BLASTX 7.6.2
Query= UN16199 /QuerySize=685
(684 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G23740.1 | Symbols: RPS11-BETA | RPS11-BETA (R... 315 2e-086
TAIR9_protein||AT3G48930.1 | Symbols: EMB1080 | EMB1080 (embryo ... 312 2e-085
TAIR9_protein||AT4G30800.1 | Symbols: | 40S ribosomal protein S... 307 5e-084
>TAIR9_protein||AT5G23740.1 | Symbols: RPS11-BETA | RPS11-BETA (RIBOSOMAL
PROTEIN S11-BETA); structural constituent of ribosome |
chr5:8008251-8009330 REVERSE
Length = 160
Score = 315 bits (806), Expect = 2e-086
Identities = 151/160 (94%), Positives = 155/160 (96%)
Frame = -2
Query: 617 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPRDAIEGHYIDKKCP 438
MAEQTEKAFLKQPKVFLSSK SGKGKRPGKGGNRFWKNIGLGFKTPR+AI+G YID KCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKISGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYIDSKCP 60
Query: 437 FTGTVSVRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 258
FTGTVS+RGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 257 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFAKKAFTGM* 138
GDHVIIGQCRPLSKTVRFNVLKVIPAGASAF KKAFTG+*
Sbjct: 121 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFGKKAFTGV* 160
>TAIR9_protein||AT3G48930.1 | Symbols: EMB1080 | EMB1080 (embryo defective
1080); structural constituent of ribosome | chr3:18141017-18142189
REVERSE
Length = 161
Score = 312 bits (798), Expect = 2e-085
Identities = 149/161 (92%), Positives = 157/161 (97%), Gaps = 1/161 (0%)
Frame = -2
Query: 617 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPRDAIEGHYIDKKCP 438
MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPR+AI+G Y+DKKCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIDGAYVDKKCP 60
Query: 437 FTGTVSVRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 258
FTGTVS+RGRILAGTCHSAKMQRTIIVRR+YLHFVKKYQRYEKRHSNIPAHVSPCFRVKE
Sbjct: 61 FTGTVSIRGRILAGTCHSAKMQRTIIVRRDYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 120
Query: 257 GDHVIIGQCRPLSKTVRFNVLKVIPAG-ASAFAKKAFTGM* 138
GDH+IIGQCRPLSKTVRFNVLKVIPAG +S+F KKAFTGM*
Sbjct: 121 GDHIIIGQCRPLSKTVRFNVLKVIPAGSSSSFGKKAFTGM* 161
>TAIR9_protein||AT4G30800.1 | Symbols: | 40S ribosomal protein S11 (RPS11B) |
chr4:15001216-15002392 FORWARD
Length = 160
Score = 307 bits (785), Expect = 5e-084
Identities = 146/160 (91%), Positives = 154/160 (96%)
Frame = -2
Query: 617 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPRDAIEGHYIDKKCP 438
MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPR+AIEG YID+KCP
Sbjct: 1 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRFWKNIGLGFKTPREAIEGTYIDQKCP 60
Query: 437 FTGTVSVRGRILAGTCHSAKMQRTIIVRRNYLHFVKKYQRYEKRHSNIPAHVSPCFRVKE 258
FTGTVS+RGRIL+GTCHSAKMQRTIIVRR+YLHFVKKY+RYEKRHSNIPAHVSPCFRVKE
Sbjct: 61 FTGTVSIRGRILSGTCHSAKMQRTIIVRRDYLHFVKKYRRYEKRHSNIPAHVSPCFRVKE 120
Query: 257 GDHVIIGQCRPLSKTVRFNVLKVIPAGASAFAKKAFTGM* 138
GD V IGQCRPLSKTVRFNVLKVIPAG+S+ KKAFTGM*
Sbjct: 121 GDRVTIGQCRPLSKTVRFNVLKVIPAGSSSIGKKAFTGM* 160
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,463,037,472
Number of Sequences: 33410
Number of Extensions: 8463037472
Number of Successful Extensions: 300900582
Number of sequences better than 0.0: 0
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