BLASTX 7.6.2
Query= UN16110 /QuerySize=1192
(1191 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G63190.1 | Symbols: RRF | RRF (RIBOSOME RECYCL... 441 7e-124
TAIR9_protein||AT3G01800.1 | Symbols: | ribosome recycling fact... 118 8e-027
>TAIR9_protein||AT3G63190.1 | Symbols: RRF | RRF (RIBOSOME RECYCLING FACTOR,
CHLOROPLAST PRECURSOR) | chr3:23342861-23344640 REVERSE
Length = 276
Score = 441 bits (1132), Expect = 7e-124
Identities = 235/277 (84%), Positives = 254/277 (91%), Gaps = 1/277 (0%)
Frame = +2
Query: 86 MAASLSSNAQTTPILRFRASDSKSLVSPPGSCLRVMASNNASSARAIACSLRSDNPWLGA 265
MAAS SS A TTP+LRFRA+ SK L+S P SCLR+++S + S R IACS ++D LGA
Sbjct: 1 MAASFSSTAPTTPVLRFRANYSKPLLSLPDSCLRIISSAISPSTRLIACSFKTDKLPLGA 60
Query: 266 GVKLSGGGPVVKRSLQKRVVIRSATIEEIEAEKSAIEKDVKSKMERTIETLRTSFNSIRT 445
GV LS GGPVVKRSLQKR+VIRSATIEEIEAEKSAIE DVKSKME+TIETLRTSFNSIRT
Sbjct: 61 GVNLS-GGPVVKRSLQKRLVIRSATIEEIEAEKSAIETDVKSKMEKTIETLRTSFNSIRT 119
Query: 446 GRANVAMLDKIEVEYYGSPVSLKSIAQISTPDGTSLLLQPYDKSSLKAIEKAIVSSDLGV 625
GR+N AMLDKIEVEYYGSPVSLKSIAQISTPDG+SLLLQPYDKSSLKAIEKAIV+SDLGV
Sbjct: 120 GRSNAAMLDKIEVEYYGSPVSLKSIAQISTPDGSSLLLQPYDKSSLKAIEKAIVNSDLGV 179
Query: 626 TPNNDGDVIRLSLPPLTSERRKELTKVVAKQTEEGKVALRNIRRDALKSYDKLEKEKKLS 805
TPNNDGDVIRLSLPPLTS+RRKEL+KVVAKQ+EEGKVALRNIRRDALKSYDKLEKEKKLS
Sbjct: 180 TPNNDGDVIRLSLPPLTSDRRKELSKVVAKQSEEGKVALRNIRRDALKSYDKLEKEKKLS 239
Query: 806 EDNVKDLSSDLQKLIDTYMKKVEELCKQKEKELLKV* 916
EDNVKDLSSDLQKLID YMKK+EEL KQKEKEL+KV*
Sbjct: 240 EDNVKDLSSDLQKLIDVYMKKIEELYKQKEKELMKV* 276
>TAIR9_protein||AT3G01800.1 | Symbols: | ribosome recycling factor family
protein / ribosome releasing factor family protein | chr3:286020-287543
FORWARD
Length = 268
Score = 118 bits (295), Expect = 8e-027
Identities = 66/182 (36%), Positives = 101/182 (55%), Gaps = 2/182 (1%)
Frame = +2
Query: 371 IEKDVKSKMERTIETLRTSFNSIRTGRANVAMLDKIEVEYYGSPVSLKSIAQISTPDGTS 550
++ S+ME I+ L +RTGRA MLD I VE G + L +A +S D +
Sbjct: 89 VKAAASSQMEAAIDALSRDLTKLRTGRAAPGMLDHIVVETGGVKMPLNHLALVSVLDPKT 148
Query: 551 LLLQPYDKSSLKAIEKAIVSSDLGVTPNNDGDVIRLSLPPLTSERRKELTKVVAKQTEEG 730
L + PYD ++K +EKAIV+S LG+ P DG + S+P LT E + + K+V K +E
Sbjct: 149 LSVNPYDPDTVKELEKAIVASPLGLNPKLDGQRLVASIPALTKEHIQAMCKIVTKSSEVV 208
Query: 731 KVALRNIRRDALKSYDKLEKEKKLSEDNVKDLSSDLQKLIDTYMKKVEELCKQKEKELLK 910
K ++R R+ AL + K L +D VK L ++ +L ++K E++CK KEKE+ +
Sbjct: 209 KQSIRRARQKALDTIKK--AGSSLPKDEVKRLEKEVDELTKKFVKSAEDMCKSKEKEITE 266
Query: 911 V* 916
*
Sbjct: 267 A* 268
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,463,037,472
Number of Sequences: 33410
Number of Extensions: 8463037472
Number of Successful Extensions: 300900582
Number of sequences better than 0.0: 0
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