BLASTX 7.6.2
Query= UN15811 /QuerySize=1173
(1172 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9FUZ2|DEF1B_ARATH Peptide deformylase 1B, chloroplastic OS=A... 477 7e-134
sp|Q9FV54|DEF1B_SOLLC Peptide deformylase 1B, chloroplastic OS=S... 330 1e-089
sp|Q5VNN5|DEF1B_ORYSJ Peptide deformylase 1B, chloroplastic OS=O... 288 6e-077
sp|B1XJP0|DEF_SYNP2 Peptide deformylase OS=Synechococcus sp. (st... 142 7e-033
sp|Q7V3K7|DEF_PROMP Peptide deformylase OS=Prochlorococcus marin... 136 3e-031
sp|Q3AHC4|DEF_SYNSC Peptide deformylase OS=Synechococcus sp. (st... 134 2e-030
sp|Q31DB4|DEF_PROM9 Peptide deformylase OS=Prochlorococcus marin... 133 3e-030
sp|A2BNK7|DEF_PROMS Peptide deformylase OS=Prochlorococcus marin... 132 4e-030
sp|A2BU25|DEF_PROM5 Peptide deformylase OS=Prochlorococcus marin... 131 1e-029
sp|Q0I7A5|DEF_SYNS3 Peptide deformylase OS=Synechococcus sp. (st... 131 2e-029
sp|Q8DIB4|DEF_THEEB Peptide deformylase OS=Thermosynechococcus e... 129 6e-029
sp|Q7VED2|DEF_PROMA Peptide deformylase OS=Prochlorococcus marin... 126 4e-028
sp|Q7U9D4|DEF_SYNPX Peptide deformylase OS=Synechococcus sp. (st... 126 4e-028
sp|Q7V5F9|DEF2_PROMM Peptide deformylase 2 OS=Prochlorococcus ma... 126 5e-028
sp|Q7NIF5|DEF2_GLOVI Peptide deformylase 2 OS=Gloeobacter violac... 125 7e-028
sp|P73441|DEF_SYNY3 Peptide deformylase OS=Synechocystis sp. (st... 125 7e-028
sp|Q46HV9|DEF_PROMT Peptide deformylase OS=Prochlorococcus marin... 125 9e-028
sp|A2BZN6|DEF_PROM1 Peptide deformylase OS=Prochlorococcus marin... 123 3e-027
sp|Q8YSK6|DEF1_ANASP Peptide deformylase 1 OS=Anabaena sp. (stra... 121 1e-026
sp|P94601|DEF_FREDI Peptide deformylase OS=Fremyella diplosiphon... 121 1e-026
>sp|Q9FUZ2|DEF1B_ARATH Peptide deformylase 1B, chloroplastic OS=Arabidopsis
thaliana GN=PDF1B PE=1 SV=2
Length = 273
Score = 477 bits (1227), Expect = 7e-134
Identities = 242/273 (88%), Positives = 254/273 (93%), Gaps = 3/273 (1%)
Frame = +1
Query: 58 CNCFLQAPPLSRFLSPVLSRRATNLFAGYGRLKSTVMFSSSSSAANRTGPLTSPVRAEVK 237
CNCFLQAPPLSR L PVLSRRAT L AGYGRLKSTV F S+ NRT PLTS VRAEVK
Sbjct: 4 CNCFLQAPPLSRILLPVLSRRATTLSAGYGRLKSTVTFCST---VNRTSPLTSSVRAEVK 60
Query: 238 RVSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTD 417
RVSRKDD+VASA+D+QFETPLKIVEYPDPILRAK KRI +FDENLKNL DAMFDVMYKTD
Sbjct: 61 RVSRKDDKVASATDVQFETPLKIVEYPDPILRAKNKRIDIFDENLKNLVDAMFDVMYKTD 120
Query: 418 GIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYAD 597
GIGLSAPQVGLNVQLMVFNPAGE GEG+EIVLVNPKI KYSDKLVPF+EGCLSFPGIYA+
Sbjct: 121 GIGLSAPQVGLNVQLMVFNPAGEPGEGKEIVLVNPKIKKYSDKLVPFDEGCLSFPGIYAE 180
Query: 598 VVRPQSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELE 777
VVRPQSVKIDARDITG RFSISLSRLPARIFQHEYDHLEGVLFFDRMTD VLD+IREELE
Sbjct: 181 VVRPQSVKIDARDITGERFSISLSRLPARIFQHEYDHLEGVLFFDRMTDQVLDSIREELE 240
Query: 778 ALEKKYEEKTGLPSPEKVQARQKKKAGVGFGKR 876
ALEKKYEEKTGLPSPE+V+ARQK+KAGVGFGKR
Sbjct: 241 ALEKKYEEKTGLPSPERVEARQKRKAGVGFGKR 273
>sp|Q9FV54|DEF1B_SOLLC Peptide deformylase 1B, chloroplastic OS=Solanum
lycopersicum GN=PDF1B PE=2 SV=1
Length = 279
Score = 330 bits (846), Expect = 1e-089
Identities = 172/283 (60%), Positives = 212/283 (74%), Gaps = 12/283 (4%)
Frame = +1
Query: 46 MASVCNCFLQAPPLSRFLSPVLSRRATNLFAGYG--RLKST--VMFSSSSSAANRTGPLT 213
MA + + +RFL P+LSR ++ Y R KS + FS+SS+ P
Sbjct: 1 MAMAAASWASSSSFTRFLRPLLSRNSSPSPISYSLHRYKSANCLFFSASSNK-----PPK 55
Query: 214 SPVRAEVKRV---SRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLA 384
V A+ +RV K D++A+ +DL F PLKIVEYPDPILRAK KRI FD NLK L
Sbjct: 56 LAVYAQARRVLSSKTKGDEIATPADLSFVVPLKIVEYPDPILRAKNKRIDNFDANLKKLV 115
Query: 385 DAMFDVMYKTDGIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNE 564
D MFD+MYKTDGIGLSAPQVG+NVQLMVFN AGE GEGEEIVLVNP++++YS +++P+ E
Sbjct: 116 DEMFDIMYKTDGIGLSAPQVGMNVQLMVFNAAGERGEGEEIVLVNPRVSRYSRRIIPYEE 175
Query: 565 GCLSFPGIYADVVRPQSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTD 744
GCLSFP I+ DV RP+SVK+DA+DI G RF ISLS LPAR+FQHE+DHL+GVLFFD+MTD
Sbjct: 176 GCLSFPMIHGDVKRPESVKVDAQDINGTRFEISLSALPARVFQHEFDHLQGVLFFDKMTD 235
Query: 745 DVLDTIREELEALEKKYEEKTGLPSPEKVQARQKKKAGVGFGK 873
+VLDTIRE+L ALEKKYE++TGLP+PE + R+ KKA VGFGK
Sbjct: 236 EVLDTIREKLVALEKKYEDRTGLPTPESINTRKIKKAAVGFGK 278
>sp|Q5VNN5|DEF1B_ORYSJ Peptide deformylase 1B, chloroplastic OS=Oryza sativa
subsp. japonica GN=PDF1B PE=2 SV=1
Length = 269
Score = 288 bits (736), Expect = 6e-077
Identities = 137/208 (65%), Positives = 173/208 (83%)
Frame = +1
Query: 250 KDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTDGIGL 429
+D+ A+A+DLQFE PLK+V+YPDPILRA+ KRI FD+NL++L D MFDVMYKTDGIGL
Sbjct: 62 EDEDFATAADLQFEPPLKVVKYPDPILRARNKRINTFDDNLRSLTDEMFDVMYKTDGIGL 121
Query: 430 SAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRP 609
SAPQVG+NVQLMVFNPAG GEGEEIVLVNP + K S +L+ + EGCLSFPGIYA+VVRP
Sbjct: 122 SAPQVGVNVQLMVFNPAGVKGEGEEIVLVNPVVYKMSKRLLVYEEGCLSFPGIYANVVRP 181
Query: 610 QSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEK 789
+VKIDA+D+TGA+ + LS L AR+FQHE+DHL+G+LFFDRM+ DVL+++RE L+ LEK
Sbjct: 182 DNVKIDAQDVTGAKIKVKLSGLSARVFQHEFDHLQGILFFDRMSLDVLESVREGLKDLEK 241
Query: 790 KYEEKTGLPSPEKVQARQKKKAGVGFGK 873
KYEE TGL SPE ++ + +K + F +
Sbjct: 242 KYEESTGLVSPESIENYKGRKDLISFSR 269
>sp|B1XJP0|DEF_SYNP2 Peptide deformylase OS=Synechococcus sp. (strain ATCC 27264
/ PCC 7002 / PR-6) GN=def PE=3 SV=1
Length = 187
Score = 142 bits (356), Expect = 7e-033
Identities = 66/152 (43%), Positives = 98/152 (64%)
Frame = +1
Query: 295 PLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 474
PL++ D +LR K KRI D+ ++ LA M MY + GIGL+APQVG+N +L+V +
Sbjct: 16 PLELHYLGDKVLRQKAKRIAKVDDEIRTLAKEMLQTMYSSQGIGLAAPQVGVNKRLIVID 75
Query: 475 PAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGARF 654
E+ +VL+NP+I K+ +L PF EGCLS PG++ DV+RP +++ RD G
Sbjct: 76 TDPENPANAPLVLINPEIKKFGQQLCPFEEGCLSIPGVHLDVIRPDEIEVSYRDEQGKPK 135
Query: 655 SISLSRLPARIFQHEYDHLEGVLFFDRMTDDV 750
I S L +R+ QHE DHL+GV+F DR+ +++
Sbjct: 136 RIKASGLLSRVIQHEIDHLDGVMFVDRVENEI 167
>sp|Q7V3K7|DEF_PROMP Peptide deformylase OS=Prochlorococcus marinus subsp.
pastoris (strain CCMP1986 / MED4) GN=def PE=3 SV=1
Length = 201
Score = 136 bits (342), Expect = 3e-031
Identities = 71/173 (41%), Positives = 101/173 (58%), Gaps = 1/173 (0%)
Frame = +1
Query: 226 AEVKRVSRKDDQVASASDLQFETP-LKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDV 402
+++ R S+ + + S Q TP L+I + D +LR KRI D +++NLA M
Sbjct: 6 SQLARKSKTNSPIEKVSKEQTGTPSLEIYKLGDDVLRENAKRISKVDNSIRNLAKDMLQS 65
Query: 403 MYKTDGIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFP 582
MY GIGL+APQ+G+ +L+V + E E ++L+NP+I Y L + EGCLS P
Sbjct: 66 MYAAKGIGLAAPQIGIKKELLVIDVNFEDAAAEPLILINPEITDYGTTLNSYEEGCLSIP 125
Query: 583 GIYADVVRPQSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMT 741
G+Y +VVRP ++K+ RD G + L AR QHE DHL GVLF DR+T
Sbjct: 126 GVYLNVVRPSTIKLRFRDEMGRPRKMKADGLLARCIQHEMDHLNGVLFVDRVT 178
>sp|Q3AHC4|DEF_SYNSC Peptide deformylase OS=Synechococcus sp. (strain CC9605)
GN=def PE=3 SV=1
Length = 201
Score = 134 bits (335), Expect = 2e-030
Identities = 80/194 (41%), Positives = 111/194 (57%), Gaps = 5/194 (2%)
Frame = +1
Query: 226 AEVKRVSRKDDQVASASDLQFET-PLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDV 402
AE+ R + K ET PL+I D +LR +RIG +E ++ LA M
Sbjct: 6 AELARQADKSRDTMLVPKTALETPPLEIHTLGDEVLRQPARRIGKVNEQVRELARDMLRS 65
Query: 403 MYKTDGIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFP 582
MY GIGL+APQVG++ QL+V + E+ +VL+NP+I S L + EGCLS P
Sbjct: 66 MYTAKGIGLAAPQVGIHQQLLVIDLDLENAATPPLVLINPEITAASAGLDTYEEGCLSIP 125
Query: 583 GIYADVVRPQSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTI 762
G+Y DVVRP ++++ RD G + L AR QHE DHL GVLF DR+TD D +
Sbjct: 126 GVYLDVVRPTAIELSFRDEMGRPRKMKADGLMARCIQHEMDHLNGVLFVDRVTDQ--DGL 183
Query: 763 REELEALEKKYEEK 804
++EL+ EK +E +
Sbjct: 184 QKELK--EKGFERQ 195
>sp|Q31DB4|DEF_PROM9 Peptide deformylase OS=Prochlorococcus marinus (strain MIT
9312) GN=def PE=3 SV=1
Length = 201
Score = 133 bits (333), Expect = 3e-030
Identities = 69/169 (40%), Positives = 101/169 (59%), Gaps = 4/169 (2%)
Frame = +1
Query: 298 LKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 477
L+I + D +LR KRI DE+++ L M MY GIGL+APQ+G+N +L+V +
Sbjct: 31 LEIYKLGDDVLRQNSKRITKVDESIRKLTREMIQSMYAAKGIGLAAPQIGINKELLVIDV 90
Query: 478 AGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGARFS 657
E E ++L+NP+I Y L + EGCLS PG+Y +VVRP ++K+ RD G
Sbjct: 91 NFEDSAAEPLILINPEITDYGTTLNSYEEGCLSIPGVYLNVVRPSTIKLKFRDEMGRPRK 150
Query: 658 ISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELEALEKKYEEK 804
+ L AR QHE DHL G+LF DR+T D +++EL +++ + EK
Sbjct: 151 MKADGLLARCIQHEMDHLNGILFVDRVTSK--DDLKKEL--IKEGFHEK 195
>sp|A2BNK7|DEF_PROMS Peptide deformylase OS=Prochlorococcus marinus (strain
AS9601) GN=def PE=3 SV=1
Length = 201
Score = 132 bits (332), Expect = 4e-030
Identities = 74/194 (38%), Positives = 110/194 (56%), Gaps = 5/194 (2%)
Frame = +1
Query: 226 AEVKRVSRKDDQVASASDLQFETP-LKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDV 402
+++ + SR + + Q P L I + D +LR KRI DE+++ LA M
Sbjct: 6 SQLAKKSRTNGNAEKIAKEQSGKPFLDIYKLGDDVLRQNSKRITKVDESIRKLAREMLQS 65
Query: 403 MYKTDGIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFP 582
MY GIGL+APQ+G+N +L+V + E E ++L+NP+I + L + EGCLS P
Sbjct: 66 MYAAKGIGLAAPQIGINKELLVIDVNFEDSAAEPLILINPEITDFGTTLNSYEEGCLSIP 125
Query: 583 GIYADVVRPQSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTI 762
G+Y +VVRP ++K+ RD G + L AR QHE DHL G+LF DR+T D +
Sbjct: 126 GVYLNVVRPSTIKLKFRDEMGRPRKMKADGLLARCIQHEMDHLNGILFVDRVTSK--DDL 183
Query: 763 REELEALEKKYEEK 804
+EL L++ + EK
Sbjct: 184 NKEL--LKEGFNEK 195
>sp|A2BU25|DEF_PROM5 Peptide deformylase OS=Prochlorococcus marinus (strain MIT
9515) GN=def PE=3 SV=1
Length = 203
Score = 131 bits (329), Expect = 1e-029
Identities = 71/184 (38%), Positives = 110/184 (59%), Gaps = 6/184 (3%)
Frame = +1
Query: 238 RVSRKDDQVASASDLQFET----PLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVM 405
++++K S+S ++ E PL+I + + +LR KRIG D + +NLA M M
Sbjct: 7 QLAKKSRNELSSSKVKKEVIENPPLEIFKLGNDVLRTNAKRIGKVDLDTRNLAKDMLKSM 66
Query: 406 YKTDGIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPG 585
Y GIGL+APQVG++ +L+V + E E ++L+NP+I + + L + EGCLS PG
Sbjct: 67 YSAKGIGLAAPQVGISKELLVIDINFEDSAAEPLILINPEITAFGNTLNSYEEGCLSIPG 126
Query: 586 IYADVVRPQSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMT--DDVLDT 759
+Y +VVRP ++K+ D G ++ L AR QHE DHL GVLF DR+T +D+
Sbjct: 127 VYLNVVRPSTIKLRFSDEMGRPRKMNADGLLARCIQHEVDHLRGVLFVDRVTSKEDLKTE 186
Query: 760 IREE 771
+++E
Sbjct: 187 LKKE 190
>sp|Q0I7A5|DEF_SYNS3 Peptide deformylase OS=Synechococcus sp. (strain CC9311)
GN=def PE=3 SV=1
Length = 202
Score = 131 bits (327), Expect = 2e-029
Identities = 73/174 (41%), Positives = 100/174 (57%), Gaps = 1/174 (0%)
Frame = +1
Query: 226 AEVKRVSRKDDQVASASDLQFET-PLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDV 402
A++ R + K + ET PL I D LR +RIG DE +++LA M
Sbjct: 6 AQLARSAEKSSSSIAVPKEPLETAPLDIHTLGDDALRGDARRIGKVDERVRDLARDMLRS 65
Query: 403 MYKTDGIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFP 582
MY GIGL+APQVG++ QL+V + E+ +VL+NP+I S + + EGCLS P
Sbjct: 66 MYTASGIGLAAPQVGVHQQLLVIDLDFETPSTPPLVLINPEITTCSASVDTYEEGCLSIP 125
Query: 583 GIYADVVRPQSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTD 744
G+Y DVVRP ++++ RD G ++ L AR QHE DHL GVLF DR+TD
Sbjct: 126 GVYLDVVRPTAIQLSFRDEMGRPRTMKADGLMARCIQHEMDHLRGVLFVDRVTD 179
>sp|Q8DIB4|DEF_THEEB Peptide deformylase OS=Thermosynechococcus elongatus
(strain BP-1) GN=def PE=3 SV=1
Length = 188
Score = 129 bits (322), Expect = 6e-029
Identities = 66/161 (40%), Positives = 98/161 (60%), Gaps = 2/161 (1%)
Frame = +1
Query: 295 PLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 474
PL++ D +LR KR+ D++++++A M MY DGIGL+APQVG+N Q++V +
Sbjct: 16 PLQLHYLGDRVLRQPAKRVSKVDDSIRDIARKMLQTMYSADGIGLAAPQVGINKQILVID 75
Query: 475 PAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGARF 654
+ E E +V++NP I +S++L EGCLS PG+Y +V RP V++ +D G
Sbjct: 76 IHPDDPEAEPLVMINPVIKDFSEELEVCQEGCLSIPGVYLEVRRPAMVEVSYKDEWGRPQ 135
Query: 655 SISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELE 777
I L AR QHE DHL GV+F DR+ + L +R EL+
Sbjct: 136 VIMAGGLLARAIQHEIDHLTGVMFVDRVENQAL--LRHELK 174
>sp|Q7VED2|DEF_PROMA Peptide deformylase OS=Prochlorococcus marinus GN=def PE=3
SV=1
Length = 203
Score = 126 bits (315), Expect = 4e-028
Identities = 66/160 (41%), Positives = 96/160 (60%), Gaps = 2/160 (1%)
Frame = +1
Query: 298 LKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTDGIGLSAPQVGLNVQLMVFNP 477
L+I + LR KRI D+N+++L M MY GIGL+APQ+G QL+V +
Sbjct: 31 LEIHTLGNSALRQSAKRISKVDKNIRDLVKKMLHSMYAAKGIGLAAPQIGSQQQLLVIDL 90
Query: 478 AGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGARFS 657
E+ I+L+NP+I ++S + + EGCLS PG+Y DV+RP S+K++ RD G
Sbjct: 91 DIENSATPPIILINPEITEFSATIDTYEEGCLSIPGVYLDVIRPSSIKVNFRDEMGRPKK 150
Query: 658 ISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREELE 777
I+ L AR QHE DHL GVLF DR ++ + + +EL+
Sbjct: 151 INADGLLARCIQHEMDHLNGVLFVDRAINE--EALNKELK 188
>sp|Q7U9D4|DEF_SYNPX Peptide deformylase OS=Synechococcus sp. (strain WH8102)
GN=def PE=3 SV=1
Length = 201
Score = 126 bits (315), Expect = 4e-028
Identities = 70/175 (40%), Positives = 98/175 (56%), Gaps = 1/175 (0%)
Frame = +1
Query: 226 AEVKRVSRKDDQVASASDLQFET-PLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDV 402
A++ R + + ET PL+I +LR +RIG E + LA M
Sbjct: 6 AQLARAAEQSRDTMLVPKTALETPPLEIHTLGAEVLRQSARRIGKVTEQTRELARDMLRS 65
Query: 403 MYKTDGIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFP 582
MY GIGL+APQVG++ QL+V + E+ +VL+NP+I+ S + + EGCLS P
Sbjct: 66 MYTAKGIGLAAPQVGIHQQLLVIDLDLENAATPPLVLINPEISAASASIDTYEEGCLSIP 125
Query: 583 GIYADVVRPQSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTDD 747
G+Y DVVRP ++++ RD G + L AR QHE DHL GVLF DR+TD+
Sbjct: 126 GVYLDVVRPTAIELSFRDEMGRPRKMKADGLMARCIQHEMDHLNGVLFVDRVTDE 180
>sp|Q7V5F9|DEF2_PROMM Peptide deformylase 2 OS=Prochlorococcus marinus (strain
MIT 9313) GN=def2 PE=3 SV=1
Length = 201
Score = 126 bits (314), Expect = 5e-028
Identities = 71/175 (40%), Positives = 101/175 (57%), Gaps = 1/175 (0%)
Frame = +1
Query: 226 AEVKRVSRK-DDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDV 402
A++ R + K VA + PL+I + +LR +RIG DE++++L M
Sbjct: 6 AQLARTAEKTKGSVAVPKEPLDHPPLQIHTLGNGVLRQSTRRIGKVDESVRDLVRDMLRS 65
Query: 403 MYKTDGIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFP 582
MY GIGL+APQVG++ QL+V + E+ +VL+NP+I S + + EGCLS P
Sbjct: 66 MYAAKGIGLAAPQVGIHKQLLVLDLDLETPTTPPVVLINPEIISSSATVETYEEGCLSIP 125
Query: 583 GIYADVVRPQSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTDD 747
G+Y +VVRP + + RD G + L AR QHE DHLEGVLF DR+TD+
Sbjct: 126 GVYLNVVRPSEIVLSFRDEMGRPRKMKADGLMARCIQHEMDHLEGVLFVDRVTDE 180
>sp|Q7NIF5|DEF2_GLOVI Peptide deformylase 2 OS=Gloeobacter violaceus GN=def2
PE=3 SV=1
Length = 187
Score = 125 bits (313), Expect = 7e-028
Identities = 65/152 (42%), Positives = 91/152 (59%)
Frame = +1
Query: 295 PLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 474
PL I D +LR K+I ++ ++ LA M MY DGIGL+APQVG+N +++V +
Sbjct: 16 PLAIHTLGDRVLRQGSKQISGINDEVRKLAQQMLQTMYSADGIGLAAPQVGVNKRMIVVD 75
Query: 475 PAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGARF 654
E+ +VL+NP I ++S L EGCLS P IYADV RP+ V RD+ G
Sbjct: 76 IDPENAARPPLVLINPLIKQFSSDLAVDQEGCLSVPSIYADVRRPERVVATYRDLNGRPV 135
Query: 655 SISLSRLPARIFQHEYDHLEGVLFFDRMTDDV 750
++ + L AR QHE DHL+GVLF DR+ + +
Sbjct: 136 TLEATGLLARCIQHEIDHLDGVLFVDRVENQI 167
>sp|P73441|DEF_SYNY3 Peptide deformylase OS=Synechocystis sp. (strain PCC 6803)
GN=def PE=3 SV=1
Length = 187
Score = 125 bits (313), Expect = 7e-028
Identities = 59/148 (39%), Positives = 92/148 (62%)
Frame = +1
Query: 295 PLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 474
PL++ D +LR KRI D++++ LA M MY +GIGL+APQVG+N QL+V +
Sbjct: 16 PLELHYLGDKVLRQPAKRIAKVDDSIRKLAKEMLQTMYSANGIGLAAPQVGINKQLLVVD 75
Query: 475 PAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGARF 654
+ + ++++NP+I + S++L EGCLS P +Y DV RP+++++ +D G
Sbjct: 76 CEQDKPDEPPLIMINPQITRTSEELCVVEEGCLSVPNVYMDVTRPRAIEVTYKDEHGRPQ 135
Query: 655 SISLSRLPARIFQHEYDHLEGVLFFDRM 738
+ L AR+ QHE DHL GV+F DR+
Sbjct: 136 KRLFAELTARVIQHEMDHLNGVMFVDRV 163
>sp|Q46HV9|DEF_PROMT Peptide deformylase OS=Prochlorococcus marinus (strain
NATL2A) GN=def PE=3 SV=1
Length = 202
Score = 125 bits (312), Expect = 9e-028
Identities = 65/171 (38%), Positives = 95/171 (55%)
Frame = +1
Query: 235 KRVSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKT 414
K +K ++ + + PLK+ + D LR RI D+ ++ LA M MY +
Sbjct: 10 KNAEKKKPSISVSKEPVENPPLKVYQLGDEALRTPANRIVKVDDAIRKLAKDMLITMYSS 69
Query: 415 DGIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYA 594
GIGL+APQVG+ +L+V + E +V +NP+I S L + EGCLS PG+Y
Sbjct: 70 KGIGLAAPQVGIQKRLLVIDLKFEDPNSPPMVFINPEIISSSATLDTYEEGCLSIPGVYL 129
Query: 595 DVVRPQSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTDD 747
+V+RP S+K+ RD G ++ L AR QHE DHL GV F D++TD+
Sbjct: 130 NVLRPSSIKLSYRDEMGRPKKMNADGLMARCIQHEIDHLNGVCFVDKVTDE 180
>sp|A2BZN6|DEF_PROM1 Peptide deformylase OS=Prochlorococcus marinus (strain
NATL1A) GN=def PE=3 SV=1
Length = 202
Score = 123 bits (308), Expect = 3e-027
Identities = 64/171 (37%), Positives = 95/171 (55%)
Frame = +1
Query: 235 KRVSRKDDQVASASDLQFETPLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKT 414
K +K ++ + + PLK+ + D LR RI D+ ++ LA M MY +
Sbjct: 10 KNAEKKKPSISVSKEPVENPPLKVYQLGDEALRTPANRIVKVDDAIRKLAKDMLITMYSS 69
Query: 415 DGIGLSAPQVGLNVQLMVFNPAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYA 594
GIGL+APQVG+ +L+V + E +V +NP+I S + + EGCLS PG+Y
Sbjct: 70 KGIGLAAPQVGIQKRLLVIDLNFEDPNSPPMVFINPEIISSSATVDTYEEGCLSIPGVYL 129
Query: 595 DVVRPQSVKIDARDITGARFSISLSRLPARIFQHEYDHLEGVLFFDRMTDD 747
+V+RP S+K+ RD G ++ L AR QHE DHL GV F D++TD+
Sbjct: 130 NVLRPSSIKLSYRDEMGRPKKMNADGLMARCIQHEIDHLNGVCFVDKVTDE 180
>sp|Q8YSK6|DEF1_ANASP Peptide deformylase 1 OS=Anabaena sp. (strain PCC 7120)
GN=def1 PE=3 SV=1
Length = 187
Score = 121 bits (303), Expect = 1e-026
Identities = 63/160 (39%), Positives = 95/160 (59%), Gaps = 2/160 (1%)
Frame = +1
Query: 295 PLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 474
PL++ D +LR KRI D+ + L M MY +DGIGL+APQVG+N QL+V +
Sbjct: 16 PLQLHYLGDRVLRQPAKRITKVDDETRQLIRDMLQTMYSSDGIGLAAPQVGINKQLIVID 75
Query: 475 PAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGARF 654
++ ++L+NP I + S ++ EGCLS PG+Y DV RP+ V++ +D G
Sbjct: 76 CEPDNPANPPLILINPTIKQVSREICSAQEGCLSIPGVYMDVKRPEVVEVAYKDENGRPQ 135
Query: 655 SISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREEL 774
++ + L R QHE DHL GV+F DR+ + + T+ +EL
Sbjct: 136 TLKATDLLGRCIQHEMDHLNGVVFVDRVDNSL--TLAQEL 173
>sp|P94601|DEF_FREDI Peptide deformylase OS=Fremyella diplosiphon GN=def PE=3
SV=1
Length = 187
Score = 121 bits (303), Expect = 1e-026
Identities = 65/160 (40%), Positives = 95/160 (59%), Gaps = 2/160 (1%)
Frame = +1
Query: 295 PLKIVEYPDPILRAKCKRIGVFDENLKNLADAMFDVMYKTDGIGLSAPQVGLNVQLMVFN 474
PL++ D +LR KRI D+ L+ L M MY DGIGL+APQVG++ QL+V +
Sbjct: 16 PLQLHYLGDRVLRQPAKRIAKVDDELRQLIRDMLQTMYSKDGIGLAAPQVGIHKQLIVID 75
Query: 475 PAGESGEGEEIVLVNPKINKYSDKLVPFNEGCLSFPGIYADVVRPQSVKIDARDITGARF 654
++ +VL+NP I + S ++ EGCLS P +Y DV RP+ V+I +D G
Sbjct: 76 LEPDNPANPPLVLINPTIKQVSKEICVAQEGCLSIPNVYMDVKRPEVVEIAYKDENGRPK 135
Query: 655 SISLSRLPARIFQHEYDHLEGVLFFDRMTDDVLDTIREEL 774
++ + L AR QHE DHL GV+F DR+ + + T+ +EL
Sbjct: 136 TLKATDLLARCIQHEMDHLNGVVFVDRVDNSL--TLAQEL 173
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,834,329,955
Number of Sequences: 518415
Number of Extensions: 63834329955
Number of Successful Extensions: 437743986
Number of sequences better than 0.0: 0
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