BLASTX 7.6.2
Query= UN16110 /QuerySize=1192
(1191 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9M1X0|RRFC_ARATH Ribosome-recycling factor, chloroplastic OS... 438 4e-122
sp|P82231|RRFC_SPIOL Ribosome-recycling factor, chloroplastic OS... 313 2e-084
sp|P37706|RRFC_DAUCA Ribosome-recycling factor, chloroplastic (F... 303 2e-081
sp|A2YMU2|RRFC_ORYSI Ribosome-recycling factor, chloroplastic OS... 302 5e-081
sp|A3BLC3|RRFC_ORYSJ Ribosome-recycling factor, chloroplastic OS... 302 5e-081
sp|Q8YXK4|RRF_ANASP Ribosome-recycling factor OS=Anabaena sp. (s... 217 2e-055
sp|Q31QY0|RRF_SYNE7 Ribosome-recycling factor OS=Synechococcus e... 215 9e-055
sp|Q5N3B7|RRF_SYNP6 Ribosome-recycling factor OS=Synechococcus s... 215 9e-055
sp|Q2JHW2|RRF_SYNJB Ribosome-recycling factor OS=Synechococcus s... 212 6e-054
sp|Q8DM64|RRF_THEEB Ribosome-recycling factor OS=Thermosynechoco... 207 2e-052
sp|B7K7R4|RRF_CYAP7 Ribosome-recycling factor OS=Cyanothece sp. ... 206 4e-052
sp|B8HL79|RRF_CYAP4 Ribosome-recycling factor OS=Cyanothece sp. ... 205 5e-052
sp|B2IVW4|RRF_NOSP7 Ribosome-recycling factor OS=Nostoc punctifo... 205 7e-052
sp|B1X0Q1|RRF_CYAA5 Ribosome-recycling factor OS=Cyanothece sp. ... 204 1e-051
sp|B0JKT7|RRF_MICAN Ribosome-recycling factor OS=Microcystis aer... 203 3e-051
sp|P74456|RRF_SYNY3 Ribosome-recycling factor OS=Synechocystis s... 203 3e-051
sp|Q10Y49|RRF_TRIEI Ribosome-recycling factor OS=Trichodesmium e... 201 1e-050
sp|A9BEE4|RRF_PROM4 Ribosome-recycling factor OS=Prochlorococcus... 200 2e-050
sp|B1XJ13|RRF_SYNP2 Ribosome-recycling factor OS=Synechococcus s... 199 5e-050
sp|Q7V6C1|RRF_PROMM Ribosome-recycling factor OS=Prochlorococcus... 197 1e-049
>sp|Q9M1X0|RRFC_ARATH Ribosome-recycling factor, chloroplastic OS=Arabidopsis
thaliana GN=RRF PE=1 SV=2
Length = 275
Score = 438 bits (1126), Expect = 4e-122
Identities = 234/275 (85%), Positives = 253/275 (92%), Gaps = 1/275 (0%)
Frame = +2
Query: 89 AASLSSNAQTTPILRFRASDSKSLVSPPGSCLRVMASNNASSARAIACSLRSDNPWLGAG 268
AAS SS A TTP+LRFRA+ SK L+S P SCLR+++S + S R IACS ++D LGAG
Sbjct: 2 AASFSSTAPTTPVLRFRANYSKPLLSLPDSCLRIISSAISPSTRLIACSFKTDKLPLGAG 61
Query: 269 VKLSGGGPVVKRSLQKRVVIRSATIEEIEAEKSAIEKDVKSKMERTIETLRTSFNSIRTG 448
V LS GGPVVKRSLQKR+VIRSATIEEIEAEKSAIE DVKSKME+TIETLRTSFNSIRTG
Sbjct: 62 VNLS-GGPVVKRSLQKRLVIRSATIEEIEAEKSAIETDVKSKMEKTIETLRTSFNSIRTG 120
Query: 449 RANVAMLDKIEVEYYGSPVSLKSIAQISTPDGTSLLLQPYDKSSLKAIEKAIVSSDLGVT 628
R+N AMLDKIEVEYYGSPVSLKSIAQISTPDG+SLLLQPYDKSSLKAIEKAIV+SDLGVT
Sbjct: 121 RSNAAMLDKIEVEYYGSPVSLKSIAQISTPDGSSLLLQPYDKSSLKAIEKAIVNSDLGVT 180
Query: 629 PNNDGDVIRLSLPPLTSERRKELTKVVAKQTEEGKVALRNIRRDALKSYDKLEKEKKLSE 808
PNNDGDVIRLSLPPLTS+RRKEL+KVVAKQ+EEGKVALRNIRRDALKSYDKLEKEKKLSE
Sbjct: 181 PNNDGDVIRLSLPPLTSDRRKELSKVVAKQSEEGKVALRNIRRDALKSYDKLEKEKKLSE 240
Query: 809 DNVKDLSSDLQKLIDTYMKKVEELCKQKEKELLKV 913
DNVKDLSSDLQKLID YMKK+EEL KQKEKEL+KV
Sbjct: 241 DNVKDLSSDLQKLIDVYMKKIEELYKQKEKELMKV 275
>sp|P82231|RRFC_SPIOL Ribosome-recycling factor, chloroplastic OS=Spinacia
oleracea GN=RRF PE=1 SV=1
Length = 271
Score = 313 bits (801), Expect = 2e-084
Identities = 168/242 (69%), Positives = 197/242 (81%), Gaps = 6/242 (2%)
Frame = +2
Query: 191 MASNNASSARAIACSLRSDNPWLGAGVKLSGGGPVVKRSLQKRV-VIRSATIEEIEAEKS 367
+A N S R+ A +R D GVK G VV + LQ R R AT+EE+EAEKS
Sbjct: 35 IARTNVSVWRSSANYVRMD-----CGVKKFSGKAVVVKQLQNRAGTFRCATMEEVEAEKS 89
Query: 368 AIEKDVKSKMERTIETLRTSFNSIRTGRANVAMLDKIEVEYYGSPVSLKSIAQISTPDGT 547
IE + K +ME+TIET+R++FNS+RT RA+ MLD+IEVEYYG+PVSLKSIAQISTPD +
Sbjct: 90 LIETNTKQRMEKTIETIRSNFNSVRTNRASPTMLDRIEVEYYGTPVSLKSIAQISTPDAS 149
Query: 548 SLLLQPYDKSSLKAIEKAIVSSDLGVTPNNDGDVIRLSLPPLTSERRKELTKVVAKQTEE 727
SLL+ PYDKSSLKAIEKAIV+S LGV+PNNDG+VIRLSLPPLTS+RRKEL KVV+K EE
Sbjct: 150 SLLISPYDKSSLKAIEKAIVTSQLGVSPNNDGEVIRLSLPPLTSDRRKELAKVVSKLAEE 209
Query: 728 GKVALRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDTYMKKVEELCKQKEKELL 907
GKVA+RNIRRDALKSY+KLEKEKKLSEDNVKDLS+DLQKL D YMKKVE + KQKE+EL+
Sbjct: 210 GKVAVRNIRRDALKSYEKLEKEKKLSEDNVKDLSADLQKLTDEYMKKVESIYKQKEQELM 269
Query: 908 KV 913
KV
Sbjct: 270 KV 271
>sp|P37706|RRFC_DAUCA Ribosome-recycling factor, chloroplastic (Fragment)
OS=Daucus carota GN=RRF PE=2 SV=2
Length = 227
Score = 303 bits (774), Expect = 2e-081
Identities = 155/202 (76%), Positives = 180/202 (89%), Gaps = 1/202 (0%)
Frame = +2
Query: 311 QKRV-VIRSATIEEIEAEKSAIEKDVKSKMERTIETLRTSFNSIRTGRANVAMLDKIEVE 487
QKR ++ AT+EEIEAEKS IEK VK +ME+TIE ++ SFNSIRT R+N MLDKI+VE
Sbjct: 26 QKRTGTLKCATMEEIEAEKSLIEKSVKERMEKTIENVKASFNSIRTXRSNPDMLDKIKVE 85
Query: 488 YYGSPVSLKSIAQISTPDGTSLLLQPYDKSSLKAIEKAIVSSDLGVTPNNDGDVIRLSLP 667
YYG+P SLKSIAQISTPD +SLL+ PYDKSSLK IEKAIV+SDLG+TPNNDGDVIRLS+P
Sbjct: 86 YYGTPTSLKSIAQISTPDSSSLLVNPYDKSSLKDIEKAIVNSDLGITPNNDGDVIRLSIP 145
Query: 668 PLTSERRKELTKVVAKQTEEGKVALRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKL 847
LT++RRKEL+K+VAKQ EEGKVALRNIRRDA+KSYDKLEKEKKLSEDNVKDLSSDLQK+
Sbjct: 146 QLTADRRKELSKIVAKQAEEGKVALRNIRRDAIKSYDKLEKEKKLSEDNVKDLSSDLQKV 205
Query: 848 IDTYMKKVEELCKQKEKELLKV 913
ID Y+KKV+ + KQKEKEL+ V
Sbjct: 206 IDEYIKKVDSIFKQKEKELMTV 227
>sp|A2YMU2|RRFC_ORYSI Ribosome-recycling factor, chloroplastic OS=Oryza sativa
subsp. indica GN=OsI_26546 PE=1 SV=2
Length = 266
Score = 302 bits (771), Expect = 5e-081
Identities = 147/208 (70%), Positives = 184/208 (88%)
Frame = +2
Query: 290 PVVKRSLQKRVVIRSATIEEIEAEKSAIEKDVKSKMERTIETLRTSFNSIRTGRANVAML 469
P++ ++ KR V+R ATIEEIEAEKS IE + +ME+ IET++ +FN++RTGRAN AML
Sbjct: 59 PLILQNSDKRAVLRHATIEEIEAEKSVIEDQARERMEKAIETVQNNFNTVRTGRANPAML 118
Query: 470 DKIEVEYYGSPVSLKSIAQISTPDGTSLLLQPYDKSSLKAIEKAIVSSDLGVTPNNDGDV 649
D+IEVEYYG+PV+LKSIAQI+TPD TSLL+QPYDKSSLK IEK IV+++LGVTP+NDG+V
Sbjct: 119 DRIEVEYYGTPVNLKSIAQINTPDATSLLIQPYDKSSLKLIEKTIVAANLGVTPSNDGEV 178
Query: 650 IRLSLPPLTSERRKELTKVVAKQTEEGKVALRNIRRDALKSYDKLEKEKKLSEDNVKDLS 829
IR+++PPLTS+RRKEL K VAK EEGKVA+RNIRRDA+K+YDKLEKEKKLSEDNVKDLS
Sbjct: 179 IRVTVPPLTSDRRKELAKTVAKLAEEGKVAIRNIRRDAIKAYDKLEKEKKLSEDNVKDLS 238
Query: 830 SDLQKLIDTYMKKVEELCKQKEKELLKV 913
+DLQK+ D YMKK+E + KQKE+EL+K+
Sbjct: 239 ADLQKVTDEYMKKIEAIQKQKEQELMKI 266
>sp|A3BLC3|RRFC_ORYSJ Ribosome-recycling factor, chloroplastic OS=Oryza sativa
subsp. japonica GN=Os07g0570700 PE=2 SV=2
Length = 266
Score = 302 bits (771), Expect = 5e-081
Identities = 147/208 (70%), Positives = 184/208 (88%)
Frame = +2
Query: 290 PVVKRSLQKRVVIRSATIEEIEAEKSAIEKDVKSKMERTIETLRTSFNSIRTGRANVAML 469
P++ ++ KR V+R ATIEEIEAEKS IE + +ME+ IET++ +FN++RTGRAN AML
Sbjct: 59 PLILQNSDKRAVLRHATIEEIEAEKSVIEDQARERMEKAIETVQNNFNTVRTGRANPAML 118
Query: 470 DKIEVEYYGSPVSLKSIAQISTPDGTSLLLQPYDKSSLKAIEKAIVSSDLGVTPNNDGDV 649
D+IEVEYYG+PV+LKSIAQI+TPD TSLL+QPYDKSSLK IEK IV+++LGVTP+NDG+V
Sbjct: 119 DRIEVEYYGTPVNLKSIAQINTPDATSLLIQPYDKSSLKLIEKTIVAANLGVTPSNDGEV 178
Query: 650 IRLSLPPLTSERRKELTKVVAKQTEEGKVALRNIRRDALKSYDKLEKEKKLSEDNVKDLS 829
IR+++PPLTS+RRKEL K VAK EEGKVA+RNIRRDA+K+YDKLEKEKKLSEDNVKDLS
Sbjct: 179 IRVTVPPLTSDRRKELAKTVAKLAEEGKVAIRNIRRDAIKAYDKLEKEKKLSEDNVKDLS 238
Query: 830 SDLQKLIDTYMKKVEELCKQKEKELLKV 913
+DLQK+ D YMKK+E + KQKE+EL+K+
Sbjct: 239 ADLQKVTDEYMKKIEAIQKQKEQELMKI 266
>sp|Q8YXK4|RRF_ANASP Ribosome-recycling factor OS=Anabaena sp. (strain PCC 7120)
GN=frr PE=3 SV=1
Length = 182
Score = 217 bits (551), Expect = 2e-055
Identities = 104/178 (58%), Positives = 139/178 (78%)
Frame = +2
Query: 380 DVKSKMERTIETLRTSFNSIRTGRANVAMLDKIEVEYYGSPVSLKSIAQISTPDGTSLLL 559
+ +SKM+ T+E + +FN+IRTGRAN ++LDK+ V+YYGSP LKS+A ISTPD T++L+
Sbjct: 5 EAESKMQHTVEATQRAFNTIRTGRANASLLDKVLVDYYGSPTPLKSLANISTPDATTILI 64
Query: 560 QPYDKSSLKAIEKAIVSSDLGVTPNNDGDVIRLSLPPLTSERRKELTKVVAKQTEEGKVA 739
QPYDKSSL +EKAI SD+G+TP+NDG VIRL++PPLTS+RRKEL K+ AK EEG+VA
Sbjct: 65 QPYDKSSLNIVEKAISLSDVGLTPSNDGAVIRLNIPPLTSDRRKELVKIAAKYAEEGRVA 124
Query: 740 LRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDTYMKKVEELCKQKEKELLKV 913
+RNIRRDA+ S KLEK ++SED KD LQKL + Y +++EL +KEK++ V
Sbjct: 125 IRNIRRDAVDSIRKLEKNAEVSEDEAKDQQDKLQKLTNKYTARIDELLVEKEKDISTV 182
>sp|Q31QY0|RRF_SYNE7 Ribosome-recycling factor OS=Synechococcus elongatus
(strain PCC 7942) GN=frr PE=3 SV=1
Length = 182
Score = 215 bits (545), Expect = 9e-055
Identities = 103/178 (57%), Positives = 139/178 (78%)
Frame = +2
Query: 380 DVKSKMERTIETLRTSFNSIRTGRANVAMLDKIEVEYYGSPVSLKSIAQISTPDGTSLLL 559
DV+S M++++E SFN+IRTGRAN ++LDKI V+YYGS LKS+A ISTPD ++L +
Sbjct: 5 DVESTMQKSVEATLRSFNTIRTGRANASLLDKIVVDYYGSETPLKSLASISTPDASTLQI 64
Query: 560 QPYDKSSLKAIEKAIVSSDLGVTPNNDGDVIRLSLPPLTSERRKELTKVVAKQTEEGKVA 739
QP+D+SS+ AIEKAI SD+G+TPNNDG +IRL++PPLTS+RRKEL K+ AK EEGKVA
Sbjct: 65 QPFDRSSMGAIEKAISLSDIGLTPNNDGQIIRLNIPPLTSDRRKELVKLAAKYAEEGKVA 124
Query: 740 LRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDTYMKKVEELCKQKEKELLKV 913
+RN+RRDA+ S KLEK ++SED+ +D +QKL D + KVE+L KEK+++ V
Sbjct: 125 IRNVRRDAIDSIRKLEKSGEISEDDARDQQDQVQKLTDKFSAKVEQLLSDKEKDIMTV 182
>sp|Q5N3B7|RRF_SYNP6 Ribosome-recycling factor OS=Synechococcus sp. (strain ATCC
27144 / PCC 6301 / SAUG 1402/1) GN=frr PE=3 SV=1
Length = 182
Score = 215 bits (545), Expect = 9e-055
Identities = 103/178 (57%), Positives = 139/178 (78%)
Frame = +2
Query: 380 DVKSKMERTIETLRTSFNSIRTGRANVAMLDKIEVEYYGSPVSLKSIAQISTPDGTSLLL 559
DV+S M++++E SFN+IRTGRAN ++LDKI V+YYGS LKS+A ISTPD ++L +
Sbjct: 5 DVESTMQKSVEATLRSFNTIRTGRANASLLDKIVVDYYGSETPLKSLASISTPDASTLQI 64
Query: 560 QPYDKSSLKAIEKAIVSSDLGVTPNNDGDVIRLSLPPLTSERRKELTKVVAKQTEEGKVA 739
QP+D+SS+ AIEKAI SD+G+TPNNDG +IRL++PPLTS+RRKEL K+ AK EEGKVA
Sbjct: 65 QPFDRSSMGAIEKAISLSDIGLTPNNDGQIIRLNIPPLTSDRRKELVKLAAKYAEEGKVA 124
Query: 740 LRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDTYMKKVEELCKQKEKELLKV 913
+RN+RRDA+ S KLEK ++SED+ +D +QKL D + KVE+L KEK+++ V
Sbjct: 125 IRNVRRDAIDSIRKLEKSGEISEDDARDQQDQVQKLTDKFSAKVEQLLSDKEKDIMTV 182
>sp|Q2JHW2|RRF_SYNJB Ribosome-recycling factor OS=Synechococcus sp. GN=frr PE=3
SV=1
Length = 182
Score = 212 bits (538), Expect = 6e-054
Identities = 99/175 (56%), Positives = 139/175 (79%)
Frame = +2
Query: 380 DVKSKMERTIETLRTSFNSIRTGRANVAMLDKIEVEYYGSPVSLKSIAQISTPDGTSLLL 559
+++ M + ++ + SFN++RTGRAN ++LD+I+VEYYG P LK++A ++TPD ++LL+
Sbjct: 5 EIEELMNKAVQATQRSFNTVRTGRANSSLLDRIQVEYYGVPTPLKALASLTTPDSSTLLI 64
Query: 560 QPYDKSSLKAIEKAIVSSDLGVTPNNDGDVIRLSLPPLTSERRKELTKVVAKQTEEGKVA 739
QP+D S+L AIE+AIV+SDLG+TP+NDG V+RL++PPLT ERRKEL+K VAK EEG+V+
Sbjct: 65 QPFDPSTLAAIERAIVASDLGLTPSNDGKVVRLTIPPLTEERRKELSKQVAKLAEEGRVS 124
Query: 740 LRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDTYMKKVEELCKQKEKEL 904
+RNIRRD + S K EK +LSED K L D+QKL D Y+KK++EL +KEKEL
Sbjct: 125 IRNIRRDGIDSVRKREKNGELSEDESKSLQDDIQKLTDRYIKKIDELLAEKEKEL 179
>sp|Q8DM64|RRF_THEEB Ribosome-recycling factor OS=Thermosynechococcus elongatus
(strain BP-1) GN=frr PE=3 SV=1
Length = 182
Score = 207 bits (525), Expect = 2e-052
Identities = 98/178 (55%), Positives = 136/178 (76%)
Frame = +2
Query: 380 DVKSKMERTIETLRTSFNSIRTGRANVAMLDKIEVEYYGSPVSLKSIAQISTPDGTSLLL 559
DV+ +M++++E + FNSIRTGRAN A+LD++ V+YYG+ L+S+A +STPD T++L+
Sbjct: 5 DVEERMQKSVEATQHDFNSIRTGRANAALLDRVMVDYYGTETPLRSLANVSTPDATTILI 64
Query: 560 QPYDKSSLKAIEKAIVSSDLGVTPNNDGDVIRLSLPPLTSERRKELTKVVAKQTEEGKVA 739
QPYD+S+L +IEKAI SDLG+TPNNDG +RL++PPLT+ERRKEL K AK E GKVA
Sbjct: 65 QPYDRSTLASIEKAIQLSDLGLTPNNDGSSVRLNIPPLTTERRKELVKTAAKIAEGGKVA 124
Query: 740 LRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDTYMKKVEELCKQKEKELLKV 913
+RNIRRDA+ K K +L+ED VKDL +QKL D Y+ K++ L +KEK+++ V
Sbjct: 125 IRNIRRDAIDHIKKAGKAGELTEDEVKDLQEKVQKLTDKYIGKIDALLAEKEKDIMTV 182
>sp|B7K7R4|RRF_CYAP7 Ribosome-recycling factor OS=Cyanothece sp. (strain PCC
7424) GN=frr PE=3 SV=1
Length = 182
Score = 206 bits (522), Expect = 4e-052
Identities = 98/178 (55%), Positives = 136/178 (76%)
Frame = +2
Query: 380 DVKSKMERTIETLRTSFNSIRTGRANVAMLDKIEVEYYGSPVSLKSIAQISTPDGTSLLL 559
+V+ M++TIE+ + SFN+IRTGRAN A+LD++ V+YYG+ LKS+A I+TPD T++ +
Sbjct: 5 EVQDNMQKTIESTQRSFNTIRTGRANSALLDRVMVDYYGTETPLKSLANITTPDATTIAI 64
Query: 560 QPYDKSSLKAIEKAIVSSDLGVTPNNDGDVIRLSLPPLTSERRKELTKVVAKQTEEGKVA 739
QPYD+ S+ IEKAI SD+G+TPNNDG +IRL++PPLT+ERRKEL K+ K EEGKVA
Sbjct: 65 QPYDRGSMGQIEKAIQLSDIGLTPNNDGQMIRLNIPPLTTERRKELVKLAGKLAEEGKVA 124
Query: 740 LRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDTYMKKVEELCKQKEKELLKV 913
+RNIRRDA+ S K EK +LSED ++L ++QK+ D Y K++EL KEK++ V
Sbjct: 125 IRNIRRDAIDSVRKQEKNHELSEDESRNLQDEIQKVTDEYTAKIDELLAAKEKDISTV 182
>sp|B8HL79|RRF_CYAP4 Ribosome-recycling factor OS=Cyanothece sp. (strain PCC
7425 / ATCC 29141) GN=frr PE=3 SV=1
Length = 182
Score = 205 bits (521), Expect = 5e-052
Identities = 98/178 (55%), Positives = 136/178 (76%)
Frame = +2
Query: 380 DVKSKMERTIETLRTSFNSIRTGRANVAMLDKIEVEYYGSPVSLKSIAQISTPDGTSLLL 559
DV+ M++++E + +FN+IRTGRAN ++LD++ VEYYG+ L+S+A ISTPD +++ +
Sbjct: 5 DVEDHMQKSVEATQRAFNTIRTGRANTSLLDRVTVEYYGAETPLRSLANISTPDSSTIAI 64
Query: 560 QPYDKSSLKAIEKAIVSSDLGVTPNNDGDVIRLSLPPLTSERRKELTKVVAKQTEEGKVA 739
QP+D++SL IEKAI SDLG+TPNNDG VIRL++PPLTS+RRKEL K +K EEGKV+
Sbjct: 65 QPFDRNSLNLIEKAISMSDLGLTPNNDGTVIRLNIPPLTSDRRKELVKTASKLAEEGKVS 124
Query: 740 LRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDTYMKKVEELCKQKEKELLKV 913
+RN+RRDA+ S K K +LSED VKDL +QKL D Y+ KV+ L +KEK++ V
Sbjct: 125 IRNVRRDAVDSVKKQGKAGELSEDEVKDLQDKIQKLTDKYIAKVDGLLAEKEKDISTV 182
>sp|B2IVW4|RRF_NOSP7 Ribosome-recycling factor OS=Nostoc punctiforme (strain
ATCC 29133 / PCC 73102) GN=frr PE=3 SV=1
Length = 182
Score = 205 bits (520), Expect = 7e-052
Identities = 96/178 (53%), Positives = 137/178 (76%)
Frame = +2
Query: 380 DVKSKMERTIETLRTSFNSIRTGRANVAMLDKIEVEYYGSPVSLKSIAQISTPDGTSLLL 559
D KSKM+ ++E+ + +FN+IRTGRAN ++LDK+ V+YYGSP LKS+A ISTPD +++L+
Sbjct: 5 DAKSKMQSSVESTQRAFNTIRTGRANASLLDKVLVDYYGSPTPLKSLANISTPDASTILI 64
Query: 560 QPYDKSSLKAIEKAIVSSDLGVTPNNDGDVIRLSLPPLTSERRKELTKVVAKQTEEGKVA 739
QPY++++L IEKAI SD+G+TP+NDG VIRL++PPLTS+RRKE K+ K EEG+VA
Sbjct: 65 QPYERNTLNIIEKAISLSDVGLTPSNDGSVIRLNIPPLTSDRRKEFVKMATKYAEEGRVA 124
Query: 740 LRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDTYMKKVEELCKQKEKELLKV 913
+RNIRRDA+ S K EK ++S+D KD +LQKL + Y +++ L +KEK++ V
Sbjct: 125 IRNIRRDAIDSIRKQEKASEISKDESKDQQDNLQKLTNEYTSRIDALLAEKEKDITTV 182
>sp|B1X0Q1|RRF_CYAA5 Ribosome-recycling factor OS=Cyanothece sp. (strain ATCC
51142) GN=frr PE=3 SV=1
Length = 182
Score = 204 bits (518), Expect = 1e-051
Identities = 95/178 (53%), Positives = 132/178 (74%)
Frame = +2
Query: 380 DVKSKMERTIETLRTSFNSIRTGRANVAMLDKIEVEYYGSPVSLKSIAQISTPDGTSLLL 559
D+K M++++E + SFN+IRTGRAN ++LD++ VEYYG+ L +A ISTPD T++++
Sbjct: 5 DLKENMQKSVEATQRSFNTIRTGRANASILDRVTVEYYGTETPLYQLANISTPDATTIMI 64
Query: 560 QPYDKSSLKAIEKAIVSSDLGVTPNNDGDVIRLSLPPLTSERRKELTKVVAKQTEEGKVA 739
QPYDK S+ IEKAI SD+G+TPNNDG VIRL++PPLT ERRK+L K+ +K EEGKVA
Sbjct: 65 QPYDKGSMGQIEKAIQMSDVGLTPNNDGQVIRLNIPPLTEERRKDLVKLASKMAEEGKVA 124
Query: 740 LRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDTYMKKVEELCKQKEKELLKV 913
+RNIRRDA+ K EK +SED + L D+QK+ D + K++EL KEK+++ V
Sbjct: 125 IRNIRRDAIDDVRKQEKNSDISEDESRGLQDDIQKVTDQFTDKIDELLAAKEKDIMTV 182
>sp|B0JKT7|RRF_MICAN Ribosome-recycling factor OS=Microcystis aeruginosa (strain
NIES-843) GN=frr PE=3 SV=1
Length = 182
Score = 203 bits (515), Expect = 3e-051
Identities = 96/178 (53%), Positives = 138/178 (77%)
Frame = +2
Query: 380 DVKSKMERTIETLRTSFNSIRTGRANVAMLDKIEVEYYGSPVSLKSIAQISTPDGTSLLL 559
+V+ +M++T+E+ + +FN+IRTGRAN ++LD+I VEYYG LKS+A ISTPD T++ +
Sbjct: 5 EVQDQMQKTVESTQRAFNTIRTGRANASLLDRIVVEYYGMETPLKSLATISTPDATTIAI 64
Query: 560 QPYDKSSLKAIEKAIVSSDLGVTPNNDGDVIRLSLPPLTSERRKELTKVVAKQTEEGKVA 739
QP+D++S+ AIEKAI SD+G+TP+NDG IRL++PPLTS+RRKEL K+ AK EEGKVA
Sbjct: 65 QPFDRTSMGAIEKAISLSDVGLTPSNDGQTIRLNIPPLTSDRRKELVKLAAKLAEEGKVA 124
Query: 740 LRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDTYMKKVEELCKQKEKELLKV 913
+RNIRRDA+ + K EK ++SED +DL +QK D ++ K+E+L KEK+++ V
Sbjct: 125 IRNIRRDAIDAIRKREKGHEISEDESRDLQDQVQKSTDKFIAKIEDLLTTKEKDIMTV 182
>sp|P74456|RRF_SYNY3 Ribosome-recycling factor OS=Synechocystis sp. (strain PCC
6803) GN=frr PE=3 SV=1
Length = 182
Score = 203 bits (514), Expect = 3e-051
Identities = 97/178 (54%), Positives = 132/178 (74%)
Frame = +2
Query: 380 DVKSKMERTIETLRTSFNSIRTGRANVAMLDKIEVEYYGSPVSLKSIAQISTPDGTSLLL 559
++K M++++E + SFN+IRTGRAN ++LD+I VEYYG+ LKS+A I TPD +++++
Sbjct: 5 ELKDHMQKSVEATQRSFNTIRTGRANASLLDRITVEYYGAETPLKSLATIGTPDASTIVI 64
Query: 560 QPYDKSSLKAIEKAIVSSDLGVTPNNDGDVIRLSLPPLTSERRKELTKVVAKQTEEGKVA 739
QP+D S+ IEKAI SDLG+TPNNDG VIRL++PPLT+ERRKEL KV K EEGKVA
Sbjct: 65 QPFDMGSIGTIEKAISLSDLGLTPNNDGKVIRLNIPPLTAERRKELVKVAGKLAEEGKVA 124
Query: 740 LRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDTYMKKVEELCKQKEKELLKV 913
+RNIRRDA+ K EK +SED +DL ++QKL D K+++EL KEK++ V
Sbjct: 125 IRNIRRDAVDEVRKQEKNSDISEDEARDLQEEIQKLTDQSTKRIDELLAAKEKDITTV 182
>sp|Q10Y49|RRF_TRIEI Ribosome-recycling factor OS=Trichodesmium erythraeum
(strain IMS101) GN=frr PE=3 SV=1
Length = 182
Score = 201 bits (509), Expect = 1e-050
Identities = 95/179 (53%), Positives = 132/179 (73%)
Frame = +2
Query: 377 KDVKSKMERTIETLRTSFNSIRTGRANVAMLDKIEVEYYGSPVSLKSIAQISTPDGTSLL 556
K+ + KM++ IE + SFN++RTGRAN ++LD++ VEYYGSP LKS+A I PD +++
Sbjct: 4 KEAEEKMQKAIEATKNSFNTVRTGRANASLLDRVMVEYYGSPTQLKSMANIGIPDASTIT 63
Query: 557 LQPYDKSSLKAIEKAIVSSDLGVTPNNDGDVIRLSLPPLTSERRKELTKVVAKQTEEGKV 736
+QPYDK+SL IEKAI SD+G+TPNNDG +IRL++P LT+ERR+E+ K AK EEGKV
Sbjct: 64 IQPYDKTSLGLIEKAINMSDVGLTPNNDGSIIRLNIPALTAERRQEMVKKTAKLAEEGKV 123
Query: 737 ALRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDTYMKKVEELCKQKEKELLKV 913
++RNIRRDA+ S K EK +S+D +DL +QK D Y+ K++EL KEK++ V
Sbjct: 124 SIRNIRRDAVDSIRKQEKNSDISKDESRDLQDKVQKKTDKYIAKIDELLAAKEKDMTTV 182
>sp|A9BEE4|RRF_PROM4 Ribosome-recycling factor OS=Prochlorococcus marinus
(strain MIT 9211) GN=frr PE=3 SV=1
Length = 182
Score = 200 bits (508), Expect = 2e-050
Identities = 95/181 (52%), Positives = 135/181 (74%)
Frame = +2
Query: 371 IEKDVKSKMERTIETLRTSFNSIRTGRANVAMLDKIEVEYYGSPVSLKSIAQISTPDGTS 550
I K+++ M +++E + +FN+IRTGRAN ++LD++ VEYYG+ LKS+A ISTPD +
Sbjct: 2 ITKELEQNMRKSVEAAQRNFNTIRTGRANTSLLDRLTVEYYGADTPLKSLATISTPDSQT 61
Query: 551 LLLQPYDKSSLKAIEKAIVSSDLGVTPNNDGDVIRLSLPPLTSERRKELTKVVAKQTEEG 730
+ +QP+D SSL IEK+I SDLG TPNNDG +IR+++PPLT ERRKE K+ +K EEG
Sbjct: 62 ISIQPFDLSSLVLIEKSIAMSDLGFTPNNDGKIIRINIPPLTEERRKEFCKLASKYAEEG 121
Query: 731 KVALRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDTYMKKVEELCKQKEKELLK 910
KVALRNIRRDA++ K EKE ++SED +D ++QKL D ++ ++E+ KE+E+LK
Sbjct: 122 KVALRNIRRDAIERIKKSEKESEISEDQSRDEQDNVQKLTDRFITEIEKNLSDKEQEILK 181
Query: 911 V 913
V
Sbjct: 182 V 182
>sp|B1XJ13|RRF_SYNP2 Ribosome-recycling factor OS=Synechococcus sp. (strain ATCC
27264 / PCC 7002 / PR-6) GN=frr PE=3 SV=1
Length = 182
Score = 199 bits (504), Expect = 5e-050
Identities = 93/178 (52%), Positives = 132/178 (74%)
Frame = +2
Query: 380 DVKSKMERTIETLRTSFNSIRTGRANVAMLDKIEVEYYGSPVSLKSIAQISTPDGTSLLL 559
+++ M++TIE + SFN++RTGRA+ ++LD+I VEYYG+ LKS+A ISTPD +++++
Sbjct: 5 ELRENMQKTIEATQRSFNTLRTGRASASLLDRITVEYYGAETPLKSLASISTPDSSTIMI 64
Query: 560 QPYDKSSLKAIEKAIVSSDLGVTPNNDGDVIRLSLPPLTSERRKELTKVVAKQTEEGKVA 739
QP+D+ SL +E+AI SDLG+TPNNDG IRL++PPLT ERR+EL K K EEGKVA
Sbjct: 65 QPFDRGSLSDVERAISMSDLGLTPNNDGTNIRLNIPPLTKERRQELVKTAGKLAEEGKVA 124
Query: 740 LRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDTYMKKVEELCKQKEKELLKV 913
LRNIRRDA+ K EK +SED + L D+QK+ D + K+++L K KEK+++ V
Sbjct: 125 LRNIRRDAIDDVRKQEKNSDISEDESRSLQDDIQKVTDEFTTKIDDLLKIKEKDIMTV 182
>sp|Q7V6C1|RRF_PROMM Ribosome-recycling factor OS=Prochlorococcus marinus
(strain MIT 9313) GN=frr PE=3 SV=1
Length = 182
Score = 197 bits (500), Expect = 1e-049
Identities = 93/179 (51%), Positives = 133/179 (74%)
Frame = +2
Query: 377 KDVKSKMERTIETLRTSFNSIRTGRANVAMLDKIEVEYYGSPVSLKSIAQISTPDGTSLL 556
+++K M +++E + +F +IRTGRAN ++LD+I VEYYG+ LKS+A ISTPD ++
Sbjct: 4 QELKDNMHKSVEATQRNFATIRTGRANPSLLDRINVEYYGTETPLKSLATISTPDSQTIA 63
Query: 557 LQPYDKSSLKAIEKAIVSSDLGVTPNNDGDVIRLSLPPLTSERRKELTKVVAKQTEEGKV 736
+QP+D S+ IEKAI +SDLG+TPNNDG +IR+++PPLT ERRKE K+ A+ EEGKV
Sbjct: 64 IQPFDNGSMGLIEKAIATSDLGLTPNNDGKIIRINVPPLTEERRKEFCKLAARYAEEGKV 123
Query: 737 ALRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDTYMKKVEELCKQKEKELLKV 913
ALRNIRRDA+ KLEK+ +LS+D D +QKL DT++ ++E+ +KE ++LKV
Sbjct: 124 ALRNIRRDAIDKVKKLEKDAELSKDQSHDEQDGIQKLTDTFITEIEKYLAEKEADILKV 182
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,889,068,748
Number of Sequences: 518415
Number of Extensions: 64889068748
Number of Successful Extensions: 459589147
Number of sequences better than 0.0: 0
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