BLASTX 7.6.2
Query= UN16281 /QuerySize=849
(848 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q869E1|DNLI1_DICDI DNA ligase 1 OS=Dictyostelium discoideum G... 54 2e-006
sp|A5PKK7|GORAB_BOVIN RAB6-interacting golgin OS=Bos taurus GN=G... 54 2e-006
sp|B1H222|GORAB_RAT RAB6-interacting golgin OS=Rattus norvegicus... 54 2e-006
sp|Q8BRM2|GORAB_MOUSE RAB6-interacting golgin OS=Mus musculus GN... 52 3e-006
sp|Q5T7V8|GORAB_HUMAN RAB6-interacting golgin OS=Homo sapiens GN... 51 8e-006
sp|P35748|MYH11_RABIT Myosin-11 OS=Oryctolagus cuniculus GN=MYH1... 51 8e-006
>sp|Q869E1|DNLI1_DICDI DNA ligase 1 OS=Dictyostelium discoideum GN=lig1 PE=3
SV=1
Length = 1192
Score = 54 bits (127), Expect = 2e-006
Identities = 46/181 (25%), Positives = 86/181 (47%), Gaps = 9/181 (4%)
Frame = +2
Query: 11 DKRLKKQKKKEKKKFCGKMQPTEATRPATAEQSRRLKDELSESMSFSSQMKKEDEELSVK 190
+K LK ++KKEK+K +++ E+ E+ ++ K+E + + + +++EL K
Sbjct: 212 EKVLKDKEKKEKEKKEKELKEKESKEKEKKEKEKKEKEEKDKKEKELKEKELKEKELKDK 271
Query: 191 ALSAFKAKEDEI---EKKKMEIRERVLAQLGRVEDETKRLALIREELEGFADPMRKEVTL 361
K KE E+ EKK+ E++E+ + E E K +EL+ + +KE L
Sbjct: 272 KEKELKEKEKELKDKEKKEKELKEKEKKEKEEKEKEKKEKK--EKELKEKEEKEKKEKEL 329
Query: 362 IRKKI---DSLDKEIKPLGNTVQKKE-VEYKDALEAFNEKNKEKVELITKLQELEGESEK 529
K++ + +KE+K T KKE ++ D + N + K V T + +K
Sbjct: 330 KEKELKEKELKEKELKEKELTSPKKETIDISDLFKRANAEAKSSVPTSTSKNSKTNKKQK 389
Query: 530 M 532
+
Sbjct: 390 V 390
>sp|A5PKK7|GORAB_BOVIN RAB6-interacting golgin OS=Bos taurus GN=GORAB PE=2 SV=2
Length = 370
Score = 54 bits (127), Expect = 2e-006
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Frame = +2
Query: 155 QMKKEDEELSVKALSAFKAKEDEIEKKKMEIRERVLAQL-----GRVEDETKRLALIREE 319
Q++K+ EL K+ +E + ++K + ++ +LA+ R + ET +L I++E
Sbjct: 129 QLEKKKVELQEKSRWEVLQQEQRLMEEKNKRKKALLAKAIAERSKRTQAETMKLKRIQKE 188
Query: 320 LEGFADPMRKEVTLIRKKIDSLDKEIKPLGNTVQKKEVEYKDALEAFNEKNKEKVELITK 499
L+ D + ++ ++R +ID + + E EY A K + K +L
Sbjct: 189 LQALDDMVSADIGILRNRIDQASLDYSYARKRFDRAEAEYVTAKLELQRKTELKEQLTEH 248
Query: 500 LQELEGESEKMRLKKLEELSKNIDL 574
L + ++E + KKLEEL + +D+
Sbjct: 249 LCTIIQQNELRKAKKLEELMQQLDV 273
>sp|B1H222|GORAB_RAT RAB6-interacting golgin OS=Rattus norvegicus GN=Gorab PE=2
SV=2
Length = 368
Score = 54 bits (127), Expect = 2e-006
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Frame = +2
Query: 155 QMKKEDEELSVKALSAFKAKEDEIEKKKMEIRERVLAQL-----GRVEDETKRLALIREE 319
+++K+ EL K+ +E + ++K + ++ +LAQ R + ET +L I++E
Sbjct: 132 KVEKKKMELQEKSRWEVLQQEQRLMEEKNKRKKALLAQAIAERSRRTQAETMKLKRIQKE 191
Query: 320 LEGFADPMRKEVTLIRKKIDSLDKEIKPLGNTVQKKEVEYKDALEAFNEKNKEKVELITK 499
L+ D + ++ ++R +ID E + E EY A K + K +L
Sbjct: 192 LQALDDMVSADIGILRNRIDQASLEYSYARKRFDRAEAEYVTAKLDLQRKTETKEQLTEH 251
Query: 500 LQELEGESEKMRLKKLEELSKNIDL 574
L + ++E + +KLEEL + +D+
Sbjct: 252 LCTIIQQNELRKAQKLEELMRQLDV 276
>sp|Q8BRM2|GORAB_MOUSE RAB6-interacting golgin OS=Mus musculus GN=Gorab PE=1
SV=1
Length = 368
Score = 52 bits (124), Expect = 3e-006
Identities = 36/145 (24%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Frame = +2
Query: 155 QMKKEDEELSVKALSAFKAKEDEIEKKKMEIRERVLAQL-----GRVEDETKRLALIREE 319
+++K+ EL K+ +E + ++K + ++ +LAQ + + ET +L I++E
Sbjct: 132 KVEKKKMELQEKSRWEVLQQEQRLMEEKNKRKKALLAQAIAERSKKTQAETIKLKRIQKE 191
Query: 320 LEGFADPMRKEVTLIRKKIDSLDKEIKPLGNTVQKKEVEYKDALEAFNEKNKEKVELITK 499
L+ D + ++ ++R +ID E + E EY A K + K +L
Sbjct: 192 LQALDDMVSADIGILRNRIDQASLEYSYARKRFDRAEAEYITAKLDLQRKTETKEQLTEH 251
Query: 500 LQELEGESEKMRLKKLEELSKNIDL 574
L + ++E + KKLEEL + +D+
Sbjct: 252 LCTIIQQNELRKAKKLEELMQQLDV 276
>sp|Q5T7V8|GORAB_HUMAN RAB6-interacting golgin OS=Homo sapiens GN=GORAB PE=1
SV=1
Length = 394
Score = 51 bits (121), Expect = 8e-006
Identities = 30/120 (25%), Positives = 60/120 (50%)
Frame = +2
Query: 215 EDEIEKKKMEIRERVLAQLGRVEDETKRLALIREELEGFADPMRKEVTLIRKKIDSLDKE 394
E++ ++KK + + + + R + ET +L I++EL+ D + ++ ++R +ID +
Sbjct: 182 EEKNKRKKALLAKAIAERSKRTQAETMKLKRIQKELQALDDMVSADIGILRNRIDQASLD 241
Query: 395 IKPLGNTVQKKEVEYKDALEAFNEKNKEKVELITKLQELEGESEKMRLKKLEELSKNIDL 574
+ E EY A K + K +L L + ++E + KKLEEL + +D+
Sbjct: 242 YSYARKRFDRAEAEYIAAKLDIQRKTEIKEQLTEHLCTIIQQNELRKAKKLEELMQQLDV 301
>sp|P35748|MYH11_RABIT Myosin-11 OS=Oryctolagus cuniculus GN=MYH11 PE=2 SV=2
Length = 1972
Score = 51 bits (121), Expect = 8e-006
Identities = 39/166 (23%), Positives = 84/166 (50%), Gaps = 5/166 (3%)
Frame = +2
Query: 26 KQKKKEKKKFCGKMQPTEATRPATAEQSRRLKDELSESMSFSSQMKKEDE--ELSVKALS 199
+++ +E++ K+Q + T A + ++L+D++ ++++ KE + E + L+
Sbjct: 956 EEQLEEEEAARQKLQLEKVTAEA---KIKKLEDDILVMDDQNNKLSKERKLLEERISDLT 1012
Query: 200 AFKAKEDEIEKKKMEIRERVLAQLGRVEDETKRLALIREELEGFADPMRKEVTLIRKKID 379
A+E+E K +++ + + + +E K+ R+ELE M E + + ++I
Sbjct: 1013 TNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKLKRKMDGEASDLHEQIA 1072
Query: 380 SLDKEIKPLGNTVQKKEVEYKDALEAFNEKNKEKVELITKLQELEG 517
L +I L + KKE E + AL ++ +K + K++ELEG
Sbjct: 1073 DLQAQIAELKMQLAKKEEELQAALARLEDETSQKNNALKKIRELEG 1118
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,946,960,590
Number of Sequences: 518415
Number of Extensions: 65946960590
Number of Successful Extensions: 470808347
Number of sequences better than 0.0: 0
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