BLASTX 7.6.2
Query= UN15729 /QuerySize=795
(794 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G65260.1 | Symbols: | polyadenylate-binding p... 390 6e-109
TAIR9_protein||AT5G10350.1 | Symbols: | polyadenylate-binding p... 340 7e-094
TAIR9_protein||AT5G10350.2 | Symbols: | polyadenylate-binding p... 309 2e-084
TAIR9_protein||AT5G51120.1 | Symbols: PABN1, ATPABN1 | PABN1 (PO... 267 6e-072
TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding... 54 1e-007
TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine... 51 6e-007
>TAIR9_protein||AT5G65260.1 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:26080501-26082984 REVERSE
Length = 221
Score = 390 bits (1001), Expect = 6e-109
Identities = 192/221 (86%), Positives = 202/221 (91%), Gaps = 9/221 (4%)
Frame = +3
Query: 24 MEEEEHEVYGGEIPDVGEMDGDM-------DMTAADDDAAKELDEMKKRLKEIEDEAAAL 182
MEEEEHEVYGGEIPDVGEMDGDM DM AADDDA KELDEMKKRLKE+EDEAAAL
Sbjct: 1 MEEEEHEVYGGEIPDVGEMDGDMEALNPDLDMAAADDDAVKELDEMKKRLKEMEDEAAAL 60
Query: 183 REMQAKVEKDMGPQDAGTVAADQAGEEEVDARSVFVGNVDYACTPEEVQQHFQSCGTVHR 362
REMQAKVEK+MG QD ++AA+QAG+EEVDARSVFVGNVDYACTPEEVQQHFQ+CGTVHR
Sbjct: 61 REMQAKVEKEMGAQDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHR 120
Query: 363 VTILTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKVMPKRTNVPGLKQFRGRR 542
VTILTDKFGQPKGFAYVEFVE EA+QEALQLNESELHGRQ+KV+ KRTNVPGLKQFRGRR
Sbjct: 121 VTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQFRGRR 180
Query: 543 FNPYMG--FRRPFMSLYMYSPYGYGKVPRFRRPMRYMPYQ* 659
FNPYMG FRRPFMS YMYSPYGYGK PRFRRPMRYMPYQ*
Sbjct: 181 FNPYMGYRFRRPFMSPYMYSPYGYGKAPRFRRPMRYMPYQ* 221
>TAIR9_protein||AT5G10350.1 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:3255674-3257746 REVERSE
Length = 218
Score = 340 bits (871), Expect = 7e-094
Identities = 169/218 (77%), Positives = 190/218 (87%), Gaps = 6/218 (2%)
Frame = +3
Query: 24 MEEEEHEVYGGEIPDVGEM---DGDMDMTAADDDAAKELDEMKKRLKEIEDEAAALREMQ 194
MEEEEHEVYGGEIP+VG+ D D+DM+AAD+DA EL EMK+RLKE+E+EAAALREMQ
Sbjct: 1 MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60
Query: 195 AKVEKDMG-PQDAGTVAADQAGEEEVDARSVFVGNVDYACTPEEVQQHFQSCGTVHRVTI 371
AKVEK+MG QD ++AA+Q G+EEVDARSV+VGNVDYACTPEEVQ HFQ+CGTV+RVTI
Sbjct: 61 AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120
Query: 372 LTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKVMPKRTNVPGLKQFRGRRFNP 551
L DKFGQPKGFAYVEFVE EA+QEALQLNESELHGRQ+KV PKRTNVPG+KQ+ RFNP
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNP 180
Query: 552 YMG--FRRPFMSLYMYSPYGYGKVPRFRRPMRYMPYQ* 659
MG FRRPF+ Y YSPYGYGK PRFRRPMRYMPYQ*
Sbjct: 181 SMGYRFRRPFVPPYFYSPYGYGKAPRFRRPMRYMPYQ* 218
>TAIR9_protein||AT5G10350.2 | Symbols: | polyadenylate-binding protein family
protein / PABP family protein | chr5:3255808-3257746 REVERSE
Length = 203
Score = 309 bits (789), Expect = 2e-084
Identities = 155/202 (76%), Positives = 176/202 (87%), Gaps = 6/202 (2%)
Frame = +3
Query: 24 MEEEEHEVYGGEIPDVGEM---DGDMDMTAADDDAAKELDEMKKRLKEIEDEAAALREMQ 194
MEEEEHEVYGGEIP+VG+ D D+DM+AAD+DA EL EMK+RLKE+E+EAAALREMQ
Sbjct: 1 MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60
Query: 195 AKVEKDMG-PQDAGTVAADQAGEEEVDARSVFVGNVDYACTPEEVQQHFQSCGTVHRVTI 371
AKVEK+MG QD ++AA+Q G+EEVDARSV+VGNVDYACTPEEVQ HFQ+CGTV+RVTI
Sbjct: 61 AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120
Query: 372 LTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKVMPKRTNVPGLKQFRGRRFNP 551
L DKFGQPKGFAYVEFVE EA+QEALQLNESELHGRQ+KV PKRTNVPG+KQ+ RFNP
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVSPKRTNVPGMKQYHPGRFNP 180
Query: 552 YMG--FRRPFMSLYMYSPYGYG 611
MG FRRPF+ Y YSPYGYG
Sbjct: 181 SMGYRFRRPFVPPYFYSPYGYG 202
>TAIR9_protein||AT5G51120.1 | Symbols: PABN1, ATPABN1 | PABN1
(POLYADENYLATE-BINDING PROTEIN 1); RNA binding / poly(A) binding /
protein binding | chr5:20779760-20781241 FORWARD
Length = 228
Score = 267 bits (682), Expect = 6e-072
Identities = 138/218 (63%), Positives = 163/218 (74%), Gaps = 10/218 (4%)
Frame = +3
Query: 6 EREREAMEEEEHEVYGGEIPDVGEMDGDMDMTAADDDAAKELDEMKKRLKEIEDEAAALR 185
E E M+ EE+E +GGE G GD ++ ++++L++MKKR+KEIE+EA ALR
Sbjct: 18 EEEEGEMDTEEYEEHGGE---EGAAAGDEELEPG--SSSRDLEDMKKRIKEIEEEAGALR 72
Query: 186 EMQAKVEKDMGPQDAGTVAADQAGEEEVDARSVFVGNVDYACTPEEVQQHFQSCGTVHRV 365
EMQAK EKDMG + A +EEVD+RS++VGNVDYACTPEEVQQHFQSCGTV+RV
Sbjct: 73 EMQAKAEKDMGASQDPSGGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRV 132
Query: 366 TILTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKVMPKRTNVPGLKQF--RGR 539
TILTDKFGQPKGFAYVEFVE EA+Q +L LNESELHGRQIKV KRTNVPG++QF RGR
Sbjct: 133 TILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKVSAKRTNVPGMRQFRGRGR 192
Query: 540 RFNPYMGFRRPFMSLYMYSPYGYGKVPRFRRPMRYMPY 653
F P GF + Y PY YG+VPRFRRPMRY PY
Sbjct: 193 PFRPMRGF---MPGVPFYPPYAYGRVPRFRRPMRYRPY 227
>TAIR9_protein||AT3G55460.1 | Symbols: SCL30 | SCL30; RNA binding / nucleic acid
binding / nucleotide binding | chr3:20561024-20563502 FORWARD
Length = 263
Score = 54 bits (127), Expect = 1e-007
Identities = 31/74 (41%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Frame = +3
Query: 279 SVFVGNVDYACTPEEVQQHFQSCGTVHRVTILTDKF-GQPKGFAYVEFVEAEAIQEALQ- 452
S+ V N+ C PEE+++ F+ G V V I D + GQP+GFA+VEFV+A EA +
Sbjct: 48 SLLVRNIPLDCRPEELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRS 107
Query: 453 LNESELHGRQIKVM 494
+N GR+I V+
Sbjct: 108 MNRRSFAGREITVV 121
>TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine-rich
RNA-binding protein 5); ATP binding / RNA binding |
chr1:27915346-27916857 FORWARD
Length = 290
Score = 51 bits (121), Expect = 6e-007
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Frame = +3
Query: 267 VDARSVFVGNVDYACTPEEVQQHFQSCGTVHRVTILTDK-FGQPKGFAYVEFVEAEAIQE 443
+ + +FVG + Y+ +++ F G V I+ D+ G+ +GFA+V F E
Sbjct: 31 MSSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASN 90
Query: 444 ALQLNESELHGRQIKV 491
A+QL+ +LHGR+I+V
Sbjct: 91 AMQLDGQDLHGRRIRV 106
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,188,306,669
Number of Sequences: 33410
Number of Extensions: 8188306669
Number of Successful Extensions: 285327727
Number of sequences better than 0.0: 0
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