Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN16253


BLASTX 7.6.2

Query= UN16253 /QuerySize=1160
        (1159 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G49510.1 | Symbols: emb1273 | emb1273 (embryo ...    377   1e-104

>TAIR9_protein||AT1G49510.1 | Symbols: emb1273 | emb1273 (embryo defective 1273)
        | chr1:18327026-18328147 FORWARD

          Length = 241

 Score =  377 bits (966), Expect = 1e-104
 Identities = 191/241 (79%), Positives = 206/241 (85%), Gaps = 7/241 (2%)
 Frame = -1

Query: 1072 MAMSHLFL-SSPRPSLAPRLHSPTQL---YS--NKSKSLKGANEAKASKRLFLCRSIHME 911
            MAMSHLFL SSP+ SLA RLHS TQ    YS  NK  S + ANEAK SKR  LCR+IHME
Sbjct:    1 MAMSHLFLSSSPQSSLALRLHSTTQFTLSYSKNNKDCSFQSANEAKVSKRSLLCRAIHME 60

Query:  910 SDHSGDS-KRLTFDTLLRKAKDVWNDSPQPVKDFPWNRAFENFVQLVLDLAISVVKLLFV 734
            S HSG+  K+L FD LLR+ K VW++SPQPVK+FPWNRAF NF+QLVLDLAISVVK LFV
Sbjct:   61 SGHSGEQPKKLNFDNLLRRTKHVWDNSPQPVKEFPWNRAFGNFIQLVLDLAISVVKFLFV 120

Query:  733 PVLAVSSVSEMSYCAHERKLALVPFPLVIGVVVGGFLQGTALNISPRLKEAEVPWHLIAM 554
            P+LAVSS+SEMSYCAHERKLALVPFPLVIG+VV G LQ TAL ISPRLKEAEVPWHLIAM
Sbjct:  121 PILAVSSISEMSYCAHERKLALVPFPLVIGMVVAGVLQETALKISPRLKEAEVPWHLIAM 180

Query:  553 MMLFTLIKLPGPYYPYWGRLFVPHFANGVLVRALWSMFFWYKKTRNTSGTPLQNHSSETK 374
            MM FTLIKLPGPYYPYWGRL VPHFANGVL+RALWSMFFWYKKTRNTSG PLQNHS ET+
Sbjct:  181 MMFFTLIKLPGPYYPYWGRLLVPHFANGVLLRALWSMFFWYKKTRNTSGNPLQNHSLETE 240

Query:  373 * 371
            *
Sbjct:  241 * 241

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,555,687,411
Number of Sequences: 33410
Number of Extensions: 8555687411
Number of Successful Extensions: 306270863
Number of sequences better than 0.0: 0