BLASTX 7.6.2
Query= UN16127 /QuerySize=1009
(1008 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9SYL9|RK13_ARATH 50S ribosomal protein L13, chloroplastic OS... 433 2e-120
sp|P12629|RK13_SPIOL 50S ribosomal protein L13, chloroplastic OS... 312 2e-084
sp|Q3MF94|RL13_ANAVT 50S ribosomal protein L13 OS=Anabaena varia... 197 1e-049
sp|Q8DMK8|RL13_THEEB 50S ribosomal protein L13 OS=Thermosynechoc... 197 1e-049
sp|Q8YPK6|RL13_ANASP 50S ribosomal protein L13 OS=Anabaena sp. (... 195 4e-049
sp|Q6H001|RL13_FREDI 50S ribosomal protein L13 OS=Fremyella dipl... 192 5e-048
sp|B1WQT8|RL13_CYAA5 50S ribosomal protein L13 OS=Cyanothece sp.... 189 3e-047
sp|B8HMT1|RL13_CYAP4 50S ribosomal protein L13 OS=Cyanothece sp.... 186 2e-046
sp|B7K221|RL13_CYAP8 50S ribosomal protein L13 OS=Cyanothece sp.... 186 3e-046
sp|B1XJI1|RL13_SYNP2 50S ribosomal protein L13 OS=Synechococcus ... 186 3e-046
sp|B0JY35|RL13_MICAN 50S ribosomal protein L13 OS=Microcystis ae... 184 1e-045
sp|Q0ID31|RL13_SYNS3 50S ribosomal protein L13 OS=Synechococcus ... 181 8e-045
sp|B0C427|RL13_ACAM1 50S ribosomal protein L13 OS=Acaryochloris ... 180 1e-044
sp|Q31L33|RL13_SYNE7 50S ribosomal protein L13 OS=Synechococcus ... 180 1e-044
sp|Q5N0T9|RL13_SYNP6 50S ribosomal protein L13 OS=Synechococcus ... 180 1e-044
sp|Q3AW67|RL13_SYNS9 50S ribosomal protein L13 OS=Synechococcus ... 180 1e-044
sp|B7KI14|RL13_CYAP7 50S ribosomal protein L13 OS=Cyanothece sp.... 179 3e-044
sp|Q1XDJ6|RK13_PORYE 50S ribosomal protein L13, chloroplastic OS... 178 7e-044
sp|A2BYR0|RL13_PROM5 50S ribosomal protein L13 OS=Prochlorococcu... 178 9e-044
sp|P73294|RL13_SYNY3 50S ribosomal protein L13 OS=Synechocystis ... 178 9e-044
>sp|Q9SYL9|RK13_ARATH 50S ribosomal protein L13, chloroplastic OS=Arabidopsis
thaliana GN=RPL13 PE=1 SV=1
Length = 241
Score = 433 bits (1111), Expect = 2e-120
Identities = 213/241 (88%), Positives = 225/241 (93%), Gaps = 5/241 (2%)
Frame = +2
Query: 92 SSTVIQLPSSSVKTSGCDRRSPFLGFSLNAISKPQVRIATNANTKRGVQVKCEAEQATTI 271
SS+ + L SSSVK+SG +R+SPFLGFSL AISKP VR+ AN+KRG+QVKCEAE
Sbjct: 6 SSSTVILSSSSVKSSGSERKSPFLGFSLTAISKPSVRVGIYANSKRGLQVKCEAE----- 60
Query: 272 TTTTSSLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPWYVVDATDKILGRLAS 451
TTT+SLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPW+VVDATDKILGRLAS
Sbjct: 61 PTTTTSLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPWFVVDATDKILGRLAS 120
Query: 452 TIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVETFD 631
TIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVETFD
Sbjct: 121 TIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVETFD 180
Query: 632 QLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPLDLPIRDKRIQL* 811
QLQQRIPERI+EHAVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPLDLPIRDKRIQL
Sbjct: 181 QLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPLDLPIRDKRIQLQ 240
Query: 812 K 814
K
Sbjct: 241 K 241
>sp|P12629|RK13_SPIOL 50S ribosomal protein L13, chloroplastic OS=Spinacia
oleracea GN=RPL13 PE=1 SV=1
Length = 250
Score = 312 bits (799), Expect = 2e-084
Identities = 162/250 (64%), Positives = 187/250 (74%), Gaps = 12/250 (4%)
Frame = +2
Query: 86 CSSSTVIQLPSSSVKTS--GCD-RRSPFLGFSLNAISKPQVRIATNANTKRGVQVKCEAE 256
C+SS + PS+ + S G + +++P L F ++ +A +A KC E
Sbjct: 6 CASS--LTFPSAQTQKSFFGTNVKQTPVLSFPRPTVA---AAVAVSARKSTSASTKCTEE 60
Query: 257 QATTITTTTSSL----VPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPWYVVDAT 424
VP +QRWMF EEA GPDIWNTTWYPK++DHV TDK WYVVDAT
Sbjct: 61 WRQLKEAVKKEFAIPHVPLDQRWMFTLEEATGPDIWNTTWYPKSADHVPTDKKWYVVDAT 120
Query: 425 DKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRP 604
D ILGR+ASTIA HIRGKNLASYTPSVDMGAFVIVVNA+KVAVSGKKR QKLYRRHSGRP
Sbjct: 121 DLILGRMASTIAIHIRGKNLASYTPSVDMGAFVIVVNADKVAVSGKKRTQKLYRRHSGRP 180
Query: 605 GGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPLDLP 784
GG+ ETFDQLQ+RIPERIIEHAVRGMLPKGRLGR LFNHLKVYKG EHPH+AQ+P+DLP
Sbjct: 181 GGLKEETFDQLQKRIPERIIEHAVRGMLPKGRLGRYLFNHLKVYKGAEHPHQAQQPIDLP 240
Query: 785 IRDKRIQL*K 814
+RDKRI++ K
Sbjct: 241 LRDKRIRVEK 250
>sp|Q3MF94|RL13_ANAVT 50S ribosomal protein L13 OS=Anabaena variabilis (strain
ATCC 29413 / PCC 7937) GN=rplM PE=3 SV=1
Length = 151
Score = 197 bits (499), Expect = 1e-049
Identities = 96/131 (73%), Positives = 108/131 (82%)
Frame = +2
Query: 395 DKPWYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQ 574
++ WYVVDATDK LGRLAS IA +RGKN A YTP +D G FVIVVNAEKVAV+GKKR Q
Sbjct: 13 ERDWYVVDATDKRLGRLASEIAMILRGKNKAHYTPHLDTGDFVIVVNAEKVAVTGKKRTQ 72
Query: 575 KLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHP 754
KLYRRHSGRPGGM ETF +LQQR+PERI+EHAV+GMLPK LG+ LF LKVY GP HP
Sbjct: 73 KLYRRHSGRPGGMKTETFAKLQQRLPERIVEHAVKGMLPKNSLGKQLFTKLKVYAGPTHP 132
Query: 755 HEAQKPLDLPI 787
H+AQKP +L I
Sbjct: 133 HDAQKPKELNI 143
>sp|Q8DMK8|RL13_THEEB 50S ribosomal protein L13 OS=Thermosynechococcus elongatus
(strain BP-1) GN=rplM PE=3 SV=1
Length = 152
Score = 197 bits (499), Expect = 1e-049
Identities = 95/128 (74%), Positives = 106/128 (82%)
Frame = +2
Query: 404 WYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLY 583
WYV+DA D+ LGRLA+ IA +RGKN A YTP +D G FVIV+NAEKV V+GKKR+QKLY
Sbjct: 19 WYVIDAADQRLGRLAAEIARILRGKNKAIYTPHMDTGDFVIVINAEKVTVTGKKRSQKLY 78
Query: 584 RRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEA 763
RRHSGRPGGM +ETFDQLQ RIPERIIEHAV+GMLPK LGR LF LKVY GPEHPH+A
Sbjct: 79 RRHSGRPGGMKIETFDQLQARIPERIIEHAVKGMLPKNSLGRKLFTKLKVYAGPEHPHQA 138
Query: 764 QKPLDLPI 787
QKP L I
Sbjct: 139 QKPQPLTI 146
>sp|Q8YPK6|RL13_ANASP 50S ribosomal protein L13 OS=Anabaena sp. (strain PCC
7120) GN=rplM PE=3 SV=1
Length = 151
Score = 195 bits (495), Expect = 4e-049
Identities = 95/131 (72%), Positives = 108/131 (82%)
Frame = +2
Query: 395 DKPWYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQ 574
++ WYVVDATDK LGRLAS IA +RGKN A YTP +D G FVIVVNA+KVAV+GKKR Q
Sbjct: 13 ERDWYVVDATDKRLGRLASEIAMILRGKNKAHYTPHLDTGDFVIVVNAKKVAVTGKKRTQ 72
Query: 575 KLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHP 754
KLYRRHSGRPGGM ETF +LQQR+PERI+EHAV+GMLPK LG+ LF LKVY GP HP
Sbjct: 73 KLYRRHSGRPGGMKTETFAKLQQRLPERIVEHAVKGMLPKNSLGKQLFTKLKVYAGPTHP 132
Query: 755 HEAQKPLDLPI 787
H+AQKP +L I
Sbjct: 133 HDAQKPKELNI 143
>sp|Q6H001|RL13_FREDI 50S ribosomal protein L13 OS=Fremyella diplosiphon GN=rplM
PE=3 SV=2
Length = 151
Score = 192 bits (486), Expect = 5e-048
Identities = 91/131 (69%), Positives = 106/131 (80%)
Frame = +2
Query: 395 DKPWYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQ 574
++ WY+VDATD+ LGRLAS IA +RGK A YTP +D G FVIV+NAEK+AV+GKKR Q
Sbjct: 13 EREWYIVDATDQRLGRLASEIAMVLRGKKKAEYTPHLDTGDFVIVINAEKIAVTGKKRTQ 72
Query: 575 KLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHP 754
KLYRRHSGRPGGM ETF +LQQRIPERI+EHAV+GMLPK LG+ LF LKVY GP HP
Sbjct: 73 KLYRRHSGRPGGMKTETFAKLQQRIPERIVEHAVKGMLPKNSLGKQLFTKLKVYAGPTHP 132
Query: 755 HEAQKPLDLPI 787
H AQKP +L +
Sbjct: 133 HAAQKPKELKV 143
>sp|B1WQT8|RL13_CYAA5 50S ribosomal protein L13 OS=Cyanothece sp. (strain ATCC
51142) GN=rplM PE=3 SV=1
Length = 151
Score = 189 bits (479), Expect = 3e-047
Identities = 88/131 (67%), Positives = 107/131 (81%)
Frame = +2
Query: 395 DKPWYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQ 574
D+ WYV+DATD+ LGRLA +A +RGKN +YTP +D G FVI++NA+KVAV+G+K Q
Sbjct: 13 DQKWYVIDATDQRLGRLACEVAKILRGKNKPTYTPHMDTGDFVIIINADKVAVTGRKSTQ 72
Query: 575 KLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHP 754
KLYRRHSGRPGGM +ETF++LQQRIPERIIE AV+GMLPK LGR LF LKVY GP HP
Sbjct: 73 KLYRRHSGRPGGMKIETFEKLQQRIPERIIEKAVKGMLPKNALGRQLFTKLKVYPGPNHP 132
Query: 755 HEAQKPLDLPI 787
H+AQKP +L +
Sbjct: 133 HQAQKPEELTL 143
>sp|B8HMT1|RL13_CYAP4 50S ribosomal protein L13 OS=Cyanothece sp. (strain PCC
7425 / ATCC 29141) GN=rplM PE=3 SV=1
Length = 149
Score = 186 bits (472), Expect = 2e-046
Identities = 91/129 (70%), Positives = 105/129 (81%)
Frame = +2
Query: 404 WYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLY 583
WYVVDAT++ LGRLA+ IA +RGK YTPS+D G FVIVVNAEKVAV+GKKR QK+Y
Sbjct: 16 WYVVDATEQHLGRLATQIAMILRGKTKPIYTPSMDTGDFVIVVNAEKVAVTGKKRTQKIY 75
Query: 584 RRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEA 763
RRHSGRPGGM ETF +LQ R+PERIIEHAV+GMLPK LGR LF LKVY GP+HPH+A
Sbjct: 76 RRHSGRPGGMKTETFAKLQSRLPERIIEHAVKGMLPKNTLGRNLFTKLKVYAGPDHPHQA 135
Query: 764 QKPLDLPIR 790
QKP L ++
Sbjct: 136 QKPEVLTLK 144
>sp|B7K221|RL13_CYAP8 50S ribosomal protein L13 OS=Cyanothece sp. (strain PCC
8801) GN=rplM PE=3 SV=1
Length = 151
Score = 186 bits (471), Expect = 3e-046
Identities = 86/126 (68%), Positives = 104/126 (82%)
Frame = +2
Query: 395 DKPWYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQ 574
D+ WYV+DA D+ LGRLAS +A +RGKN ++TP +D G FVI+VNAEKV V+GKK +Q
Sbjct: 13 DQKWYVIDAADQRLGRLASEVAQILRGKNKPTFTPHMDTGDFVIIVNAEKVVVTGKKSSQ 72
Query: 575 KLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHP 754
KLYRRHSGRPGGM VETF++LQ R+PERI+EHAV+GMLPK LGR LF LKVY GP HP
Sbjct: 73 KLYRRHSGRPGGMKVETFEKLQARLPERIVEHAVKGMLPKNSLGRKLFTKLKVYTGPTHP 132
Query: 755 HEAQKP 772
H+AQ+P
Sbjct: 133 HQAQQP 138
>sp|B1XJI1|RL13_SYNP2 50S ribosomal protein L13 OS=Synechococcus sp. (strain
ATCC 27264 / PCC 7002 / PR-6) GN=rplM PE=3 SV=1
Length = 151
Score = 186 bits (470), Expect = 3e-046
Identities = 93/131 (70%), Positives = 103/131 (78%)
Frame = +2
Query: 395 DKPWYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQ 574
D+ WYVVDA D+ LGRLAS +A +RGKN A YTP +D G FVIVVNAEKV V+G+K Q
Sbjct: 13 DQKWYVVDAADQRLGRLASEVAKVLRGKNKAEYTPHMDTGDFVIVVNAEKVVVTGRKPEQ 72
Query: 575 KLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHP 754
KLYRRHSGRPGGM VETF+QLQ RIPERIIE AV+GMLPK LGR LF LKVY G EHP
Sbjct: 73 KLYRRHSGRPGGMKVETFNQLQDRIPERIIEKAVKGMLPKNALGRRLFTKLKVYAGTEHP 132
Query: 755 HEAQKPLDLPI 787
H AQ+P L I
Sbjct: 133 HAAQQPEVLTI 143
>sp|B0JY35|RL13_MICAN 50S ribosomal protein L13 OS=Microcystis aeruginosa
(strain NIES-843) GN=rplM PE=3 SV=1
Length = 151
Score = 184 bits (465), Expect = 1e-045
Identities = 89/131 (67%), Positives = 107/131 (81%)
Frame = +2
Query: 395 DKPWYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQ 574
++ WYV+DA D+ LGRLA+ IA +RGKN A++TP +D G FVIV+NAEKV V+GKKR Q
Sbjct: 13 EQKWYVIDAADQRLGRLATEIAMILRGKNKATFTPHLDTGDFVIVINAEKVTVTGKKRQQ 72
Query: 575 KLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHP 754
K+YRR SGRPGGM VE+FD+LQ+RIPERIIEHAV+GMLPK LGR LF LKVY G EHP
Sbjct: 73 KVYRRDSGRPGGMKVESFDKLQKRIPERIIEHAVKGMLPKNSLGRKLFTKLKVYAGAEHP 132
Query: 755 HEAQKPLDLPI 787
H+AQ+P L I
Sbjct: 133 HQAQQPEVLAI 143
>sp|Q0ID31|RL13_SYNS3 50S ribosomal protein L13 OS=Synechococcus sp. (strain
CC9311) GN=rplM PE=3 SV=1
Length = 150
Score = 181 bits (458), Expect = 8e-045
Identities = 85/131 (64%), Positives = 105/131 (80%)
Frame = +2
Query: 395 DKPWYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQ 574
D+ WY+VDA ++ LGRLA+ +A+ +RGKN AS+TP +D G FVIVVNA+K+ VSGKK Q
Sbjct: 13 DRQWYLVDAENQTLGRLATEVASVLRGKNKASFTPHLDTGDFVIVVNADKIRVSGKKPQQ 72
Query: 575 KLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHP 754
KLYRRHSGRPGGM VETF+ LQ+R+PERI+E A++GMLP LGR LF LKVYKG EHP
Sbjct: 73 KLYRRHSGRPGGMKVETFEHLQERLPERIVEKAIKGMLPHNALGRQLFRKLKVYKGTEHP 132
Query: 755 HEAQKPLDLPI 787
H AQ+P L +
Sbjct: 133 HAAQQPKTLQL 143
>sp|B0C427|RL13_ACAM1 50S ribosomal protein L13 OS=Acaryochloris marina (strain
MBIC 11017) GN=rplM PE=3 SV=1
Length = 151
Score = 180 bits (456), Expect = 1e-044
Identities = 92/144 (63%), Positives = 107/144 (74%), Gaps = 3/144 (2%)
Frame = +2
Query: 359 TWYPKASDHVNTDKPWYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNA 538
T+ P S DK WYVVDA ++ LGRLA+ IA +RGKN +YTP ++ G FVIV+NA
Sbjct: 4 TYLPTVS---TADKKWYVVDAENQRLGRLATQIAMILRGKNKPTYTPFMNTGDFVIVINA 60
Query: 539 EKVAVSGKKRNQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALF 718
EKV V+G K QKLYRRHSGRPGGM ETF+ LQ+RIPERIIE AV+GMLPK LGR LF
Sbjct: 61 EKVTVTGNKGEQKLYRRHSGRPGGMKTETFNHLQERIPERIIEKAVKGMLPKNALGRQLF 120
Query: 719 NHLKVYKGPEHPHEAQKPLDLPIR 790
LKVY GP+HPH AQKP L I+
Sbjct: 121 RSLKVYAGPDHPHAAQKPEVLSIQ 144
>sp|Q31L33|RL13_SYNE7 50S ribosomal protein L13 OS=Synechococcus elongatus
(strain PCC 7942) GN=rplM PE=3 SV=1
Length = 151
Score = 180 bits (456), Expect = 1e-044
Identities = 87/132 (65%), Positives = 106/132 (80%)
Frame = +2
Query: 395 DKPWYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQ 574
++ WYVVDA D+ LGRLA+ IA +RGK+ +YTP +D G FVIV+NA+KV V+G+K +Q
Sbjct: 13 ERNWYVVDAADQRLGRLATEIARVLRGKHKPTYTPHMDTGDFVIVINADKVTVTGRKASQ 72
Query: 575 KLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHP 754
KLYRRHSGRPGGM VETF LQQR+PERIIE AV+GMLPK LGR LF LKVY+G EHP
Sbjct: 73 KLYRRHSGRPGGMKVETFAHLQQRLPERIIEQAVKGMLPKNALGRQLFTKLKVYRGAEHP 132
Query: 755 HEAQKPLDLPIR 790
H+AQ+P L I+
Sbjct: 133 HQAQQPEVLSIQ 144
>sp|Q5N0T9|RL13_SYNP6 50S ribosomal protein L13 OS=Synechococcus sp. (strain
ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rplM PE=3 SV=1
Length = 151
Score = 180 bits (456), Expect = 1e-044
Identities = 87/132 (65%), Positives = 106/132 (80%)
Frame = +2
Query: 395 DKPWYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQ 574
++ WYVVDA D+ LGRLA+ IA +RGK+ +YTP +D G FVIV+NA+KV V+G+K +Q
Sbjct: 13 ERNWYVVDAADQRLGRLATEIARVLRGKHKPTYTPHMDTGDFVIVINADKVTVTGRKASQ 72
Query: 575 KLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHP 754
KLYRRHSGRPGGM VETF LQQR+PERIIE AV+GMLPK LGR LF LKVY+G EHP
Sbjct: 73 KLYRRHSGRPGGMKVETFAHLQQRLPERIIEQAVKGMLPKNALGRQLFTKLKVYRGAEHP 132
Query: 755 HEAQKPLDLPIR 790
H+AQ+P L I+
Sbjct: 133 HQAQQPEVLSIQ 144
>sp|Q3AW67|RL13_SYNS9 50S ribosomal protein L13 OS=Synechococcus sp. (strain
CC9902) GN=rplM PE=3 SV=2
Length = 150
Score = 180 bits (456), Expect = 1e-044
Identities = 84/131 (64%), Positives = 104/131 (79%)
Frame = +2
Query: 395 DKPWYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQ 574
D+ WYVVDA ++ LGRLA+ +A+ +RGKN ++TP +D G FV+VVNAEK+ VSGKK Q
Sbjct: 13 DRQWYVVDAENQTLGRLATEVASILRGKNNPNFTPHLDTGDFVVVVNAEKIQVSGKKPQQ 72
Query: 575 KLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHP 754
KLYRRHSGRPGGM VETF+ LQ+RIPERI+E A++GMLP LGR ++ LKVYKG EHP
Sbjct: 73 KLYRRHSGRPGGMKVETFESLQERIPERIVEKAIKGMLPHNALGRQMYRKLKVYKGTEHP 132
Query: 755 HEAQKPLDLPI 787
H AQKP L +
Sbjct: 133 HSAQKPQPLQL 143
>sp|B7KI14|RL13_CYAP7 50S ribosomal protein L13 OS=Cyanothece sp. (strain PCC
7424) GN=rplM PE=3 SV=1
Length = 151
Score = 179 bits (453), Expect = 3e-044
Identities = 87/131 (66%), Positives = 101/131 (77%)
Frame = +2
Query: 395 DKPWYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQ 574
DK WYV+DA + LGRLAS IA +RGKN +YTP +D G FVIV+NAEKV V+GKK Q
Sbjct: 13 DKQWYVIDAAGQRLGRLASEIAMILRGKNKPTYTPHLDTGDFVIVINAEKVIVTGKKSQQ 72
Query: 575 KLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHP 754
K+Y RHSGRPGGM VETF++LQ R+PERI+E AV+GMLPK LGR LF LKVY G HP
Sbjct: 73 KVYHRHSGRPGGMKVETFEKLQARLPERIVEKAVKGMLPKNSLGRQLFTKLKVYSGSNHP 132
Query: 755 HEAQKPLDLPI 787
H+AQKP L I
Sbjct: 133 HQAQKPETLTI 143
>sp|Q1XDJ6|RK13_PORYE 50S ribosomal protein L13, chloroplastic OS=Porphyra
yezoensis GN=rpl13 PE=3 SV=1
Length = 142
Score = 178 bits (450), Expect = 7e-044
Identities = 84/132 (63%), Positives = 104/132 (78%)
Frame = +2
Query: 377 SDHVNTDKPWYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVS 556
S +NT+ WYV+DA ++ LGR+++ I+N +RGKN SYTP +D G +VIV+N+ V+VS
Sbjct: 6 SPSLNTNSHWYVIDAKNQTLGRISTHISNILRGKNKPSYTPYLDTGDYVIVINSAHVSVS 65
Query: 557 GKKRNQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVY 736
G K NQKLYRRHSG+PGG+ VETFDQLQ R+P RIIE +V+GMLPKG LGR LF LKVY
Sbjct: 66 GNKTNQKLYRRHSGQPGGLKVETFDQLQTRLPNRIIEKSVKGMLPKGPLGRKLFTKLKVY 125
Query: 737 KGPEHPHEAQKP 772
GP HPH AQKP
Sbjct: 126 SGPIHPHVAQKP 137
>sp|A2BYR0|RL13_PROM5 50S ribosomal protein L13 OS=Prochlorococcus marinus
(strain MIT 9515) GN=rplM PE=3 SV=1
Length = 143
Score = 178 bits (449), Expect = 9e-044
Identities = 86/129 (66%), Positives = 102/129 (79%)
Frame = +2
Query: 395 DKPWYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQ 574
++ W++VDA DK LGRLA+ IA+ +RGKN ++TP +D G FVIVVNAEKV V+GKK +Q
Sbjct: 13 ERNWFLVDAKDKTLGRLATEIASVLRGKNKPTFTPHLDTGDFVIVVNAEKVEVTGKKTSQ 72
Query: 575 KLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHP 754
KLYRRHSGRPGGM VE F+ LQ+RIPERIIE AV+GMLP LGR F LKVYKG EHP
Sbjct: 73 KLYRRHSGRPGGMKVEKFESLQERIPERIIEQAVKGMLPHNSLGRQQFKKLKVYKGSEHP 132
Query: 755 HEAQKPLDL 781
H AQ P+ L
Sbjct: 133 HAAQNPVSL 141
>sp|P73294|RL13_SYNY3 50S ribosomal protein L13 OS=Synechocystis sp. (strain PCC
6803) GN=rplM PE=3 SV=1
Length = 151
Score = 178 bits (449), Expect = 9e-044
Identities = 84/133 (63%), Positives = 102/133 (76%)
Frame = +2
Query: 389 NTDKPWYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKR 568
N D WYV+DA + LGRLA+ +A +RGKN ++TP +D G FVI++NAEK+ V+G+KR
Sbjct: 11 NLDHKWYVIDAEGQRLGRLATEVATILRGKNKPTFTPHMDTGDFVIIINAEKIEVTGRKR 70
Query: 569 NQKLYRRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPE 748
QKLYRRHSGRPGGM ETF++LQ R+PERI+E AVRGMLPK LGR LF LKVY GP
Sbjct: 71 EQKLYRRHSGRPGGMKEETFEKLQVRLPERIVESAVRGMLPKNSLGRKLFTKLKVYAGPS 130
Query: 749 HPHEAQKPLDLPI 787
HPH AQ+P L I
Sbjct: 131 HPHAAQQPETLVI 143
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,413,996,008
Number of Sequences: 518415
Number of Extensions: 65413996008
Number of Successful Extensions: 465124098
Number of sequences better than 0.0: 0
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