BLASTX 7.6.2
Query= UN15811 /QuerySize=1173
(1172 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15241461|ref|NP_196970.1| peptide deformylase 1B [Arabidopsis... 477 2e-132
gi|297811599|ref|XP_002873683.1| predicted protein [Arabidopsis ... 476 4e-132
gi|21553551|gb|AAM62644.1| Formylmethionine deformylase [Arabido... 475 6e-132
gi|11320966|gb|AAG33980.1|AF269165_1 peptide deformylase [Arabid... 475 8e-132
gi|194368702|pdb|3CPM|A Chain A, Plant Peptide Deformylase Pdf1b... 357 2e-096
gi|327200558|pdb|3M6O|A Chain A, Crystal Structure Of Arabidopsi... 357 3e-096
gi|327200562|pdb|3M6Q|A Chain A, Crystal Structure Of Arabidopsi... 354 3e-095
gi|327200563|pdb|3M6R|A Chain A, Crystal Structure Of Arabidopsi... 353 4e-095
gi|255560876|ref|XP_002521451.1| polypeptide deformylase, putati... 352 1e-094
gi|224060121|ref|XP_002300047.1| peptide deformylase [Populus tr... 334 2e-089
gi|225452422|ref|XP_002276964.1| PREDICTED: hypothetical protein... 331 1e-088
gi|17433052|sp|Q9FV54.1|DEF1B_SOLLC RecName: Full=Peptide deform... 330 2e-088
gi|115438779|ref|NP_001043669.1| Os01g0637600 [Oryza sativa Japo... 288 1e-075
gi|242058133|ref|XP_002458212.1| hypothetical protein SORBIDRAFT... 286 5e-075
gi|326511653|dbj|BAJ91971.1| predicted protein [Hordeum vulgare ... 282 1e-073
gi|222618926|gb|EEE55058.1| hypothetical protein OsJ_02762 [Oryz... 278 1e-072
gi|218188726|gb|EEC71153.1| hypothetical protein OsI_02992 [Oryz... 278 2e-072
gi|222618921|gb|EEE55053.1| hypothetical protein OsJ_02752 [Oryz... 276 7e-072
gi|116787193|gb|ABK24406.1| unknown [Picea sitchensis] 265 2e-068
gi|255630300|gb|ACU15506.1| unknown [Glycine max] 233 4e-059
>gi|15241461|ref|NP_196970.1| peptide deformylase 1B [Arabidopsis thaliana]
Length = 273
Score = 477 bits (1227), Expect = 2e-132
Identities = 242/273 (88%), Positives = 254/273 (93%), Gaps = 3/273 (1%)
Frame = +1
Query: 58 CNCFLQAPPLSRFLSPVLSRRATNLFAGYGRLKSTVMFSSSSSAANRTGPLTSPVRAEVK 237
CNCFLQAPPLSR L PVLSRRAT L AGYGRLKSTV F S+ NRT PLTS VRAEVK
Sbjct: 4 CNCFLQAPPLSRILLPVLSRRATTLSAGYGRLKSTVTFCST---VNRTSPLTSSVRAEVK 60
Query: 238 RVSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTD 417
RVSRKDD+VASA+D+QFETPLKIVEYPDPILRAK KRI +FDENLKNL DAMFDVMYKTD
Sbjct: 61 RVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTD 120
Query: 418 GIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYAD 597
GIGLSAPQVGLNVQLMVFNPAGE GEG+EIVLVNPKI KYSDKLVPF+EGCLSFPGIYA+
Sbjct: 121 GIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAE 180
Query: 598 VVRPQSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELE 777
VVRPQSVKIDARDITG RFSISLSRLPARIFQHEYDHLEGVLFFDRMTD VLD+IREELE
Sbjct: 181 VVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELE 240
Query: 778 ALEKKYEEKTGLPSPEKVQARQKKKAGVGFGKR 876
ALEKKYEEKTGLPSPE+V+ARQK+KAGVGFGKR
Sbjct: 241 ALEKKYEEKTGLPSPERVEARQKRKAGVGFGKR 273
>gi|297811599|ref|XP_002873683.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 273
Score = 476 bits (1224), Expect = 4e-132
Identities = 242/273 (88%), Positives = 252/273 (92%), Gaps = 3/273 (1%)
Frame = +1
Query: 58 CNCFLQAPPLSRFLSPVLSRRATNLFAGYGRLKSTVMFSSSSSAANRTGPLTSPVRAEVK 237
CNCFLQAPPLSR PVLSRRAT L AGYGRLKSTVMF S+ NRT PL SPVRAEVK
Sbjct: 4 CNCFLQAPPLSRLFLPVLSRRATTLSAGYGRLKSTVMFCST---GNRTSPLISPVRAEVK 60
Query: 238 RVSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTD 417
RVSRKD +VASASDLQFETPL+IVEYPDPILRAK KRIGVFD+NLKNL DAMFDVMYKTD
Sbjct: 61 RVSRKDVEVASASDLQFETPLRIVEYPDPILRAKNKRIGVFDQNLKNLVDAMFDVMYKTD 120
Query: 418 GIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYAD 597
GIGLSAPQVGLNVQLMVFNPAGE GEGEEIVLVNP I KYSDKLVPF+EGCLSFPGIYA+
Sbjct: 121 GIGLSAPQVGLNVQLMVFNPAGEPGEGEEIVLVNPIIKKYSDKLVPFDEGCLSFPGIYAE 180
Query: 598 VVRPQSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELE 777
VVRPQSVKIDARDITG RFSISLSRLPARIFQHEYDHLEGVLFFDRMTD VLD+IREELE
Sbjct: 181 VVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELE 240
Query: 778 ALEKKYEEKTGLPSPEKVQARQKKKAGVGFGKR 876
ALEKKYEEKTGLPSPE++QAR K+KAGVGFGKR
Sbjct: 241 ALEKKYEEKTGLPSPERIQARHKRKAGVGFGKR 273
>gi|21553551|gb|AAM62644.1| Formylmethionine deformylase [Arabidopsis thaliana]
Length = 273
Score = 475 bits (1222), Expect = 6e-132
Identities = 241/273 (88%), Positives = 253/273 (92%), Gaps = 3/273 (1%)
Frame = +1
Query: 58 CNCFLQAPPLSRFLSPVLSRRATNLFAGYGRLKSTVMFSSSSSAANRTGPLTSPVRAEVK 237
CNCFLQAPPLSR L PVLSRRAT L AGYGRLKSTV F S+ NR PLTS VRAEVK
Sbjct: 4 CNCFLQAPPLSRILLPVLSRRATTLSAGYGRLKSTVTFCST---VNRNSPLTSSVRAEVK 60
Query: 238 RVSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTD 417
RVSRKDD+VASA+D+QFETPLKIVEYPDPILRAK KRI +FDENLKNL DAMFDVMYKTD
Sbjct: 61 RVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTD 120
Query: 418 GIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYAD 597
GIGLSAPQVGLNVQLMVFNPAGE GEG+EIVLVNPKI KYSDKLVPF+EGCLSFPGIYA+
Sbjct: 121 GIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAE 180
Query: 598 VVRPQSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELE 777
VVRPQSVKIDARDITG RFSISLSRLPARIFQHEYDHLEGVLFFDRMTD VLD+IREELE
Sbjct: 181 VVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELE 240
Query: 778 ALEKKYEEKTGLPSPEKVQARQKKKAGVGFGKR 876
ALEKKYEEKTGLPSPE+V+ARQK+KAGVGFGKR
Sbjct: 241 ALEKKYEEKTGLPSPERVEARQKRKAGVGFGKR 273
>gi|11320966|gb|AAG33980.1|AF269165_1 peptide deformylase [Arabidopsis
thaliana]
Length = 273
Score = 475 bits (1221), Expect = 8e-132
Identities = 241/273 (88%), Positives = 253/273 (92%), Gaps = 3/273 (1%)
Frame = +1
Query: 58 CNCFLQAPPLSRFLSPVLSRRATNLFAGYGRLKSTVMFSSSSSAANRTGPLTSPVRAEVK 237
CNCFLQAPPLSR L PVLSRRAT L AGYGRLKSTV F S+ NRT PLTS VRAEVK
Sbjct: 4 CNCFLQAPPLSRILLPVLSRRATTLSAGYGRLKSTVTFCST---VNRTSPLTSSVRAEVK 60
Query: 238 RVSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTD 417
RVSRKDD+VASA+D+QFETPLKIVEYPDPILRAK KRI +FDENLKNL DAMFDVMYKTD
Sbjct: 61 RVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTD 120
Query: 418 GIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYAD 597
GIGLSAPQVGLNVQLMVFNPAGE GEG+EIVLVNPKI KYSDKLVPF+EGCLSFPGIYA+
Sbjct: 121 GIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAE 180
Query: 598 VVRPQSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELE 777
VVRPQSVKIDARDITG RFSISLS LPARIFQHEYDHLEGVLFFDRMTD VLD+IREELE
Sbjct: 181 VVRPQSVKIDARDITGERFSISLSSLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELE 240
Query: 778 ALEKKYEEKTGLPSPEKVQARQKKKAGVGFGKR 876
ALEKKYEEKTGLPSPE+V+ARQK+KAGVGFGKR
Sbjct: 241 ALEKKYEEKTGLPSPERVEARQKRKAGVGFGKR 273
>gi|194368702|pdb|3CPM|A Chain A, Plant Peptide Deformylase Pdf1b Crystal
Structure
Length = 193
Score = 357 bits (916), Expect = 2e-096
Identities = 177/193 (91%), Positives = 186/193 (96%)
Frame = +1
Query: 250 KDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTDGIGL 429
KDD+VASA+D+QFETPLKIVEYPDPILRAK KRI +FDENLKNL DAMFDVMYKTDGIGL
Sbjct: 1 KDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGL 60
Query: 430 SAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRP 609
SAPQVGLNVQLMVFNPAGE GEG+EIVLVNPKI KYSDKLVPF+EGCLSFPGIYA+VVRP
Sbjct: 61 SAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRP 120
Query: 610 QSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEK 789
QSVKIDARDITG RFSISLSRLPARIFQHEYDHLEGVLFFDRMTD VLD+IREELEALEK
Sbjct: 121 QSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEK 180
Query: 790 KYEEKTGLPSPEK 828
KYEEKTGLPSPE+
Sbjct: 181 KYEEKTGLPSPER 193
>gi|327200558|pdb|3M6O|A Chain A, Crystal Structure Of Arabidopsis Thaliana
Peptide Deformylase 1b (Atpdf1b)
Length = 193
Score = 357 bits (914), Expect = 3e-096
Identities = 176/193 (91%), Positives = 186/193 (96%)
Frame = +1
Query: 298 LKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 477
++IVEYPDPILRAK KRI +FDENLKNL DAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP
Sbjct: 1 MEIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 60
Query: 478 AGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGARFS 657
AGE GEG+EIVLVNPKI KYSDKLVPF+EGCLSFPGIYA+VVRPQSVKIDARDITG RFS
Sbjct: 61 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFS 120
Query: 658 ISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEKKYEEKTGLPSPEKVQA 837
ISLSRLPARIFQHEYDHLEGVLFFDRMTD VLD+IREELEALEKKYEEKTGLPSPE+V+A
Sbjct: 121 ISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKKYEEKTGLPSPERVEA 180
Query: 838 RQKKKAGVGFGKR 876
RQK+KAGVGFGKR
Sbjct: 181 RQKRKAGVGFGKR 193
>gi|327200562|pdb|3M6Q|A Chain A, Crystal Structure Of Arabidopsis Thaliana
Peptide Deformylase 1b (Atpdf1b) G41q Mutant In Complex With Actinonin
Length = 193
Score = 354 bits (906), Expect = 3e-095
Identities = 175/193 (90%), Positives = 185/193 (95%)
Frame = +1
Query: 298 LKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 477
++IVEYPDPILRAK KRI +FDENLKNL DAMFDVMYKTD IGLSAPQVGLNVQLMVFNP
Sbjct: 1 MEIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDQIGLSAPQVGLNVQLMVFNP 60
Query: 478 AGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGARFS 657
AGE GEG+EIVLVNPKI KYSDKLVPF+EGCLSFPGIYA+VVRPQSVKIDARDITG RFS
Sbjct: 61 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFS 120
Query: 658 ISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEKKYEEKTGLPSPEKVQA 837
ISLSRLPARIFQHEYDHLEGVLFFDRMTD VLD+IREELEALEKKYEEKTGLPSPE+V+A
Sbjct: 121 ISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKKYEEKTGLPSPERVEA 180
Query: 838 RQKKKAGVGFGKR 876
RQK+KAGVGFGKR
Sbjct: 181 RQKRKAGVGFGKR 193
>gi|327200563|pdb|3M6R|A Chain A, Crystal Structure Of Arabidopsis Thaliana
Peptide Deformylase 1b (Atpdf1b) G41m Mutant In Complex With Actinonin
Length = 193
Score = 353 bits (905), Expect = 4e-095
Identities = 175/193 (90%), Positives = 185/193 (95%)
Frame = +1
Query: 298 LKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 477
++IVEYPDPILRAK KRI +FDENLKNL DAMFDVMYKTD IGLSAPQVGLNVQLMVFNP
Sbjct: 1 MEIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTDMIGLSAPQVGLNVQLMVFNP 60
Query: 478 AGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGARFS 657
AGE GEG+EIVLVNPKI KYSDKLVPF+EGCLSFPGIYA+VVRPQSVKIDARDITG RFS
Sbjct: 61 AGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAEVVRPQSVKIDARDITGERFS 120
Query: 658 ISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEKKYEEKTGLPSPEKVQA 837
ISLSRLPARIFQHEYDHLEGVLFFDRMTD VLD+IREELEALEKKYEEKTGLPSPE+V+A
Sbjct: 121 ISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELEALEKKYEEKTGLPSPERVEA 180
Query: 838 RQKKKAGVGFGKR 876
RQK+KAGVGFGKR
Sbjct: 181 RQKRKAGVGFGKR 193
>gi|255560876|ref|XP_002521451.1| polypeptide deformylase, putative [Ricinus
communis]
Length = 282
Score = 352 bits (901), Expect = 1e-094
Identities = 179/263 (68%), Positives = 214/263 (81%), Gaps = 11/263 (4%)
Frame = +1
Query: 97 LSPVLSRR---ATNLFAGYGRLKSTVMFSSSSSAANRTGPLTSPVRAEVKR-VSRKDDQV 264
L PVL R+ + N F + +L ST FSS + P + PVRA+ KR S K++++
Sbjct: 26 LLPVLFRQTGFSCNNFR-FNQLSSTARFSSIAK------PPSIPVRAQAKRSFSFKEEEI 78
Query: 265 ASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTDGIGLSAPQV 444
A+ +DL FE PLKIVEYPDPILR K KRI FD+NLK L D MFDVMYKTDGIGLSAPQV
Sbjct: 79 ATPADLCFEEPLKIVEYPDPILRRKNKRIDTFDDNLKKLVDEMFDVMYKTDGIGLSAPQV 138
Query: 445 GLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKI 624
G+NVQLMVFNP GE GEGEEIVL+NP++NKYS K+VPFNEGCLSFPGIYADV+RP+SVKI
Sbjct: 139 GINVQLMVFNPVGERGEGEEIVLINPRLNKYSKKIVPFNEGCLSFPGIYADVLRPESVKI 198
Query: 625 DARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEKKYEEK 804
DARDI GARF+++LS LPAR+FQHEYDHLEG+LFFDRMTD+VLD+IR +L+ALEKK+E+K
Sbjct: 199 DARDINGARFTVNLSGLPARVFQHEYDHLEGILFFDRMTDEVLDSIRAQLQALEKKFEDK 258
Query: 805 TGLPSPEKVQARQKKKAGVGFGK 873
TG SPEK++ R+ KKA GFGK
Sbjct: 259 TGYASPEKIETRKTKKAAAGFGK 281
>gi|224060121|ref|XP_002300047.1| peptide deformylase [Populus trichocarpa]
Length = 258
Score = 334 bits (855), Expect = 2e-089
Identities = 165/232 (71%), Positives = 193/232 (83%), Gaps = 1/232 (0%)
Frame = +1
Query: 181 SSAANRTGPLTSPVRAEVKR-VSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGV 357
SS + P + VR++ KR K DQVA+ SDL+FE PLKIVEYPDPILRAK KRI
Sbjct: 27 SSTMKQPRPPSLFVRSQAKRGPFLKQDQVAATSDLEFEAPLKIVEYPDPILRAKNKRIDS 86
Query: 358 FDENLKNLADAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKY 537
FD+NLK L D MFDVMYKTDGIGLSAPQVG+NVQLMVFNPA E GEG+EIVLVNP++NKY
Sbjct: 87 FDDNLKKLVDEMFDVMYKTDGIGLSAPQVGINVQLMVFNPADEHGEGDEIVLVNPRVNKY 146
Query: 538 SDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGARFSISLSRLPARIFQHEYDHLEG 717
S K V FNEGCLSFPGIYADV RP+SVKIDARDI GARF+++LS LPAR+FQHE+DHL+G
Sbjct: 147 SKKTVLFNEGCLSFPGIYADVKRPESVKIDARDINGARFTVNLSGLPARVFQHEFDHLQG 206
Query: 718 VLFFDRMTDDVLDTIREELEALEKKYEEKTGLPSPEKVQARQKKKAGVGFGK 873
+LFFDRMT++VLD+IR L+ALEKKYE+KTG PSPE+++ + KK GFGK
Sbjct: 207 ILFFDRMTEEVLDSIRPGLQALEKKYEDKTGFPSPERIETHRLKKVAAGFGK 258
>gi|225452422|ref|XP_002276964.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 275
Score = 331 bits (848), Expect = 1e-088
Identities = 170/269 (63%), Positives = 203/269 (75%), Gaps = 2/269 (0%)
Frame = +1
Query: 70 LQAPPLSRFLSPVLSRRATNLFAGYGRLKSTVMFSSSSSAANRTGPLTSPVRAEVKR-VS 246
L + LS P+L R+ L L S S+ANR V+ + KR S
Sbjct: 7 LHSSYLSNTFLPILRHRSA-LSTSTSHLHRFCSPSRFFSSANRFRLPLMQVQVQAKRGFS 65
Query: 247 RKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTDGIG 426
K++ +AS +DL FE PLKIVEYPDPILRAK K I FD+NLK L D MFDVMYKTDGIG
Sbjct: 66 FKEEVIASPADLSFEAPLKIVEYPDPILRAKNKLISTFDDNLKKLVDEMFDVMYKTDGIG 125
Query: 427 LSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVR 606
LSAPQVG+NVQLMVFNP GE GEGEEIVLVNP++NKYS K+V FNEGCLSFPGIYADV R
Sbjct: 126 LSAPQVGINVQLMVFNPVGERGEGEEIVLVNPRVNKYSKKIVLFNEGCLSFPGIYADVER 185
Query: 607 PQSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALE 786
P+SVKIDARDITGARF I+LS LPAR+FQHE+DHL+G LFFDRMT++VLD+I L+ LE
Sbjct: 186 PESVKIDARDITGARFMINLSGLPARVFQHEFDHLQGTLFFDRMTEEVLDSIHANLQDLE 245
Query: 787 KKYEEKTGLPSPEKVQARQKKKAGVGFGK 873
+KYE++TG PSPE+++ R+++K GFGK
Sbjct: 246 RKYEDRTGFPSPERIETRKRRKVAAGFGK 274
>gi|17433052|sp|Q9FV54.1|DEF1B_SOLLC RecName: Full=Peptide deformylase 1B,
chloroplastic; Short=PDF 1B; AltName: Full=Polypeptide deformylase;
Flags: Precursor
Length = 279
Score = 330 bits (846), Expect = 2e-088
Identities = 172/283 (60%), Positives = 212/283 (74%), Gaps = 12/283 (4%)
Frame = +1
Query: 46 MASVCNCFLQAPPLSRFLSPVLSRRATNLFAGYG--RLKST--VMFSSSSSAANRTGPLT 213
MA + + +RFL P+LSR ++ Y R KS + FS+SS+ P
Sbjct: 1 MAMAAASWASSSSFTRFLRPLLSRNSSPSPISYSLHRYKSANCLFFSASSNK-----PPK 55
Query: 214 SPVRAEVKRV---SRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLA 384
V A+ +RV K D++A+ +DL F PLKIVEYPDPILRAK KRI FD NLK L
Sbjct: 56 LAVYAQARRVLSSKTKGDEIATPADLSFVVPLKIVEYPDPILRAKNKRIDNFDANLKKLV 115
Query: 385 DAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNE 564
D MFD+MYKTDGIGLSAPQVG+NVQLMVFN AGE GEGEEIVLVNP++++YS +++P+ E
Sbjct: 116 DEMFDIMYKTDGIGLSAPQVGMNVQLMVFNAAGERGEGEEIVLVNPRVSRYSRRIIPYEE 175
Query: 565 GCLSFPGIYADVVRPQSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTD 744
GCLSFP I+ DV RP+SVK+DA+DI G RF ISLS LPAR+FQHE+DHL+GVLFFD+MTD
Sbjct: 176 GCLSFPMIHGDVKRPESVKVDAQDINGTRFEISLSALPARVFQHEFDHLQGVLFFDKMTD 235
Query: 745 DVLDTIREELEALEKKYEEKTGLPSPEKVQARQKKKAGVGFGK 873
+VLDTIRE+L ALEKKYE++TGLP+PE + R+ KKA VGFGK
Sbjct: 236 EVLDTIREKLVALEKKYEDRTGLPTPESINTRKIKKAAVGFGK 278
>gi|115438779|ref|NP_001043669.1| Os01g0637600 [Oryza sativa Japonica Group]
Length = 269
Score = 288 bits (736), Expect = 1e-075
Identities = 137/208 (65%), Positives = 173/208 (83%)
Frame = +1
Query: 250 KDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTDGIGL 429
+D+ A+A+DLQFE PLK+V+YPDPILRA+ KRI FD+NL++L D MFDVMYKTDGIGL
Sbjct: 62 EDEDFATAADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGL 121
Query: 430 SAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRP 609
SAPQVG+NVQLMVFNPAG GEGEEIVLVNP + K S +L+ + EGCLSFPGIYA+VVRP
Sbjct: 122 SAPQVGVNVQLMVFNPAGVKGEGEEIVLVNPVVYKMSKRLLVYEEGCLSFPGIYANVVRP 181
Query: 610 QSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEK 789
+VKIDA+D+TGA+ + LS L AR+FQHE+DHL+G+LFFDRM+ DVL+++RE L+ LEK
Sbjct: 182 DNVKIDAQDVTGAKIKVKLSGLSARVFQHEFDHLQGILFFDRMSLDVLESVREGLKDLEK 241
Query: 790 KYEEKTGLPSPEKVQARQKKKAGVGFGK 873
KYEE TGL SPE ++ + +K + F +
Sbjct: 242 KYEESTGLVSPESIENYKGRKDLISFSR 269
>gi|242058133|ref|XP_002458212.1| hypothetical protein SORBIDRAFT_03g029040
[Sorghum bicolor]
Length = 264
Score = 286 bits (731), Expect = 5e-075
Identities = 138/206 (66%), Positives = 171/206 (83%)
Frame = +1
Query: 256 DQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTDGIGLSA 435
+ A+A+DL+FE+PL++V+YPDPILRA+ KRI FD NL+ LAD MFDVMYKTDGIGLSA
Sbjct: 59 EDFATATDLRFESPLEVVKYPDPILRARNKRINAFDANLRALADEMFDVMYKTDGIGLSA 118
Query: 436 PQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQS 615
PQVG+NVQLMVFNPAG GEGEEIVLVNP + K + +L+ F EGCLSFPGIY +V+RP+S
Sbjct: 119 PQVGVNVQLMVFNPAGVKGEGEEIVLVNPVVYKSAKRLLVFEEGCLSFPGIYGNVLRPES 178
Query: 616 VKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEKKY 795
VKI+A+D+TGA+ + LS LPAR+FQHE+DHL G+LFFDRMT DVL+T+REEL+ LEKKY
Sbjct: 179 VKIEAQDVTGAKIKVKLSGLPARVFQHEFDHLLGILFFDRMTMDVLETVREELKNLEKKY 238
Query: 796 EEKTGLPSPEKVQARQKKKAGVGFGK 873
EE+TGL SPE V+ + K F +
Sbjct: 239 EERTGLASPETVENYEGAKDVFSFSR 264
>gi|326511653|dbj|BAJ91971.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 270
Score = 282 bits (720), Expect = 1e-073
Identities = 135/208 (64%), Positives = 170/208 (81%)
Frame = +1
Query: 250 KDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTDGIGL 429
+DD ASA+DL+FE PLK+V+YPDP+LRA+ KRI FD NL++LAD MFDVMYKTDGIGL
Sbjct: 63 EDDDFASAADLRFEPPLKVVQYPDPVLRARNKRINTFDNNLRSLADEMFDVMYKTDGIGL 122
Query: 430 SAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRP 609
SAPQVG+NVQLMVFNPAG GEGEEIVLVNP + K+S +L + EGCLSFPGIYA+V+RP
Sbjct: 123 SAPQVGVNVQLMVFNPAGVKGEGEEIVLVNPVVYKFSKRLSVYEEGCLSFPGIYANVLRP 182
Query: 610 QSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEK 789
+VKIDA+D +GA+ + LS L AR+FQHE+DHL+G+LFFDRMT DV+++I E+L++LE+
Sbjct: 183 DTVKIDAQDASGAKIKVKLSELSARVFQHEFDHLQGILFFDRMTMDVVESIHEQLKSLEE 242
Query: 790 KYEEKTGLPSPEKVQARQKKKAGVGFGK 873
KYEE TG SPE + + K V F +
Sbjct: 243 KYEEITGQASPETIANFRGTKDVVSFSR 270
>gi|222618926|gb|EEE55058.1| hypothetical protein OsJ_02762 [Oryza sativa
Japonica Group]
Length = 267
Score = 278 bits (710), Expect = 1e-072
Identities = 132/188 (70%), Positives = 162/188 (86%)
Frame = +1
Query: 250 KDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTDGIGL 429
+D+ A+A+DLQFE PLK+V+YPDPILRA+ KRI FD+NL++L D MFDVMYKTDGIGL
Sbjct: 62 EDEDFATAADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGL 121
Query: 430 SAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRP 609
SAPQVG+NVQLMVFNPAG GEGEEIVLVNP + K S +L+ + EGCLSFPGIYA+VVRP
Sbjct: 122 SAPQVGVNVQLMVFNPAGVKGEGEEIVLVNPVVYKMSKRLLVYEEGCLSFPGIYANVVRP 181
Query: 610 QSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEK 789
+VKIDA+D+TGA+ + LS L AR+FQHE+DHL+G+LFFDRM+ DVL+++RE L+ LEK
Sbjct: 182 DNVKIDAQDVTGAKIKVKLSGLSARVFQHEFDHLQGILFFDRMSLDVLESVREGLKDLEK 241
Query: 790 KYEEKTGL 813
KYEE TGL
Sbjct: 242 KYEESTGL 249
>gi|218188726|gb|EEC71153.1| hypothetical protein OsI_02992 [Oryza sativa Indica
Group]
Length = 997
Score = 278 bits (709), Expect = 2e-072
Identities = 139/219 (63%), Positives = 175/219 (79%), Gaps = 6/219 (2%)
Frame = +1
Query: 172 SSSSSAANRTGPLTSPVR-----AEVKRVSRKDDQVASASDLQFETPLKIVEYPDPILRA 336
+S+ +RTG + +P+R A V +D+ A+A+DLQFE PLK+V+YPDPILRA
Sbjct: 749 ASAGLPLSRTGSV-APLRHGFGSAVVTAPPAEDEDFATAADLQFEPPLKVVKYPDPILRA 807
Query: 337 KCKRIGVFDENLKNLADAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLV 516
+ KRI FD+NL++L D MFDVMYKTDGIGLSAPQVG+NVQLMVFNPAG GEGEEIVLV
Sbjct: 808 RNKRINTFDDNLRSLTDEMFDVMYKTDGIGLSAPQVGVNVQLMVFNPAGVKGEGEEIVLV 867
Query: 517 NPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGARFSISLSRLPARIFQH 696
NP + K S +L+ + E CLSFPGIYA+VVRP +VKIDA+D+TGA+ + LS L AR+FQH
Sbjct: 868 NPVVYKMSKRLLVYEESCLSFPGIYANVVRPDNVKIDAQDVTGAKIKVKLSGLSARVFQH 927
Query: 697 EYDHLEGVLFFDRMTDDVLDTIREELEALEKKYEEKTGL 813
E+DHL+G+LFFDRM+ DVL+++RE L+ LEKKYEE TGL
Sbjct: 928 EFDHLQGILFFDRMSLDVLESVREGLKDLEKKYEESTGL 966
>gi|222618921|gb|EEE55053.1| hypothetical protein OsJ_02752 [Oryza sativa
Japonica Group]
Length = 260
Score = 276 bits (704), Expect = 7e-072
Identities = 131/188 (69%), Positives = 161/188 (85%)
Frame = +1
Query: 250 KDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTDGIGL 429
+D+ A+A+DLQFE PLK+V+YPDPILRA+ KRI FD+NL++L D MFDVMYKTDGIGL
Sbjct: 42 EDEDFATAADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGL 101
Query: 430 SAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRP 609
SAPQVG+NVQLMVFNPAG GEGEEIVLVNP + K S +L+ + E CLSFPGIYA+VVRP
Sbjct: 102 SAPQVGVNVQLMVFNPAGVKGEGEEIVLVNPVVYKMSKRLLVYEESCLSFPGIYANVVRP 161
Query: 610 QSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEK 789
+VKIDA+D+TGA+ + LS L AR+FQHE+DHL+G+LFFDRM+ DVL+++RE L+ LEK
Sbjct: 162 DNVKIDAQDVTGAKIKVKLSGLSARVFQHEFDHLQGILFFDRMSLDVLESVREGLKDLEK 221
Query: 790 KYEEKTGL 813
KYEE TGL
Sbjct: 222 KYEESTGL 229
>gi|116787193|gb|ABK24406.1| unknown [Picea sitchensis]
Length = 290
Score = 265 bits (675), Expect = 2e-068
Identities = 129/213 (60%), Positives = 165/213 (77%)
Frame = +1
Query: 196 RTGPLTSPVRAEVKRVSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLK 375
R G ++ R + + + ++ AS+LQ+E PLKIV+YPD LRAK K I +FDE L+
Sbjct: 75 RMGVMSQARRGFLSELRKMKEEEDFASELQYELPLKIVKYPDSRLRAKNKPINIFDEKLQ 134
Query: 376 NLADAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVP 555
LAD MFD+MYKTDG+GLSAPQVG+NVQLMVFNPAGESG+GEE++LVNP+I KYS +
Sbjct: 135 RLADEMFDLMYKTDGVGLSAPQVGVNVQLMVFNPAGESGKGEEVILVNPEIYKYSKRKEV 194
Query: 556 FNEGCLSFPGIYADVVRPQSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDR 735
F EGCLSFP IYADV RP SVKI+A D+ G +F +SL ARIFQHEYDHL+ +LFF+R
Sbjct: 195 FTEGCLSFPEIYADVERPMSVKIEAWDVKGKKFILSLKEFNARIFQHEYDHLQRILFFER 254
Query: 736 MTDDVLDTIREELEALEKKYEEKTGLPSPEKVQ 834
M D+L+TIR L+ LE+KYE +TG+P+PE+V+
Sbjct: 255 MHPDILETIRPALQDLEQKYEIRTGMPAPERVK 287
>gi|255630300|gb|ACU15506.1| unknown [Glycine max]
Length = 221
Score = 233 bits (594), Expect = 4e-059
Identities = 119/171 (69%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Frame = +1
Query: 205 PLTSPVRAEVKR-VSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNL 381
P T+P RA K S D VAS D +F PLKIVEYPDP LRA+ KRI FD++LK L
Sbjct: 43 PRTAPPRAMAKPCFSPAQDLVASPGDFEFVLPLKIVEYPDPRLRARNKRIVAFDDSLKKL 102
Query: 382 ADAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFN 561
MFDVMYKTDGIGLSAPQ+G+NVQLMVFNP GE GEGEEIVLVNP++++YS KL FN
Sbjct: 103 VHEMFDVMYKTDGIGLSAPQLGINVQLMVFNPVGEHGEGEEIVLVNPRVSQYSKKLTLFN 162
Query: 562 EGCLSFPGIYADVVRPQSVKIDARDITGARFSISLSRLPARIFQHEYDHLE 714
EGCLSFPGI ADV RP+SVKIDAR I G FS++LS LPARIFQHE+DHL+
Sbjct: 163 EGCLSFPGINADVKRPESVKIDARGINGTMFSVNLSDLPARIFQHEFDHLQ 213
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,832,252,245,452
Number of Sequences: 15229318
Number of Extensions: 1832252245452
Number of Successful Extensions: 479243729
Number of sequences better than 0.0: 0
|
