | 60S ribosomal protein L18A (RPL18aA)
| chr1:10498458-10499373 REVERSE
Length = 179
Score = 341 bits (872), Expect = 6e-094
Identities = 164/179 (91%), Positives = 169/179 (94%)
Frame = +3
Query: 39 IGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQM 218
+ R HQYQVVGRALPTEKD QPKIYRMKLWATNEV AKSKFWY+LR+ KKVKKSNGQM
Sbjct: 1 MSVIRLHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKKVKKSNGQM 60
Query: 219 LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 398
LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF
Sbjct: 61 LAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRF 120
Query: 399 PCIQIIKTATVPAKLFKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKASKPNLFM* 575
PCIQIIKTATVPA L KRESTKQFHNSKIKFPLVFRKVRPPTRKLKTT+KA+KPNLFM*
Sbjct: 121 PCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKANKPNLFM* 179
>TAIR9_protein||AT1G29970.2 | Symbols: RPL18AA | RPL18AA (60S RIBOSOMAL PROTEIN
L18A-1); structural constituent of ribosome | chr1:10498458-10501311
REVERSE
Length = 313
Score = 339 bits (868), Expect = 2e-093
Identities = 166/187 (88%), Positives = 172/187 (91%), Gaps = 4/187 (2%)
Frame = +3
Query: 27 YRRKIG----AFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKK 194
+R K G + HQYQVVGRALPTEKD QPKIYRMKLWATNEV AKSKFWY+LR+ KK
Sbjct: 127 HREKAGYVACSIALHQYQVVGRALPTEKDEQPKIYRMKLWATNEVLAKSKFWYYLRRQKK 186
Query: 195 VKKSNGQMLAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEM 374
VKKSNGQMLAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEM
Sbjct: 187 VKKSNGQMLAINEIFEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEM 246
Query: 375 ASRHRVRFPCIQIIKTATVPAKLFKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTYKAS 554
ASRHRVRFPCIQIIKTATVPA L KRESTKQFHNSKIKFPLVFRKVRPPTRKLKTT+KA+
Sbjct: 247 ASRHRVRFPCIQIIKTATVPASLCKRESTKQFHNSKIKFPLVFRKVRPPTRKLKTTFKAN 306
Query: 555 KPNLFM* 575
KPNLFM*
Sbjct: 307 KPNLFM* 313
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,188,306,669
Number of Sequences: 33410
Number of Extensions: 8188306669
Number of Successful Extensions: 285327727
Number of sequences better than 0.0: 0
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