BLASTX 7.6.2
Query= UN16124 /QuerySize=798
(797 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G55680.1 | Symbols: | WD-40 repeat family pro... 303 1e-082
TAIR9_protein||AT3G13340.1 | Symbols: | WD-40 repeat family pro... 292 3e-079
TAIR9_protein||AT5G56190.1 | Symbols: | WD-40 repeat family pro... 226 2e-059
TAIR9_protein||AT5G56190.2 | Symbols: | WD-40 repeat family pro... 225 3e-059
TAIR9_protein||AT1G78070.1 | Symbols: | FUNCTIONS IN: molecular... 150 1e-036
TAIR9_protein||AT1G36070.1 | Symbols: | WD-40 repeat family pro... 132 4e-031
>TAIR9_protein||AT1G55680.1 | Symbols: | WD-40 repeat family protein |
chr1:20804988-20807294 REVERSE
Length = 446
Score = 303 bits (774), Expect = 1e-082
Identities = 149/177 (84%), Positives = 161/177 (90%), Gaps = 6/177 (3%)
Frame = +1
Query: 232 DDDDDMEDVD-----DDLDDDFHGDDMAASDSDVDEFDYSSNKIADTSAEQARKGKDIQG 396
DD + MEDVD DDLD+DF GDDMAASDSDVDEFDYS+NKIADTSA+QARKGKDIQG
Sbjct: 7 DDAEYMEDVDDEMDEDDLDEDFRGDDMAASDSDVDEFDYSNNKIADTSADQARKGKDIQG 66
Query: 397 IPWDRLSITREKYRQTRLDQYKNYENVPNSGDSSGKDCMVTQKGAIFYDFWRNSRSIKSS 576
IPWDRLSITRE YRQTRL+QYKNYENVPNSG+SSGKDCM TQKGA+FYDFWRN+RSIKSS
Sbjct: 67 IPWDRLSITRETYRQTRLEQYKNYENVPNSGESSGKDCMATQKGALFYDFWRNTRSIKSS 126
Query: 577 ILHFQLRNLVWATSKHDVYLMSQFLVSHYSTLTCGKHEVLNVQ-VMFPIREHPGSLL 744
ILHFQLRNLVWATSKHDVYLMSQ+LVSHYSTLT GKH+VLNVQ + P +HPGSLL
Sbjct: 127 ILHFQLRNLVWATSKHDVYLMSQYLVSHYSTLTSGKHDVLNVQGHVSPSEKHPGSLL 183
>TAIR9_protein||AT3G13340.1 | Symbols: | WD-40 repeat family protein |
chr3:4332370-4334603 FORWARD
Length = 448
Score = 292 bits (745), Expect = 3e-079
Identities = 137/176 (77%), Positives = 161/176 (91%), Gaps = 1/176 (0%)
Frame = +1
Query: 220 DHVVDDDDDMEDVDDDLDDDFHGDDMAASDSDVDEFDYSSNKIADTSAEQARKGKDIQGI 399
+++ D DD+MEDV+DD+D++F GDD+ ASDSDV+EFDYS+NK+ADT+AEQARKGKDIQGI
Sbjct: 10 EYMEDVDDEMEDVEDDMDEEFRGDDLGASDSDVEEFDYSNNKVADTTAEQARKGKDIQGI 69
Query: 400 PWDRLSITREKYRQTRLDQYKNYENVPNSGDSSGKDCMVTQKGAIFYDFWRNSRSIKSSI 579
PWDRL+I+REKYRQTRL+QYKNYENVPNSG+SS K C VTQKG +FYDFWRNSRSIKS+I
Sbjct: 70 PWDRLNISREKYRQTRLEQYKNYENVPNSGESSEKVCKVTQKGGLFYDFWRNSRSIKSTI 129
Query: 580 LHFQLRNLVWATSKHDVYLMSQFLVSHYSTLTCGKHEVLNVQ-VMFPIREHPGSLL 744
LHFQLRNLVWATSKHDVYLMS FLV+HYS+LT GKHEVLNV+ + P +HPGSLL
Sbjct: 130 LHFQLRNLVWATSKHDVYLMSNFLVTHYSSLTSGKHEVLNVRGHVAPSEKHPGSLL 185
>TAIR9_protein||AT5G56190.1 | Symbols: | WD-40 repeat family protein |
chr5:22742563-22744909 FORWARD
Length = 442
Score = 226 bits (574), Expect = 2e-059
Identities = 110/179 (61%), Positives = 143/179 (79%), Gaps = 2/179 (1%)
Frame = +1
Query: 211 AYMDHVVDDDDDMEDVDDDLDDDFHGDDMAASDSDVDEFDYSSNKIADTSAEQARKGKDI 390
A D + D+ DM+D++DD++ F G D+ ASDS+V++FD NK ADTSA QAR GKDI
Sbjct: 2 ADFDEYMADEYDMDDLEDDMNAAFDGRDIDASDSEVEDFD-QLNKAADTSAAQARNGKDI 60
Query: 391 QGIPWDRLSITREKYRQTRLDQYKNYENVPNSGDSSGKDCMVTQKGAIFYDFWRNSRSIK 570
QGIPWD L++TR+ YR+TRL+QYKNYEN+PNSGD S K CM T+KG+ FY+F RNSRS++
Sbjct: 61 QGIPWDSLTLTRKDYRKTRLEQYKNYENIPNSGDESAKKCMNTEKGSSFYEFRRNSRSVR 120
Query: 571 SSILHFQLRNLVWATSKHDVYLMSQFLVSHYSTLTCGKHEVLNVQ-VMFPIREHPGSLL 744
S+ILHFQLRNLVWATSKHDVYL+S + +SH+S+LT + E+LNV+ + P +HP SLL
Sbjct: 121 STILHFQLRNLVWATSKHDVYLLSNYSISHWSSLTGCRSEILNVKGHVAPSEKHPESLL 179
>TAIR9_protein||AT5G56190.2 | Symbols: | WD-40 repeat family protein |
chr5:22742654-22744909 FORWARD
Length = 448
Score = 225 bits (573), Expect = 3e-059
Identities = 109/176 (61%), Positives = 142/176 (80%), Gaps = 2/176 (1%)
Frame = +1
Query: 220 DHVVDDDDDMEDVDDDLDDDFHGDDMAASDSDVDEFDYSSNKIADTSAEQARKGKDIQGI 399
D + D+ DM+D++DD++ F G D+ ASDS+V++FD NK ADTSA QAR GKDIQGI
Sbjct: 11 DEYMADEYDMDDLEDDMNAAFDGRDIDASDSEVEDFD-QLNKAADTSAAQARNGKDIQGI 69
Query: 400 PWDRLSITREKYRQTRLDQYKNYENVPNSGDSSGKDCMVTQKGAIFYDFWRNSRSIKSSI 579
PWD L++TR+ YR+TRL+QYKNYEN+PNSGD S K CM T+KG+ FY+F RNSRS++S+I
Sbjct: 70 PWDSLTLTRKDYRKTRLEQYKNYENIPNSGDESAKKCMNTEKGSSFYEFRRNSRSVRSTI 129
Query: 580 LHFQLRNLVWATSKHDVYLMSQFLVSHYSTLTCGKHEVLNVQ-VMFPIREHPGSLL 744
LHFQLRNLVWATSKHDVYL+S + +SH+S+LT + E+LNV+ + P +HP SLL
Sbjct: 130 LHFQLRNLVWATSKHDVYLLSNYSISHWSSLTGCRSEILNVKGHVAPSEKHPESLL 185
>TAIR9_protein||AT1G78070.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING
ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986),
WD40/YVTN repeat-like (InterPro:IPR015943), WD40 repeat
(InterPro:IPR001680); BEST Arabidopsis thaliana protein match is: WD-40
repeat family protein (TAIR:AT1G36070.1); Has 110 Blast hits to 110
proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
28; Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink). | chr1:29355219-29358368 FORWARD
Length = 450
Score = 150 bits (378), Expect = 1e-036
Identities = 83/182 (45%), Positives = 117/182 (64%), Gaps = 13/182 (7%)
Frame = +1
Query: 235 DDDDMEDVDDDLDDDFHGDDM-----AASDSDVD------EFDYSSNKI-ADTSAEQARK 378
D+ D+E + D+ DF D+ S+SD D +F+ S +K +TSA +AR
Sbjct: 5 DNSDLEYLVDEFHADFDDDEPFGEVDVTSESDSDFMDSDFDFELSESKTNNETSALEARN 64
Query: 379 GKDIQGIPWDRLSITREKYRQTRLDQYKNYENVPNSGDSSGKDCMVTQKGAIFYDFWRNS 558
GKDIQGIPW+ L+ TR++YR+ RL YKN+E++ S + K+C+ +KG FYDF N+
Sbjct: 65 GKDIQGIPWESLNYTRDRYRENRLLHYKNFESLFRSREELDKECLQVEKGKNFYDFQFNT 124
Query: 559 RSIKSSILHFQLRNLVWATSKHDVYLMSQFLVSHYSTLTCGKHEVLNV-QVMFPIREHPG 735
R +KS+I HFQLRNLVWATSKHDVY M+ + + H+S+L EVLNV + + P + G
Sbjct: 125 RLVKSTIAHFQLRNLVWATSKHDVYFMNNYSLMHWSSLLQRGKEVLNVAKPIVPSMKQHG 184
Query: 736 SL 741
SL
Sbjct: 185 SL 186
>TAIR9_protein||AT1G36070.1 | Symbols: | WD-40 repeat family protein |
chr1:13467164-13470386 REVERSE
Length = 419
Score = 132 bits (330), Expect = 4e-031
Identities = 70/152 (46%), Positives = 99/152 (65%), Gaps = 4/152 (2%)
Frame = +1
Query: 292 DMAASDSDVDEFDYSSNKIADTSAEQARKGKDIQGIPWDRLSITREKYRQTRLDQYKNYE 471
+ DSD ++ + DTSA++AR GKDIQGI W+ R+++R+TRL QY N+
Sbjct: 2 EQTKDDSDFEDDCETKKMETDTSAQEARNGKDIQGIQWEGFKYNRDEFRETRLKQYDNFV 61
Query: 472 NV--PNSGDSSGKD-CMVTQKGAIFYDFWRNSRSIKSSILHFQLRNLVWATSKHDVYLMS 642
N+ P+S + K+ V +KG FYDF N+R + S+I+HFQLRNLVWATSKHDVYLM
Sbjct: 62 NILRPSSREKLDKEHGQVVEKGKNFYDFQFNTRLVTSTIVHFQLRNLVWATSKHDVYLMQ 121
Query: 643 QFLVSHYSTLTCGKHEVLNV-QVMFPIREHPG 735
+ + H+S+L EVLNV + + P ++ PG
Sbjct: 122 NYSLMHWSSLLQRGKEVLNVARSVTPTQKLPG 153
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,463,037,472
Number of Sequences: 33410
Number of Extensions: 8463037472
Number of Successful Extensions: 300900582
Number of sequences better than 0.0: 0
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