BLASTX 7.6.2
Query= UN16127 /QuerySize=1009
(1008 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G78630.1 | Symbols: emb1473 | emb1473 (embryo ... 440 9e-124
TAIR9_protein||AT3G01790.1 | Symbols: | ribosomal protein L13 f... 81 8e-016
TAIR9_protein||AT3G01790.2 | Symbols: | ribosomal protein L13 f... 81 8e-016
>TAIR9_protein||AT1G78630.1 | Symbols: emb1473 | emb1473 (embryo defective
1473); structural constituent of ribosome | chr1:29575997-29577406
FORWARD
Length = 242
Score = 440 bits (1130), Expect = 9e-124
Identities = 218/243 (89%), Positives = 229/243 (94%), Gaps = 6/243 (2%)
Frame = +2
Query: 74 MAILCSSSTVIQLPSSSVKTSGCDRRSPFLGFSLNAISKPQVRIATNANTKRGVQVKCEA 253
MA+LCSSSTVI L SSSVK+SG +R+SPFLGFSL AISKP VR+ AN+KRG+QVKCEA
Sbjct: 1 MAVLCSSSTVI-LSSSSVKSSGSERKSPFLGFSLTAISKPSVRVGIYANSKRGLQVKCEA 59
Query: 254 EQATTITTTTSSLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPWYVVDATDKI 433
E TTT+SLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPW+VVDATDKI
Sbjct: 60 E-----PTTTTSLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPWFVVDATDKI 114
Query: 434 LGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGM 613
LGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGM
Sbjct: 115 LGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGM 174
Query: 614 TVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPLDLPIRD 793
TVETFDQLQQRIPERI+EHAVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPLDLPIRD
Sbjct: 175 TVETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPLDLPIRD 234
Query: 794 KRI 802
KRI
Sbjct: 235 KRI 237
Score = 433 bits (1112), Expect = 1e-121
Identities = 213/242 (88%), Positives = 225/242 (92%), Gaps = 5/242 (2%)
Frame = +2
Query: 92 SSTVIQLPSSSVKTSGCDRRSPFLGFSLNAISKPQVRIATNANTKRGVQVKCEAEQATTI 271
SS+ + L SSSVK+SG +R+SPFLGFSL AISKP VR+ AN+KRG+QVKCEAE
Sbjct: 6 SSSTVILSSSSVKSSGSERKSPFLGFSLTAISKPSVRVGIYANSKRGLQVKCEAE----- 60
Query: 272 TTTTSSLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPWYVVDATDKILGRLAS 451
TTT+SLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPW+VVDATDKILGRLAS
Sbjct: 61 PTTTTSLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPWFVVDATDKILGRLAS 120
Query: 452 TIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVETFD 631
TIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVETFD
Sbjct: 121 TIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTVETFD 180
Query: 632 QLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPLDLPIRDKRIQL* 811
QLQQRIPERI+EHAVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPLDLPIRDKRIQL
Sbjct: 181 QLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPLDLPIRDKRIQLQ 240
Query: 812 K* 817
K*
Sbjct: 241 K* 242
>TAIR9_protein||AT3G01790.1 | Symbols: | ribosomal protein L13 family protein |
chr3:283880-285583 REVERSE
Length = 206
Score = 81 bits (199), Expect = 8e-016
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
Frame = +2
Query: 404 WYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLY 583
W V DA ++LGRLAS I+ ++ K+ +Y P+ D G IV+NA+++ +G+K K Y
Sbjct: 32 WRVFDARGQVLGRLASQISTVLQAKDKPTYCPNRDDGDICIVLNAKEIGFTGRKLTDKFY 91
Query: 584 RRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEA 763
R H+G G + + + P +I AV MLP L L++++G EHP
Sbjct: 92 RWHTGYIGHLKERSLKDQMAKDPTEVIRKAVWRMLPSNNLRDDRDRKLRIFEGGEHPF-G 150
Query: 764 QKPLD 778
KPL+
Sbjct: 151 DKPLE 155
>TAIR9_protein||AT3G01790.2 | Symbols: | ribosomal protein L13 family protein |
chr3:283880-285583 REVERSE
Length = 206
Score = 81 bits (199), Expect = 8e-016
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
Frame = +2
Query: 404 WYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLY 583
W V DA ++LGRLAS I+ ++ K+ +Y P+ D G IV+NA+++ +G+K K Y
Sbjct: 32 WRVFDARGQVLGRLASQISTVLQAKDKPTYCPNRDDGDICIVLNAKEIGFTGRKLTDKFY 91
Query: 584 RRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEA 763
R H+G G + + + P +I AV MLP L L++++G EHP
Sbjct: 92 RWHTGYIGHLKERSLKDQMAKDPTEVIRKAVWRMLPSNNLRDDRDRKLRIFEGGEHPF-G 150
Query: 764 QKPLD 778
KPL+
Sbjct: 151 DKPLE 155
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,463,037,472
Number of Sequences: 33410
Number of Extensions: 8463037472
Number of Successful Extensions: 300900582
Number of sequences better than 0.0: 0
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