BLASTX 7.6.2
Query= UN16283 /QuerySize=897
(896 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G09620.1 | Symbols: | FUNCTIONS IN: molecular... 391 5e-109
>TAIR9_protein||AT4G09620.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Mitochodrial transcription
termination factor-related (InterPro:IPR003690); Has 120 Blast hits to
97 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 103; Viruses - 0; Other Eukaryotes - 17 (source: NCBI
BLink). | chr4:6077122-6078899 REVERSE
Length = 213
Score = 391 bits (1002), Expect = 5e-109
Identities = 182/212 (85%), Positives = 197/212 (92%)
Frame = -1
Query: 800 EMLGSSLASPLATVGSVKCFRHSAGDFVTYSNVLPLRLNLSYHGVVGGVRTSRLPRNKWI 621
EM+G+SLASPLAT+GS KCFRHSA D VTY+NVLPLRLN SYHGV GGVRTS R+KWI
Sbjct: 2 EMVGNSLASPLATLGSAKCFRHSAVDLVTYTNVLPLRLNSSYHGVNGGVRTSSYSRSKWI 61
Query: 620 VLCSTTQVETSGDEPKTWEECKEALSCFDFSVEEQDKILGKAFGHIHSPYWTEERVKENP 441
V CSTTQVETS ++P WEECKEALSCFDFSVEE+DKILGKAFGHIHSPYWTEERVKENP
Sbjct: 62 VFCSTTQVETSNEDPNIWEECKEALSCFDFSVEEKDKILGKAFGHIHSPYWTEERVKENP 121
Query: 440 KVETLNHVVEFLRSLGLSDEDLHKVLKKFPEVLGCSLEEEMKPNIGILESQWGITGKSLR 261
KVETLN ++EFLRSLGLSDEDLHKV+KKFPEVLGCSLEEEMKPNIGILE+QWGITGK LR
Sbjct: 122 KVETLNQILEFLRSLGLSDEDLHKVMKKFPEVLGCSLEEEMKPNIGILENQWGITGKQLR 181
Query: 260 SLVLRNPKVLGYNVDCKGDCIAQCTRCWVRF* 165
+L+LRNPKVLGYNVDCKGDC+AQCTRCWVRF*
Sbjct: 182 NLLLRNPKVLGYNVDCKGDCVAQCTRCWVRF* 213
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,555,687,411
Number of Sequences: 33410
Number of Extensions: 8555687411
Number of Successful Extensions: 306270863
Number of sequences better than 0.0: 0
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