BLASTX 7.6.2
Query= UN16263 /QuerySize=853
(852 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G46820.1 | Symbols: PTAC8, TMP14, PSAP, PSI-P ... 240 1e-063
TAIR9_protein||AT2G46820.2 | Symbols: PTAC8, TMP14, PSAP, PSI-P ... 240 1e-063
TAIR9_protein||AT1G52220.1 | Symbols: | FUNCTIONS IN: molecular... 97 9e-021
TAIR9_protein||AT1G52220.2 | Symbols: | FUNCTIONS IN: molecular... 93 2e-019
TAIR9_protein||AT4G01150.1 | Symbols: | unknown protein | chr4:... 89 2e-018
TAIR9_protein||AT4G38100.1 | Symbols: | unknown protein | chr4:... 65 4e-011
TAIR9_protein||AT1G52220.3 | Symbols: | FUNCTIONS IN: molecular... 57 1e-008
>TAIR9_protein||AT2G46820.1 | Symbols: PTAC8, TMP14, PSAP, PSI-P | PSI-P
(PHOTOSYSTEM I P SUBUNIT); DNA binding | chr2:19243729-19244870
FORWARD
Length = 175
Score = 240 bits (610), Expect = 1e-063
Identities = 127/174 (72%), Positives = 144/174 (82%), Gaps = 8/174 (4%)
Frame = +2
Query: 125 MASLSITSSSTIINSRASPLP-RQASTSSPSCISLPMLPPQ----PLQSTAYCRKIARNV 289
MASLS++SSSTII+SRA P AS SSPSCISLP LP Q ++TAYCRKI RNV
Sbjct: 1 MASLSVSSSSTIIDSRAPPSRLASASASSPSCISLPTLPIQSHTRAAKATAYCRKIVRNV 60
Query: 290 LTRA-TEV--EASVTADADTTELPEIVKTAQEAWEKVEDKYAIGSLAFAALLALWGSTGL 460
+TRA TEV + T +A+TTELPEIVKTAQEAWEKV+DKYAIGSLAFA ++ALWGS G+
Sbjct: 61 VTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGM 120
Query: 461 ISAIDRLPLFPGVFELVGIGYTGWFAYKNLIFKPDREVLFQKIKDTYRDILGSS 622
ISAIDRLPL PGV ELVGIGYTGWF YKNL+FKPDRE LF+K+K TY+DILGSS
Sbjct: 121 ISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGSS 174
>TAIR9_protein||AT2G46820.2 | Symbols: PTAC8, TMP14, PSAP, PSI-P | PSI-P
(PHOTOSYSTEM I P SUBUNIT); DNA binding | chr2:19243729-19244870
FORWARD
Length = 175
Score = 240 bits (610), Expect = 1e-063
Identities = 127/174 (72%), Positives = 144/174 (82%), Gaps = 8/174 (4%)
Frame = +2
Query: 125 MASLSITSSSTIINSRASPLP-RQASTSSPSCISLPMLPPQ----PLQSTAYCRKIARNV 289
MASLS++SSSTII+SRA P AS SSPSCISLP LP Q ++TAYCRKI RNV
Sbjct: 1 MASLSVSSSSTIIDSRAPPSRLASASASSPSCISLPTLPIQSHTRAAKATAYCRKIVRNV 60
Query: 290 LTRA-TEV--EASVTADADTTELPEIVKTAQEAWEKVEDKYAIGSLAFAALLALWGSTGL 460
+TRA TEV + T +A+TTELPEIVKTAQEAWEKV+DKYAIGSLAFA ++ALWGS G+
Sbjct: 61 VTRATTEVGEAPATTTEAETTELPEIVKTAQEAWEKVDDKYAIGSLAFAGVVALWGSAGM 120
Query: 461 ISAIDRLPLFPGVFELVGIGYTGWFAYKNLIFKPDREVLFQKIKDTYRDILGSS 622
ISAIDRLPL PGV ELVGIGYTGWF YKNL+FKPDRE LF+K+K TY+DILGSS
Sbjct: 121 ISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFKPDREALFEKVKSTYKDILGSS 174
>TAIR9_protein||AT1G52220.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding
(TAIR:AT2G46820.2); Has 203 Blast hits to 203 proteins in 35 species:
Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 136;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr1:19453770-19454605 REVERSE
Length = 157
Score = 97 bits (241), Expect = 9e-021
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 1/114 (0%)
Frame = +2
Query: 275 IARNVLTRATEVEASVTADADTTELPEIVKTAQEAWEKVEDKYAIGSLAFAALLALWGST 454
+ RN + + V+AS + +T+L ++V T Q W+K ED+ + L FA ++ALW S
Sbjct: 43 LTRNPSSISLMVKASGESSDSSTDL-DVVSTIQNVWDKSEDRLGLIGLGFAGIVALWASL 101
Query: 455 GLISAIDRLPLFPGVFELVGIGYTGWFAYKNLIFKPDREVLFQKIKDTYRDILG 616
LI+AID+LP+ FELVGI ++ WF Y+ L+FKPDR+ L + +K + DILG
Sbjct: 102 NLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPDRQELSKIVKKSVADILG 155
>TAIR9_protein||AT1G52220.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding
(TAIR:AT2G46820.2); Has 203 Blast hits to 203 proteins in 35 species:
Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 136;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr1:19453770-19454605 REVERSE
Length = 156
Score = 93 bits (229), Expect = 2e-019
Identities = 49/114 (42%), Positives = 74/114 (64%), Gaps = 2/114 (1%)
Frame = +2
Query: 275 IARNVLTRATEVEASVTADADTTELPEIVKTAQEAWEKVEDKYAIGSLAFAALLALWGST 454
+ RN + + V+AS + +T+L ++V T Q W+K ED+ + L FA ++ALW S
Sbjct: 43 LTRNPSSISLMVKASGESSDSSTDL-DVVSTIQN-WDKSEDRLGLIGLGFAGIVALWASL 100
Query: 455 GLISAIDRLPLFPGVFELVGIGYTGWFAYKNLIFKPDREVLFQKIKDTYRDILG 616
LI+AID+LP+ FELVGI ++ WF Y+ L+FKPDR+ L + +K + DILG
Sbjct: 101 NLITAIDKLPVISSGFELVGILFSTWFTYRYLLFKPDRQELSKIVKKSVADILG 154
>TAIR9_protein||AT4G01150.1 | Symbols: | unknown protein | chr4:493692-494668
FORWARD
Length = 165
Score = 89 bits (220), Expect = 2e-018
Identities = 55/170 (32%), Positives = 95/170 (55%), Gaps = 15/170 (8%)
Frame = +2
Query: 131 SLSITSSSTIINSRASPLPRQASTSSPSCISLPMLPPQPLQSTAY---CRKIARNVLTRA 301
++S+ +SS S A +PR + S+ C ++P LPP+ +++ + ++ N L +
Sbjct: 2 AISVAASS----SMAVMVPRVPAVST-RCSAVPYLPPRSFGRSSFTVPLKLVSGNGLQKV 56
Query: 302 ----TEVEASVTADADTTELPEIVKTAQEAWEKVEDKYAIGSLAFAALLALWGSTGLISA 469
T + T+ DT EL + +E W+ +E+K + A++A+W S+ ++ A
Sbjct: 57 ELLKTRASSEETSSIDTNEL---ITDLKEKWDGLENKSTVLIYGGGAIVAVWLSSIVVGA 113
Query: 470 IDRLPLFPGVFELVGIGYTGWFAYKNLIFKPDREVLFQKIKDTYRDILGS 619
I+ +PL P V ELVG+GYTGWF Y+ L+FK R+ L + I+ + I GS
Sbjct: 114 INSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAEDIESLKKKIAGS 163
>TAIR9_protein||AT4G38100.1 | Symbols: | unknown protein |
chr4:17887033-17888177 REVERSE
Length = 194
Score = 65 bits (158), Expect = 4e-011
Identities = 34/102 (33%), Positives = 60/102 (58%), Gaps = 7/102 (6%)
Frame = +2
Query: 341 TELPEIVKTAQEAWEKVED-------KYAIGSLAFAALLALWGSTGLISAIDRLPLFPGV 499
+E P+ +A E + D Y+I A++AL+ ++ ++S+++ +PLFP +
Sbjct: 91 SEAPQAEDEETQALEFLNDIKLDSDKTYSILLYGSGAIVALYLTSAIVSSLEAIPLFPKL 150
Query: 500 FELVGIGYTGWFAYKNLIFKPDREVLFQKIKDTYRDILGSSS 625
E+VG+GYT WF + L+FK +RE L K+ + + +LGS S
Sbjct: 151 MEVVGLGYTLWFTTRYLLFKRNREELKTKVSEIKKQVLGSDS 192
>TAIR9_protein||AT1G52220.3 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding
(TAIR:AT2G46820.2); Has 172 Blast hits to 172 proteins in 28 species:
Archae - 0; Bacteria - 44; Metazoa - 0; Fungi - 0; Plants - 127;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr1:19453770-19454605 REVERSE
Length = 128
Score = 57 bits (136), Expect = 1e-008
Identities = 26/50 (52%), Positives = 36/50 (72%)
Frame = +2
Query: 467 AIDRLPLFPGVFELVGIGYTGWFAYKNLIFKPDREVLFQKIKDTYRDILG 616
AID+LP+ FELVGI ++ WF Y+ L+FKPDR+ L + +K + DILG
Sbjct: 77 AIDKLPVISSGFELVGILFSTWFTYRYLLFKPDRQELSKIVKKSVADILG 126
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,555,687,411
Number of Sequences: 33410
Number of Extensions: 8555687411
Number of Successful Extensions: 306270863
Number of sequences better than 0.0: 0
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