BLASTX 7.6.2
Query= UN16179 /QuerySize=689
(688 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G09590.1 | Symbols: | 60S ribosomal protein L... 174 5e-044
TAIR9_protein||AT1G09690.1 | Symbols: | 60S ribosomal protein L... 174 5e-044
TAIR9_protein||AT1G57660.1 | Symbols: | 60S ribosomal protein L... 174 5e-044
TAIR9_protein||AT1G57860.1 | Symbols: | 60S ribosomal protein L... 174 5e-044
>TAIR9_protein||AT1G09590.1 | Symbols: | 60S ribosomal protein L21 (RPL21A) |
chr1:3106549-3107606 FORWARD
Length = 165
Score = 174 bits (440), Expect = 5e-044
Identities = 82/87 (94%), Positives = 85/87 (97%)
Frame = +1
Query: 55 MPAGHGVRARTRDLFARGFRKKGTIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 234
MPAGHGVRARTRDLFAR FRKKG IPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 235 TGRVWNVTKRAVGVEVNKQIGNRIIKE 315
TGR+WNVTKRAVGVEVNKQIGNRII++
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRK 87
Score = 162 bits (408), Expect = 3e-040
Identities = 82/96 (85%), Positives = 87/96 (90%), Gaps = 5/96 (5%)
Frame = +2
Query: 266 LSVSKSI-NRLATGSLRKRLHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKAKGETISTK 442
+ V+K I NR+ +RKR+HVRVEHVQQSRCAEEFKLRKKKNDELKAAAKA GETISTK
Sbjct: 74 VEVNKQIGNRI----IRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETISTK 129
Query: 443 RQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY* 550
RQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY*
Sbjct: 130 RQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY* 165
>TAIR9_protein||AT1G09690.1 | Symbols: | 60S ribosomal protein L21 (RPL21C) |
chr1:3136407-3137430 REVERSE
Length = 165
Score = 174 bits (440), Expect = 5e-044
Identities = 82/87 (94%), Positives = 85/87 (97%)
Frame = +1
Query: 55 MPAGHGVRARTRDLFARGFRKKGTIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 234
MPAGHGVRARTRDLFAR FRKKG IPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 235 TGRVWNVTKRAVGVEVNKQIGNRIIKE 315
TGR+WNVTKRAVGVEVNKQIGNRII++
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRK 87
Score = 162 bits (408), Expect = 3e-040
Identities = 82/96 (85%), Positives = 87/96 (90%), Gaps = 5/96 (5%)
Frame = +2
Query: 266 LSVSKSI-NRLATGSLRKRLHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKAKGETISTK 442
+ V+K I NR+ +RKR+HVRVEHVQQSRCAEEFKLRKKKNDELKAAAKA GETISTK
Sbjct: 74 VEVNKQIGNRI----IRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETISTK 129
Query: 443 RQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY* 550
RQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY*
Sbjct: 130 RQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY* 165
>TAIR9_protein||AT1G57660.1 | Symbols: | 60S ribosomal protein L21 (RPL21E) |
chr1:21355567-21356364 FORWARD
Length = 165
Score = 174 bits (440), Expect = 5e-044
Identities = 82/87 (94%), Positives = 85/87 (97%)
Frame = +1
Query: 55 MPAGHGVRARTRDLFARGFRKKGTIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 234
MPAGHGVRARTRDLFAR FRKKG IPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 235 TGRVWNVTKRAVGVEVNKQIGNRIIKE 315
TGR+WNVTKRAVGVEVNKQIGNRII++
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRK 87
Score = 156 bits (393), Expect = 2e-038
Identities = 79/96 (82%), Positives = 86/96 (89%), Gaps = 5/96 (5%)
Frame = +2
Query: 266 LSVSKSI-NRLATGSLRKRLHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKAKGETISTK 442
+ V+K I NR+ +RKR+HVRVEHVQQSRCAEEFKLRKK+ND LKA AKA+GETISTK
Sbjct: 74 VEVNKQIGNRI----IRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAKARGETISTK 129
Query: 443 RQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY* 550
RQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY*
Sbjct: 130 RQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY* 165
>TAIR9_protein||AT1G57860.1 | Symbols: | 60S ribosomal protein L21 |
chr1:21430034-21430827 REVERSE
Length = 165
Score = 174 bits (440), Expect = 5e-044
Identities = 82/87 (94%), Positives = 85/87 (97%)
Frame = +1
Query: 55 MPAGHGVRARTRDLFARGFRKKGTIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 234
MPAGHGVRARTRDLFAR FRKKG IPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR
Sbjct: 1 MPAGHGVRARTRDLFARPFRKKGYIPLSTYLRTFKVGDYVDVKVNGAIHKGMPHKFYHGR 60
Query: 235 TGRVWNVTKRAVGVEVNKQIGNRIIKE 315
TGR+WNVTKRAVGVEVNKQIGNRII++
Sbjct: 61 TGRIWNVTKRAVGVEVNKQIGNRIIRK 87
Score = 156 bits (393), Expect = 2e-038
Identities = 79/96 (82%), Positives = 86/96 (89%), Gaps = 5/96 (5%)
Frame = +2
Query: 266 LSVSKSI-NRLATGSLRKRLHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKAKGETISTK 442
+ V+K I NR+ +RKR+HVRVEHVQQSRCAEEFKLRKK+ND LKA AKA+GETISTK
Sbjct: 74 VEVNKQIGNRI----IRKRIHVRVEHVQQSRCAEEFKLRKKQNDVLKADAKARGETISTK 129
Query: 443 RQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY* 550
RQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY*
Sbjct: 130 RQPKGPKPGFMVEGMTLETVTPIPYDVVNDLKGGY* 165
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,463,037,472
Number of Sequences: 33410
Number of Extensions: 8463037472
Number of Successful Extensions: 300900582
Number of sequences better than 0.0: 0
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