BLASTX 7.6.2
Query= UN16068 /QuerySize=1058
(1057 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G30060.1 | Symbols: | Ran-binding protein 1b ... 236 3e-062
TAIR9_protein||AT1G07140.1 | Symbols: SIRANBP | SIRANBP; Ran GTP... 216 2e-056
TAIR9_protein||AT5G58590.1 | Symbols: RANBP1 | RANBP1 (RAN BINDI... 198 6e-051
>TAIR9_protein||AT2G30060.1 | Symbols: | Ran-binding protein 1b (RanBP1b) |
chr2:12827035-12828551 FORWARD
Length = 218
Score = 236 bits (600), Expect = 3e-062
Identities = 125/161 (77%), Positives = 134/161 (83%), Gaps = 11/161 (6%)
Frame = +3
Query: 285 KMGVSGRREVLGLSSSLKHKETGKIRLVMRQSKTLKICANHLVTSGMSVQEHAGNDKSCV 464
K G + G LKH+ +GKIRLVMRQSKTLKICANHLV SGMSVQEHAGNDKSCV
Sbjct: 63 KDGSQWKERGAGTVKFLKHRVSGKIRLVMRQSKTLKICANHLVGSGMSVQEHAGNDKSCV 122
Query: 465 WHARDFSDGELKDELFCIRFANVENCKAFMQKFKEVAESEEEKEESKDASEAAGLLEKLT 644
WHARDFSDGELKDELFCIRFA+VENCKAFMQKFKEVAESEEEKEESKDAS+ AGLLEKLT
Sbjct: 123 WHARDFSDGELKDELFCIRFASVENCKAFMQKFKEVAESEEEKEESKDASDTAGLLEKLT 182
Query: 645 VEEKHTEEEEKKEEKPVEKAE-----KAVEEKKTEETVPSA 752
VEEK + E+KPVEKAE +AVEEKKTEE+VPSA
Sbjct: 183 VEEK------ESEKKPVEKAEENKKSEAVEEKKTEESVPSA 217
Score = 153 bits (386), Expect = 2e-037
Identities = 74/80 (92%), Positives = 80/80 (100%)
Frame = +2
Query: 98 MASISNEPEREHRDEEESGANEDEDTGAQVAPIIKLEEVAVTTGEENEDTILDLKSKLYR 277
MASISNEPERE+RDEEE+GANEDEDTGAQVAPI++LEEVAVTTGEE+EDTILDLKSKLYR
Sbjct: 1 MASISNEPERENRDEEETGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDTILDLKSKLYR 60
Query: 278 FDKDGSQWKERGAGTVKFLE 337
FDKDGSQWKERGAGTVKFL+
Sbjct: 61 FDKDGSQWKERGAGTVKFLK 80
>TAIR9_protein||AT1G07140.1 | Symbols: SIRANBP | SIRANBP; Ran GTPase binding |
chr1:2192360-2193688 REVERSE
Length = 229
Score = 216 bits (549), Expect = 2e-056
Identities = 112/146 (76%), Positives = 119/146 (81%), Gaps = 4/146 (2%)
Frame = +3
Query: 318 GLSSSLKHKETGKIRLVMRQSKTLKICANHLVTSGMSVQEHAGNDKSCVWHARDFSDGEL 497
G LKHK TGKIRLVMRQSKTLKICANH V SGMSVQEH GN+KSCVWHARDF+DGEL
Sbjct: 72 GTVKFLKHKNTGKIRLVMRQSKTLKICANHFVKSGMSVQEHVGNEKSCVWHARDFADGEL 131
Query: 498 KDELFCIRFANVENCKAFMQKFKEVAESEEEKEESKDASEAAGLLEKLTVEEKHTEEEEK 677
KDELFCIRFA++ENCK FMQKFKEVAESEEEKEESKDA++ AGLLEKLTVEE T+ EEK
Sbjct: 132 KDELFCIRFASIENCKTFMQKFKEVAESEEEKEESKDAADTAGLLEKLTVEE--TKTEEK 189
Query: 678 KEEKPVE--KAEKAVEEKKTEETVPS 749
E K VE K E EEKK E S
Sbjct: 190 TEAKAVETAKTEVKAEEKKESEAEKS 215
Score = 141 bits (353), Expect = 1e-033
Identities = 65/76 (85%), Positives = 73/76 (96%)
Frame = +2
Query: 110 SNEPEREHRDEEESGANEDEDTGAQVAPIIKLEEVAVTTGEENEDTILDLKSKLYRFDKD 289
+NEPE EHRDEEE+GANEDEDTGAQVAPI++LEEVAVTTGEE+ED +LDLKSKLYRFDKD
Sbjct: 3 TNEPEHEHRDEEEAGANEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKLYRFDKD 62
Query: 290 GSQWKERGAGTVKFLE 337
+QWKERGAGTVKFL+
Sbjct: 63 ANQWKERGAGTVKFLK 78
>TAIR9_protein||AT5G58590.1 | Symbols: RANBP1 | RANBP1 (RAN BINDING PROTEIN 1);
protein binding | chr5:23680319-23681714 REVERSE
Length = 220
Score = 198 bits (502), Expect = 6e-051
Identities = 99/157 (63%), Positives = 117/157 (74%), Gaps = 7/157 (4%)
Frame = +3
Query: 285 KMGVSGRREVLGLSSSLKHKETGKIRLVMRQSKTLKICANHLVTSGMSVQEHAGNDKSCV 464
K G + G LKHKETGK+RLVMRQSKTLKICANHL++SGMSVQEH+GN+KSC+
Sbjct: 60 KEGNQWKERGAGTVKLLKHKETGKVRLVMRQSKTLKICANHLISSGMSVQEHSGNEKSCL 119
Query: 465 WHARDFSDGELKDELFCIRFANVENCKAFMQKFKEVAESEEEKEESKDASEAAGLLEKLT 644
WHA DFSDGELKDELFCIRFA++ENCK FM+KF E+AES++ +ES EAAGL+E L+
Sbjct: 120 WHATDFSDGELKDELFCIRFASIENCKTFMEKFTEIAESQQVGKESTQGDEAAGLIENLS 179
Query: 645 VEE-------KHTEEEEKKEEKPVEKAEKAVEEKKTE 734
VEE K EE+E +E K EK EEKKTE
Sbjct: 180 VEENISEEKAKEAEEKEPAKEDKETKKEKVEEEKKTE 216
Score = 124 bits (309), Expect = 2e-028
Identities = 59/76 (77%), Positives = 70/76 (92%), Gaps = 1/76 (1%)
Frame = +2
Query: 110 SNEPEREHRDEEESGANEDEDTGAQVAPIIKLEEVAVTTGEENEDTILDLKSKLYRFDKD 289
S EPERE+R E+E+ NEDEDTGAQVAPI++LEEVAVTTGEE+ED +LDLKSK+YRFDK+
Sbjct: 3 STEPERENR-EDETEVNEDEDTGAQVAPIVRLEEVAVTTGEEDEDAVLDLKSKMYRFDKE 61
Query: 290 GSQWKERGAGTVKFLE 337
G+QWKERGAGTVK L+
Sbjct: 62 GNQWKERGAGTVKLLK 77
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,373,012,670
Number of Sequences: 33410
Number of Extensions: 8373012670
Number of Successful Extensions: 295706460
Number of sequences better than 0.0: 0
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