BLASTX 7.6.2
Query= UN15719 /QuerySize=755
(754 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G06680.1 | Symbols: PSBP-1, OEE2, PSII-P, OE23... 380 6e-106
TAIR9_protein||AT2G30790.1 | Symbols: PSBP-2 | PSBP-2 (photosyst... 305 2e-083
TAIR9_protein||AT1G06680.2 | Symbols: PSBP-1, OEE2, PSII-P | PSB... 234 7e-062
>TAIR9_protein||AT1G06680.1 | Symbols: PSBP-1, OEE2, PSII-P, OE23 | PSBP-1
(PHOTOSYSTEM II SUBUNIT P-1); poly(U) binding | chr1:2047940-2049186
FORWARD
Length = 264
Score = 380 bits (975), Expect = 6e-106
Identities = 189/210 (90%), Positives = 202/210 (96%)
Frame = +2
Query: 53 MAYSACFLHQSALASAATRSSSSSSSQRYVSLSKPVQVVCKAQQAHEDDNSAVSRRLALT 232
MAYSACFLHQSALAS+A RSSSSSSSQR+VSLSKPVQ++CKAQQ+HEDDNSAVSRRLALT
Sbjct: 1 MAYSACFLHQSALASSAARSSSSSSSQRHVSLSKPVQIICKAQQSHEDDNSAVSRRLALT 60
Query: 233 LLVGAAAVGSKVSPADAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSRGVEYP 412
LLVGAAAVGSKVSPADAAYGEAANVFGKPK NTDF Y+GDGF+VQVPAKWNPS+ +EYP
Sbjct: 61 LLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIEYP 120
Query: 413 GQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSLEEFLSQVNCLLGKQAYFGETASEGGF 592
GQVLR+EDNFDATSNLNVMVTPTDKKSITDYGS EEFLSQVN LLGKQAYFGETASEGGF
Sbjct: 121 GQVLRFEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGF 180
Query: 593 DNNAVATANILETNVQDVGGKPYYYLSVLT 682
DNNAVATANILE++ Q+VGGKPYYYLSVLT
Sbjct: 181 DNNAVATANILESSSQEVGGKPYYYLSVLT 210
>TAIR9_protein||AT2G30790.1 | Symbols: PSBP-2 | PSBP-2 (photosystem II subunit
P-2); calcium ion binding | chr2:13119047-13120090 REVERSE
Length = 262
Score = 305 bits (780), Expect = 2e-083
Identities = 156/211 (73%), Positives = 182/211 (86%), Gaps = 4/211 (1%)
Frame = +2
Query: 53 MAYSACFLHQSALASAATRSSSSSSSQ-RYVSLSKPVQVVCKAQQAHEDDNSAVSRRLAL 229
MAYS FLHQSALAS+A RSSSSSSS R+VSLS+PV +VC+AQQ+ E++NSAV RRLAL
Sbjct: 1 MAYSPSFLHQSALASSAGRSSSSSSSSFRHVSLSRPVHLVCRAQQSQENNNSAVFRRLAL 60
Query: 230 TLLVGAAAVGSKVSPADAAYGEAANVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSRGVEY 409
TLLVGAAA+GSKVSPA + PKKNTDF Y+G+GF++Q+P+KWNPS+ +EY
Sbjct: 61 TLLVGAAAIGSKVSPAPPM---VKPLMCLPKKNTDFLPYTGEGFKIQIPSKWNPSKEIEY 117
Query: 410 PGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSLEEFLSQVNCLLGKQAYFGETASEGG 589
PGQVLR+EDNFDATSN++VM+TPTDKKSITDYGS E+FLSQVN LLGKQAY GETASEGG
Sbjct: 118 PGQVLRFEDNFDATSNVSVMITPTDKKSITDYGSPEQFLSQVNYLLGKQAYVGETASEGG 177
Query: 590 FDNNAVATANILETNVQDVGGKPYYYLSVLT 682
FD NAVATANILET+ Q++GGK YYYLSVLT
Sbjct: 178 FDANAVATANILETSTQEIGGKEYYYLSVLT 208
>TAIR9_protein||AT1G06680.2 | Symbols: PSBP-1, OEE2, PSII-P | PSBP-1
(PHOTOSYSTEM II SUBUNIT P-1); poly(U) binding | chr1:2048076-2049186
FORWARD
Length = 220
Score = 234 bits (595), Expect = 7e-062
Identities = 112/127 (88%), Positives = 120/127 (94%)
Frame = +2
Query: 302 NVFGKPKKNTDFTAYSGDGFQVQVPAKWNPSRGVEYPGQVLRYEDNFDATSNLNVMVTPT 481
NVFGKPK NTDF Y+GDGF+VQVPAKWNPS+ +EYPGQVLR+EDNFDATSNLNVMVTPT
Sbjct: 40 NVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIEYPGQVLRFEDNFDATSNLNVMVTPT 99
Query: 482 DKKSITDYGSLEEFLSQVNCLLGKQAYFGETASEGGFDNNAVATANILETNVQDVGGKPY 661
DKKSITDYGS EEFLSQVN LLGKQAYFGETASEGGFDNNAVATANILE++ Q+VGGKPY
Sbjct: 100 DKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANILESSSQEVGGKPY 159
Query: 662 YYLSVLT 682
YYLSVLT
Sbjct: 160 YYLSVLT 166
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,188,306,669
Number of Sequences: 33410
Number of Extensions: 8188306669
Number of Successful Extensions: 285327727
Number of sequences better than 0.0: 0
|
