BLASTX 7.6.2
Query= UN16140 /QuerySize=822
(821 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9SKT0|THF1_ARATH Protein THYLAKOID FORMATION 1, chloroplasti... 275 3e-073
sp|Q7XAB8|THF1_SOLTU Protein THYLAKOID FORMATION1, chloroplastic... 216 2e-055
sp|Q84PB7|THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic... 207 8e-053
sp|B0C3M8|THF1_ACAM1 Protein thf1 OS=Acaryochloris marina (strai... 104 1e-021
sp|Q116P5|THF1_TRIEI Protein thf1 OS=Trichodesmium erythraeum (s... 102 4e-021
sp|B7KI38|THF1_CYAP7 Protein thf1 OS=Cyanothece sp. (strain PCC ... 99 3e-020
sp|B8HQ62|THF1_CYAP4 Protein thf1 OS=Cyanothece sp. (strain PCC ... 96 3e-019
sp|B1XHY6|THF1_SYNP2 Protein thf1 OS=Synechococcus sp. (strain A... 94 1e-018
sp|Q31MY4|THF1_SYNE7 Protein thf1 OS=Synechococcus elongatus (st... 92 5e-018
sp|Q5N664|THF1_SYNP6 Protein thf1 OS=Synechococcus sp. (strain A... 92 5e-018
sp|Q8DJT8|THF1_THEEB Protein thf1 OS=Thermosynechococcus elongat... 91 8e-018
sp|B7K277|THF1_CYAP8 Protein thf1 OS=Cyanothece sp. (strain PCC ... 89 4e-017
sp|P0C1D1|THF1_SYNJB Protein thf1 OS=Synechococcus sp. GN=thf1 P... 85 5e-016
sp|Q2JSQ3|THF1_SYNJA Protein thf1 OS=Synechococcus sp. (strain J... 85 6e-016
sp|P73956|THF1_SYNY3 Protein thf1 OS=Synechocystis sp. (strain P... 82 5e-015
sp|A9BAB2|THF1_PROM4 Protein thf1 OS=Prochlorococcus marinus (st... 52 4e-006
>sp|Q9SKT0|THF1_ARATH Protein THYLAKOID FORMATION 1, chloroplastic
OS=Arabidopsis thaliana GN=THF1 PE=1 SV=1
Length = 300
Score = 275 bits (702), Expect = 3e-073
Identities = 155/221 (70%), Positives = 172/221 (77%), Gaps = 8/221 (3%)
Frame = +2
Query: 125 AAAIASLSFPALGQSAKISNSTTPSLPLASVSAISRRISRHSLTSSSSSRASKLIIHCMS 304
A AI+SLSFPALGQS KISN + S PLAS I + SR SL S S+ SK +IHCMS
Sbjct: 3 ATAISSLSFPALGQSDKISNFAS-SRPLASAIRICTKFSRLSLNSRST---SKSLIHCMS 58
Query: 305 SVT-DVPPVSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVT 481
+VT DVPPVSETKS FLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVT
Sbjct: 59 NVTADVPPVSETKSKFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVT 118
Query: 482 VYDQLMDGYPSDQDRDSIFQAYVQALNEDPNQYRADAQKMEEWARSQTSASLVDFSSKRE 661
VYDQLM+GYPSDQDRD+IF+AY++ALNEDP QYR DAQKMEEWARSQTSASLVDFSSK
Sbjct: 119 VYDQLMEGYPSDQDRDAIFKAYIEALNEDPKQYRIDAQKMEEWARSQTSASLVDFSSKEG 178
Query: 662 KLKRFLRTF--QKSWQ*EVSVTAVLRCWLVRLLS-CSATDP 775
++ L+ + + S + L RLL SATDP
Sbjct: 179 DIEAVLKDIAGRAGSKEGFSYSRFFAVGLFRLLELASATDP 219
>sp|Q7XAB8|THF1_SOLTU Protein THYLAKOID FORMATION1, chloroplastic OS=Solanum
tuberosum GN=THF1 PE=2 SV=1
Length = 293
Score = 216 bits (548), Expect = 2e-055
Identities = 107/186 (57%), Positives = 143/186 (76%), Gaps = 2/186 (1%)
Frame = +2
Query: 128 AAIASLSFPALGQSAKISNSTTPSLPLASVSAISRRISRHSLTSSSSSRASKLIIHC-MS 304
AA+ S+SF A+ QSA+ +S + S + + S S S+ SS+ S+ ++HC S
Sbjct: 2 AAVTSVSFSAITQSAERKSSVSSSRSIDTFRFRS-NFSFDSVNVRSSNSTSRFVVHCTSS 60
Query: 305 SVTDVPPVSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTV 484
S D+P V++TK FL AYKRPIP++YNTVLQELIVQQHL RYKK+Y+YDPVFALGFVTV
Sbjct: 61 SAADLPTVADTKLKFLTAYKRPIPTVYNTVLQELIVQQHLTRYKKSYQYDPVFALGFVTV 120
Query: 485 YDQLMDGYPSDQDRDSIFQAYVQALNEDPNQYRADAQKMEEWARSQTSASLVDFSSKREK 664
YDQLM+GYPS++DR++IF+AY++AL EDP QYRADAQK+EEWAR+Q + +LVDFSSK +
Sbjct: 121 YDQLMEGYPSEEDRNAIFKAYIEALKEDPEQYRADAQKLEEWARTQNANTLVDFSSKEGE 180
Query: 665 LKRFLR 682
++ +
Sbjct: 181 IENIFK 186
>sp|Q84PB7|THF1_ORYSJ Protein THYLAKOID FORMATION1, chloroplastic OS=Oryza
sativa subsp. japonica GN=THF1 PE=2 SV=1
Length = 287
Score = 207 bits (526), Expect = 8e-053
Identities = 115/215 (53%), Positives = 148/215 (68%), Gaps = 12/215 (5%)
Frame = +2
Query: 149 FPALGQSAKISNSTTPSLPLASVSAISRRISRHSLTSSSSSRASKLIIHCMSSVTDVPP- 325
F AL ++A ST + A A+ + S R S+ ++ C+++ DVPP
Sbjct: 9 FAALRRAADCRPSTAAAAAGAGAGAV--------VLSVRPRRGSRSVVRCVATAGDVPPT 60
Query: 326 VSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMDG 505
V+ETK NFLK+YKRPI SIY+TVLQEL+VQQHLMRYK TY+YD VFALGFVTVYDQLM+G
Sbjct: 61 VAETKMNFLKSYKRPILSIYSTVLQELLVQQHLMRYKTTYQYDAVFALGFVTVYDQLMEG 120
Query: 506 YPSDQDRDSIFQAYVQALNEDPNQYRADAQKMEEWARSQTSASLVDFSSKREKLKRFLRT 685
YPS++DRD+IF+AY+ ALNEDP QYRADAQKMEEWARSQ SLV+FSSK +++ L+
Sbjct: 121 YPSNEDRDAIFKAYITALNEDPEQYRADAQKMEEWARSQNGNSLVEFSSKDGEIEAILKD 180
Query: 686 FQKSWQ*E--VSVTAVLRCWLVRLLS-CSATDPRL 781
+ Q + S + L RLL +AT+P +
Sbjct: 181 ISERAQGKGSFSYSRFFAVGLFRLLELANATEPTI 215
>sp|B0C3M8|THF1_ACAM1 Protein thf1 OS=Acaryochloris marina (strain MBIC 11017)
GN=thf1 PE=3 SV=1
Length = 247
Score = 104 bits (258), Expect = 1e-021
Identities = 45/107 (42%), Positives = 73/107 (68%)
Frame = +2
Query: 326 VSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMDG 505
VS+TK F + RP+ S+Y V++EL+V+ HL+R + +RYDP+FALG T +D+ MDG
Sbjct: 7 VSDTKRAFYSIHTRPVNSVYRRVVEELMVEMHLLRVNEDFRYDPIFALGVTTSFDRFMDG 66
Query: 506 YPSDQDRDSIFQAYVQALNEDPNQYRADAQKMEEWARSQTSASLVDF 646
Y + D+D+IF A +A DP Q + D Q++ E A+S+++ ++D+
Sbjct: 67 YQPENDKDAIFSAICKAQEADPVQMKKDGQRLTELAQSKSAQEMLDW 113
>sp|Q116P5|THF1_TRIEI Protein thf1 OS=Trichodesmium erythraeum (strain IMS101)
GN=thf1 PE=3 SV=1
Length = 239
Score = 102 bits (253), Expect = 4e-021
Identities = 46/107 (42%), Positives = 71/107 (66%)
Frame = +2
Query: 326 VSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMDG 505
VS+TK F + RPI SIYN V++EL+V+ HL+ Y Y+P +ALG VT +D+ M G
Sbjct: 7 VSDTKKTFYHFHTRPINSIYNRVIEELLVEMHLISVNVDYSYNPFYALGVVTAFDRFMQG 66
Query: 506 YPSDQDRDSIFQAYVQALNEDPNQYRADAQKMEEWARSQTSASLVDF 646
Y +D+ SIF A +Q EDPN+YR+DA+ +E+ A +++ ++ +
Sbjct: 67 YSPQEDKTSIFNALIQGQEEDPNKYRSDAKGLEDLAGKISASDILSW 113
>sp|B7KI38|THF1_CYAP7 Protein thf1 OS=Cyanothece sp. (strain PCC 7424) GN=thf1
PE=3 SV=1
Length = 226
Score = 99 bits (245), Expect = 3e-020
Identities = 46/108 (42%), Positives = 71/108 (65%)
Frame = +2
Query: 317 VPPVSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQL 496
V VS++K +F + RPI S+Y V++EL+V+ HL+ ++YDPV+ALG VT + +
Sbjct: 4 VRTVSDSKRDFYTKHTRPINSVYRRVVEELMVEMHLLSVNSDFQYDPVYALGVVTSFQRF 63
Query: 497 MDGYPSDQDRDSIFQAYVQALNEDPNQYRADAQKMEEWARSQTSASLV 640
M GY D D++SIF A Q++ DP QYR DA++M E A+ ++ L+
Sbjct: 64 MQGYRPDADKESIFNALCQSVGGDPQQYRQDAERMIESAKQLSAQQLL 111
>sp|B8HQ62|THF1_CYAP4 Protein thf1 OS=Cyanothece sp. (strain PCC 7425 / ATCC
29141) GN=thf1 PE=3 SV=1
Length = 236
Score = 96 bits (237), Expect = 3e-019
Identities = 51/114 (44%), Positives = 70/114 (61%)
Frame = +2
Query: 326 VSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMDG 505
VS+TK F + RPI SIY V++EL+V+ HL+R +T+ YDPVFALG VT +++ M G
Sbjct: 7 VSDTKRAFYHNHARPINSIYRRVVEELLVEIHLLRVNQTFVYDPVFALGVVTTFERFMQG 66
Query: 506 YPSDQDRDSIFQAYVQALNEDPNQYRADAQKMEEWARSQTSASLVDFSSKREKL 667
Y D+ SIF A A DP Q + DAQ++ R Q+ SL+D+ S L
Sbjct: 67 YHPPADQTSIFNAICLAQELDPQQVQQDAQELLGRVRGQSLESLLDWISTAASL 120
>sp|B1XHY6|THF1_SYNP2 Protein thf1 OS=Synechococcus sp. (strain ATCC 27264 / PCC
7002 / PR-6) GN=thf1 PE=3 SV=1
Length = 254
Score = 94 bits (232), Expect = 1e-018
Identities = 44/112 (39%), Positives = 71/112 (63%)
Frame = +2
Query: 308 VTDVPPVSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVY 487
++ V VS+TK +F + RPI SI+ V++EL+V+ HL+ +RYDP +ALG VT +
Sbjct: 1 MSQVRTVSDTKRDFYTHHTRPINSIFRRVVEELLVEMHLLSVNADFRYDPFYALGVVTSF 60
Query: 488 DQLMDGYPSDQDRDSIFQAYVQALNEDPNQYRADAQKMEEWARSQTSASLVD 643
++ M GY + D+ SIFQ+ QA+ D N+Y+ DA + E A+ + L++
Sbjct: 61 ERFMQGYRPEADKVSIFQSMCQAIGGDANRYKEDAMALVELAKRCSGTQLIE 112
>sp|Q31MY4|THF1_SYNE7 Protein thf1 OS=Synechococcus elongatus (strain PCC 7942)
GN=thf1 PE=3 SV=2
Length = 254
Score = 92 bits (226), Expect = 5e-018
Identities = 48/132 (36%), Positives = 74/132 (56%)
Frame = +2
Query: 308 VTDVPPVSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVY 487
+T VP VS++K F AY RPI +Y V++EL+V+ HL+ ++ YDP+FALG VT +
Sbjct: 1 MTSVPTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAF 60
Query: 488 DQLMDGYPSDQDRDSIFQAYVQALNEDPNQYRADAQKMEEWARSQTSASLVDFSSKREKL 667
D M Y + +F A QA+ ++P QYR DA + E R S ++ + ++ E L
Sbjct: 61 DSFMSSYRPIEAVGPLFTALTQAVRQNPEQYRHDANAIAEQVRGVGSDTIRQWLTEAEAL 120
Query: 668 KRFLRTFQKSWQ 703
+ S+Q
Sbjct: 121 GNAPELVRSSFQ 132
>sp|Q5N664|THF1_SYNP6 Protein thf1 OS=Synechococcus sp. (strain ATCC 27144 / PCC
6301 / SAUG 1402/1) GN=thf1 PE=3 SV=2
Length = 254
Score = 92 bits (226), Expect = 5e-018
Identities = 48/132 (36%), Positives = 74/132 (56%)
Frame = +2
Query: 308 VTDVPPVSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVY 487
+T VP VS++K F AY RPI +Y V++EL+V+ HL+ ++ YDP+FALG VT +
Sbjct: 1 MTSVPTVSDSKRAFYAAYPRPINPLYRRVVEELLVEIHLLSVNTSFVYDPLFALGVVTAF 60
Query: 488 DQLMDGYPSDQDRDSIFQAYVQALNEDPNQYRADAQKMEEWARSQTSASLVDFSSKREKL 667
D M Y + +F A QA+ ++P QYR DA + E R S ++ + ++ E L
Sbjct: 61 DSFMSSYRPIEAVGPLFTALTQAVRQNPEQYRHDANAIAEQVRGVGSDTIRQWLTEAEAL 120
Query: 668 KRFLRTFQKSWQ 703
+ S+Q
Sbjct: 121 GNAPELVRSSFQ 132
>sp|Q8DJT8|THF1_THEEB Protein thf1 OS=Thermosynechococcus elongatus (strain
BP-1) GN=thf1 PE=3 SV=1
Length = 222
Score = 91 bits (224), Expect = 8e-018
Identities = 46/109 (42%), Positives = 65/109 (59%)
Frame = +2
Query: 326 VSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMDG 505
VS+TK F A+ RPI SIY ++EL+V+ HL+R +RY P+FALG VT +DQ M+G
Sbjct: 7 VSDTKRAFYAAHTRPIHSIYRRFIEELLVEIHLLRVNVDFRYSPLFALGVVTAFDQFMEG 66
Query: 506 YPSDQDRDSIFQAYVQALNEDPNQYRADAQKMEEWARSQTSASLVDFSS 652
Y + DRD IF A A +P Q + DA +++ S L + +S
Sbjct: 67 YQPEGDRDRIFHALCVAEEMNPQQLKEDAASWQQYQGRPLSQILDELNS 115
>sp|B7K277|THF1_CYAP8 Protein thf1 OS=Cyanothece sp. (strain PCC 8801) GN=thf1
PE=3 SV=1
Length = 235
Score = 89 bits (218), Expect = 4e-017
Identities = 41/105 (39%), Positives = 65/105 (61%)
Frame = +2
Query: 326 VSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMDG 505
VS+TK +F + RPI SIY ++EL+V+ HL+ +RYDP++ALG V + Q M G
Sbjct: 7 VSDTKRDFYNHHTRPINSIYRRFIEELLVEMHLLCVNIDFRYDPIYALGVVASFQQFMQG 66
Query: 506 YPSDQDRDSIFQAYVQALNEDPNQYRADAQKMEEWARSQTSASLV 640
Y ++D++SIF A QA+ D +YR +AQ + + + + L+
Sbjct: 67 YRPEEDKNSIFSALCQAVGGDGEKYRHEAQTLLNQVKGMSVSDLI 111
>sp|P0C1D1|THF1_SYNJB Protein thf1 OS=Synechococcus sp. GN=thf1 PE=3 SV=1
Length = 239
Score = 85 bits (209), Expect = 5e-016
Identities = 42/97 (43%), Positives = 61/97 (62%)
Frame = +2
Query: 317 VPPVSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQL 496
V +S TK+ F AY RPI ++Y V++EL+V+ HL T+ YDP FALG VT+YD L
Sbjct: 4 VRTLSATKAAFFSAYPRPINAVYRRVVEELLVELHLTTVNSTFVYDPFFALGLVTLYDGL 63
Query: 497 MDGYPSDQDRDSIFQAYVQALNEDPNQYRADAQKMEE 607
M+ Y + R++IF A +AL+ P R +A+ + E
Sbjct: 64 MEAYHPPEQREAIFNALCKALHLKPEVLRKNARDLLE 100
>sp|Q2JSQ3|THF1_SYNJA Protein thf1 OS=Synechococcus sp. (strain JA-3-3Ab)
GN=thf1 PE=3 SV=1
Length = 239
Score = 85 bits (208), Expect = 6e-016
Identities = 43/101 (42%), Positives = 61/101 (60%)
Frame = +2
Query: 317 VPPVSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQL 496
V +S TK+ F AY RPI + Y V++EL+V+ HL + YDP FALG VT+YD L
Sbjct: 4 VRTLSATKAAFFSAYPRPINAAYRRVVEELLVELHLTTVNSAFVYDPFFALGLVTLYDSL 63
Query: 497 MDGYPSDQDRDSIFQAYVQALNEDPNQYRADAQKMEEWARS 619
M+ Y + R++IF A +AL+ P R +A+ + E RS
Sbjct: 64 MEAYHPPEQREAIFNALCKALHLKPEVLRKNARDLLELMRS 104
>sp|P73956|THF1_SYNY3 Protein thf1 OS=Synechocystis sp. (strain PCC 6803)
GN=thf1 PE=3 SV=1
Length = 240
Score = 82 bits (200), Expect = 5e-015
Identities = 37/98 (37%), Positives = 58/98 (59%)
Frame = +2
Query: 308 VTDVPPVSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVY 487
+T + VS+ K F Y RPI SIY ++EL+V+ HL+ + YDP+FALG VT +
Sbjct: 1 MTKIRTVSDAKRKFFTHYSRPISSIYRRFVEELLVEMHLLSVNIDFTYDPIFALGIVTSF 60
Query: 488 DQLMDGYPSDQDRDSIFQAYVQALNEDPNQYRADAQKM 601
+ M GY + +IF A ++++P+Q R DA+ +
Sbjct: 61 NSFMQGYQPAEQLPAIFNALCHGVDQNPDQVRQDAKNV 98
>sp|A9BAB2|THF1_PROM4 Protein thf1 OS=Prochlorococcus marinus (strain MIT 9211)
GN=thf1 PE=3 SV=1
Length = 221
Score = 52 bits (123), Expect = 4e-006
Identities = 28/116 (24%), Positives = 61/116 (52%), Gaps = 3/116 (2%)
Frame = +2
Query: 326 VSETKSNFLKAYKRPIPSIYNTVLQELIVQQHLMRYKKTYRYDPVFALGFVTVYDQLMDG 505
VSE+K+ F K + +P++Y ++ ELIV+ +L++ ++ + D VFA+G +++ G
Sbjct: 7 VSESKAIFHKEFPFVVPAVYRRLVDELIVELNLLKNQERFVADGVFAIGLTSIFLDFTKG 66
Query: 506 YPSDQDRDSIFQAYVQALN---EDPNQYRADAQKMEEWARSQTSASLVDFSSKREK 664
Y + + + +A + + Q +A+K+ + SL+ +++ EK
Sbjct: 67 YKPENQKGILLEAICKCTGFSASNLEQIALEAKKLANGLNTNEIKSLITDNNRDEK 122
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,413,996,008
Number of Sequences: 518415
Number of Extensions: 65413996008
Number of Successful Extensions: 465124098
Number of sequences better than 0.0: 0
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