BLASTX 7.6.2
Query= UN16325 /QuerySize=1449
(1448 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|18412241|ref|NP_565198.1| DNA repair protein recA-like 1 [Ara... 486 5e-135
gi|166841|gb|AAA32855.1| replicase [Arabidopsis thaliana] 486 5e-135
gi|227204159|dbj|BAH56931.1| AT1G79050 [Arabidopsis thaliana] 437 3e-120
gi|224115208|ref|XP_002332188.1| predicted protein [Populus tric... 422 1e-115
gi|255578168|ref|XP_002529953.1| DNA repair protein reca, putati... 419 7e-115
gi|115454275|ref|NP_001050738.1| Os03g0639700 [Oryza sativa Japo... 413 7e-113
gi|218193384|gb|EEC75811.1| hypothetical protein OsI_12760 [Oryz... 413 7e-113
gi|226533038|ref|NP_001148809.1| protein recA [Zea mays] 412 9e-113
gi|242038743|ref|XP_002466766.1| hypothetical protein SORBIDRAFT... 411 1e-112
gi|225462225|ref|XP_002271727.1| PREDICTED: similar to replicase... 409 1e-111
gi|296082805|emb|CBI21810.3| unnamed protein product [Vitis vini... 409 1e-111
gi|223945977|gb|ACN27072.1| unknown [Zea mays] 364 3e-098
gi|134122760|dbj|BAF49678.1| RecA [Physcomitrella patens] 351 3e-094
gi|50881446|gb|AAT85291.1| DNA repair protein recA, putative [Or... 311 3e-082
gi|145327737|ref|NP_001077844.1| DNA repair protein recA-like 1 ... 304 3e-080
gi|303271543|ref|XP_003055133.1| recA DNA recombinase [Micromona... 282 1e-073
gi|255080474|ref|XP_002503817.1| recA DNA recombinase [Micromona... 280 5e-073
gi|1346871|sp|P49108.1|PSBR_BRACM RecName: Full=Photosystem II 1... 275 1e-071
gi|145351664|ref|XP_001420188.1| predicted protein [Ostreococcus... 274 4e-071
gi|121483553|gb|ABM54168.1| PSII 10Kd peptide [Brassica juncea] 273 6e-071
>gi|18412241|ref|NP_565198.1| DNA repair protein recA-like 1 [Arabidopsis
thaliana]
Length = 439
Score = 486 bits (1250), Expect = 5e-135
Identities = 248/260 (95%), Positives = 252/260 (96%)
Frame = -2
Query: 1447 YSKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQ 1268
YSKALGVDVENLIVCQPDNGEMALE ADRMCRS AVDLICVDSVSALTPRAEIEGEIGMQ
Sbjct: 179 YSKALGVDVENLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQ 238
Query: 1267 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 1088
QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR
Sbjct: 239 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 298
Query: 1087 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 908
LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI
Sbjct: 299 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 358
Query: 907 MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPSLQDEIEKRVRLSMLDGEVHRSTPLFS 728
MEVVVKKGSWYSYEDQRLGQGREKALQHLRENP+LQDEIEK+VRL MLDGEVHRSTPL S
Sbjct: 359 MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPALQDEIEKKVRLLMLDGEVHRSTPLMS 418
Query: 727 SSSSSVSHDEEGEEDALGEF 668
SSSSS SH EE EED+L +F
Sbjct: 419 SSSSSASHREEEEEDSLDDF 438
>gi|166841|gb|AAA32855.1| replicase [Arabidopsis thaliana]
Length = 438
Score = 486 bits (1250), Expect = 5e-135
Identities = 248/260 (95%), Positives = 252/260 (96%)
Frame = -2
Query: 1447 YSKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQ 1268
YSKALGVDVENLIVCQPDNGEMALE ADRMCRS AVDLICVDSVSALTPRAEIEGEIGMQ
Sbjct: 178 YSKALGVDVENLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQ 237
Query: 1267 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 1088
QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR
Sbjct: 238 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 297
Query: 1087 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 908
LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI
Sbjct: 298 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 357
Query: 907 MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPSLQDEIEKRVRLSMLDGEVHRSTPLFS 728
MEVVVKKGSWYSYEDQRLGQGREKALQHLRENP+LQDEIEK+VRL MLDGEVHRSTPL S
Sbjct: 358 MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPALQDEIEKKVRLLMLDGEVHRSTPLMS 417
Query: 727 SSSSSVSHDEEGEEDALGEF 668
SSSSS SH EE EED+L +F
Sbjct: 418 SSSSSASHREEEEEDSLDDF 437
>gi|227204159|dbj|BAH56931.1| AT1G79050 [Arabidopsis thaliana]
Length = 448
Score = 437 bits (1123), Expect = 3e-120
Identities = 222/228 (97%), Positives = 225/228 (98%)
Frame = -2
Query: 1447 YSKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQ 1268
YSKALGVDVENLIVCQPDNGEMALE ADRMCRS AVDLICVDSVSALTPRAEIEGEIGMQ
Sbjct: 179 YSKALGVDVENLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQ 238
Query: 1267 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 1088
QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR
Sbjct: 239 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 298
Query: 1087 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 908
LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI
Sbjct: 299 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 358
Query: 907 MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPSLQDEIEKRVRLSML 764
MEVVVKKGSWYSYEDQRLGQGREKALQHLRENP+LQDEIEK+VRL M+
Sbjct: 359 MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPALQDEIEKKVRLLMV 406
>gi|224115208|ref|XP_002332188.1| predicted protein [Populus trichocarpa]
Length = 387
Score = 422 bits (1083), Expect = 1e-115
Identities = 210/237 (88%), Positives = 225/237 (94%)
Frame = -2
Query: 1447 YSKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQ 1268
YSKALGVDVENLIVCQPDNGEMALEIADRMCRS AVDLICVDSVSALTPRAEIEGEIGMQ
Sbjct: 151 YSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQ 210
Query: 1267 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 1088
Q+GLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR
Sbjct: 211 QIGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 270
Query: 1087 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 908
LEIRS GKIKS KGDED+G+R RVRVQKSKVSRPYKQAEFEI+FGEGVS+LGC+LDCAE+
Sbjct: 271 LEIRSTGKIKSVKGDEDVGVRVRVRVQKSKVSRPYKQAEFEIIFGEGVSQLGCILDCAEM 330
Query: 907 MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPSLQDEIEKRVRLSMLDGEVHRSTP 737
M+VVVKKGSWYSY D RLGQGR+KALQ+LR+NP LQ+EIEK+VR +M DG V+ TP
Sbjct: 331 MDVVVKKGSWYSYGDHRLGQGRDKALQYLRDNPHLQEEIEKKVRSTMTDGTVNMGTP 387
>gi|255578168|ref|XP_002529953.1| DNA repair protein reca, putative [Ricinus
communis]
Length = 343
Score = 419 bits (1076), Expect = 7e-115
Identities = 213/255 (83%), Positives = 233/255 (91%), Gaps = 1/255 (0%)
Frame = -2
Query: 1447 YSKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQ 1268
YSKALGVDVENLIVCQPDNGEMALEIADRMCRS AVDLICVDSVSALTPRAEIEGEIGMQ
Sbjct: 89 YSKALGVDVENLIVCQPDNGEMALEIADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQ 148
Query: 1267 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 1088
QMGLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGVYYGNPEVTSGGIALKFFASVR
Sbjct: 149 QMGLQARLMSQALRKMSGNASKAGCTLVFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 208
Query: 1087 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 908
LEIRS GKIKS+KGDED+GLR RVRVQKSKVSRPYKQAEFEI+FGEGVS+LGCVLDCAE+
Sbjct: 209 LEIRSNGKIKSAKGDEDVGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSRLGCVLDCAEM 268
Query: 907 MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPSLQDEIEKRVRLSMLDGEVHRSTPLFS 728
M+VVVKKGSWYSY + RLGQGR++ALQ+LR+NP L +EIEK+VR M DG V+ ++ L+S
Sbjct: 269 MDVVVKKGSWYSYGEHRLGQGRDRALQYLRDNPHLHEEIEKKVRSMMADGTVNTAS-LYS 327
Query: 727 SSSSSVSHDEEGEED 683
+S DE E+
Sbjct: 328 RNSPLPLEDENVLEE 342
>gi|115454275|ref|NP_001050738.1| Os03g0639700 [Oryza sativa Japonica Group]
Length = 418
Score = 413 bits (1059), Expect = 7e-113
Identities = 206/253 (81%), Positives = 227/253 (89%)
Frame = -2
Query: 1447 YSKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQ 1268
YSKALGVD+ENLIVCQPDNGEMALEIADRMCRS A+DLIC+DSVSALTPRAEIEGEIGMQ
Sbjct: 166 YSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQ 225
Query: 1267 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 1088
QMGLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIALKFFASVR
Sbjct: 226 QMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVR 285
Query: 1087 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 908
LEIR GKIKS+KGDED+G++ RVRVQKSKVSRPYKQAEFEI+FGEGVSKLGCVLDCAE+
Sbjct: 286 LEIRPIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEL 345
Query: 907 MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPSLQDEIEKRVRLSMLDGEVHRSTPLFS 728
MEVV KKGSWYSY++ RLGQGREKALQ+LRE+P++ DEIEK VR + +G H S F
Sbjct: 346 MEVVAKKGSWYSYKEMRLGQGREKALQYLRESPTICDEIEKAVRAMIPEGARHMSLLAFG 405
Query: 727 SSSSSVSHDEEGE 689
SS + + E
Sbjct: 406 RSSLTEEEQVDDE 418
>gi|218193384|gb|EEC75811.1| hypothetical protein OsI_12760 [Oryza sativa Indica
Group]
Length = 436
Score = 413 bits (1059), Expect = 7e-113
Identities = 206/253 (81%), Positives = 227/253 (89%)
Frame = -2
Query: 1447 YSKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQ 1268
YSKALGVD+ENLIVCQPDNGEMALEIADRMCRS A+DLIC+DSVSALTPRAEIEGEIGMQ
Sbjct: 184 YSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQ 243
Query: 1267 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 1088
QMGLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIALKFFASVR
Sbjct: 244 QMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVR 303
Query: 1087 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 908
LEIR GKIKS+KGDED+G++ RVRVQKSKVSRPYKQAEFEI+FGEGVSKLGCVLDCAE+
Sbjct: 304 LEIRPIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEL 363
Query: 907 MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPSLQDEIEKRVRLSMLDGEVHRSTPLFS 728
MEVV KKGSWYSY++ RLGQGREKALQ+LRE+P++ DEIEK VR + +G H S F
Sbjct: 364 MEVVAKKGSWYSYKEMRLGQGREKALQYLRESPTICDEIEKAVRAMIPEGARHMSLLAFG 423
Query: 727 SSSSSVSHDEEGE 689
SS + + E
Sbjct: 424 RSSLTEEEQVDDE 436
>gi|226533038|ref|NP_001148809.1| protein recA [Zea mays]
Length = 415
Score = 412 bits (1058), Expect = 9e-113
Identities = 207/254 (81%), Positives = 227/254 (89%)
Frame = -2
Query: 1447 YSKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQ 1268
YSKALGVD+ENLIVCQPDNGEMALEIADRMCRS A+DLIC+DSVSALTPRAEIEGEIGMQ
Sbjct: 162 YSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQ 221
Query: 1267 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 1088
QMGLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIALKFFASVR
Sbjct: 222 QMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVR 281
Query: 1087 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 908
LEIR GKIKS+KGDED+G++ RVRVQKSKVSRPYKQAEFEI+FGEGVSKLGCVLDCAE+
Sbjct: 282 LEIRLIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEL 341
Query: 907 MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPSLQDEIEKRVRLSMLDGEVHRSTPLFS 728
M+VV KKGSWYSY+D RLGQGREKALQ+LRE+P+ DEIEK VR + +G H S F
Sbjct: 342 MDVVAKKGSWYSYKDIRLGQGREKALQYLRESPTTCDEIEKVVRAMIPEGSRHMSLLAFG 401
Query: 727 SSSSSVSHDEEGEE 686
SSS+ E+
Sbjct: 402 QSSSTEDEQAYDEQ 415
>gi|242038743|ref|XP_002466766.1| hypothetical protein SORBIDRAFT_01g013810
[Sorghum bicolor]
Length = 415
Score = 411 bits (1056), Expect = 1e-112
Identities = 205/245 (83%), Positives = 225/245 (91%)
Frame = -2
Query: 1447 YSKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQ 1268
YSKALGVD+ENLIVCQPDNGEMALEIADRMCRS A+DLIC+DSVSALTPRAEIEGEIGMQ
Sbjct: 162 YSKALGVDIENLIVCQPDNGEMALEIADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQ 221
Query: 1267 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 1088
QMGLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIALKFFASVR
Sbjct: 222 QMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVR 281
Query: 1087 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 908
LEIR GKIKS KGDED+G++ RVRVQKSKVSRPYKQAEFEI+FGEGVSKLGCVLDCAE+
Sbjct: 282 LEIRPIGKIKSPKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAEL 341
Query: 907 MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPSLQDEIEKRVRLSMLDGEVHRSTPLFS 728
M+VV KKGSWYSY+D RLGQGREKALQ+LRE+P++ DEIEK VR + +G H S F
Sbjct: 342 MDVVAKKGSWYSYKDIRLGQGREKALQYLRESPTICDEIEKVVRAMIPEGSRHMSLLAFG 401
Query: 727 SSSSS 713
+SS+
Sbjct: 402 QTSST 406
>gi|225462225|ref|XP_002271727.1| PREDICTED: similar to replicase [Vitis
vinifera]
Length = 415
Score = 409 bits (1049), Expect = 1e-111
Identities = 210/254 (82%), Positives = 225/254 (88%)
Frame = -2
Query: 1447 YSKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQ 1268
YSKALGVDVENLIVCQPD+GEMALEIADRMCRS A+DLICVDSVSALTPRAEIEGEIGMQ
Sbjct: 160 YSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQ 219
Query: 1267 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 1088
QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFAS+R
Sbjct: 220 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLR 279
Query: 1087 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 908
LEIR GKIKSSKGDEDIGLR RVRVQKSKVSRPYKQAEFEI+FGEGVSKLGC+LDCAE+
Sbjct: 280 LEIRPIGKIKSSKGDEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEL 339
Query: 907 MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPSLQDEIEKRVRLSMLDGEVHRSTPLFS 728
M+VVVKKGSWYSY D RLGQGR++ALQ+LRENP + EIEK VR M +G P
Sbjct: 340 MDVVVKKGSWYSYGDNRLGQGRDRALQYLRENPLVCHEIEKIVRPMMAEGIGQLGAPHVR 399
Query: 727 SSSSSVSHDEEGEE 686
S +S ++ EE
Sbjct: 400 LSPTSPEDEDILEE 413
>gi|296082805|emb|CBI21810.3| unnamed protein product [Vitis vinifera]
Length = 384
Score = 409 bits (1049), Expect = 1e-111
Identities = 210/254 (82%), Positives = 225/254 (88%)
Frame = -2
Query: 1447 YSKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQ 1268
YSKALGVDVENLIVCQPD+GEMALEIADRMCRS A+DLICVDSVSALTPRAEIEGEIGMQ
Sbjct: 129 YSKALGVDVENLIVCQPDHGEMALEIADRMCRSGAIDLICVDSVSALTPRAEIEGEIGMQ 188
Query: 1267 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 1088
QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFAS+R
Sbjct: 189 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASLR 248
Query: 1087 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 908
LEIR GKIKSSKGDEDIGLR RVRVQKSKVSRPYKQAEFEI+FGEGVSKLGC+LDCAE+
Sbjct: 249 LEIRPIGKIKSSKGDEDIGLRVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCILDCAEL 308
Query: 907 MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPSLQDEIEKRVRLSMLDGEVHRSTPLFS 728
M+VVVKKGSWYSY D RLGQGR++ALQ+LRENP + EIEK VR M +G P
Sbjct: 309 MDVVVKKGSWYSYGDNRLGQGRDRALQYLRENPLVCHEIEKIVRPMMAEGIGQLGAPHVR 368
Query: 727 SSSSSVSHDEEGEE 686
S +S ++ EE
Sbjct: 369 LSPTSPEDEDILEE 382
>gi|223945977|gb|ACN27072.1| unknown [Zea mays]
Length = 433
Score = 364 bits (933), Expect = 3e-098
Identities = 186/243 (76%), Positives = 207/243 (85%), Gaps = 2/243 (0%)
Frame = -2
Query: 1414 LIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQQMGLQARLMSQ 1235
L P N A+ +ADRMCRS A+DLIC+DSVSALTPRAEIEGEIGMQQMGLQARLMSQ
Sbjct: 193 LTASAPQNS--AILVADRMCRSGAIDLICIDSVSALTPRAEIEGEIGMQQMGLQARLMSQ 250
Query: 1234 ALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRLEIRSAGKIKS 1055
ALRKMSGNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIALKFFASVRLEIR GKIKS
Sbjct: 251 ALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALKFFASVRLEIRLIGKIKS 310
Query: 1054 SKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEIMEVVVKKGSWY 875
+KGDED+G++ RVRVQKSKVSRPYKQAEFEI+FGEGVSKLGCVLDCAE+M+VV KKGSWY
Sbjct: 311 AKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCVLDCAELMDVVAKKGSWY 370
Query: 874 SYEDQRLGQGREKALQHLRENPSLQDEIEKRVRLSMLDGEVHRSTPLFSSSSSSVSHDEE 695
SY+D RLGQGREKALQ+LRE+P+ DEIEK VR + +G H S F SSS+
Sbjct: 371 SYKDIRLGQGREKALQYLRESPTTCDEIEKVVRAMIPEGSRHMSLLAFGQSSSTEDEQAY 430
Query: 694 GEE 686
E+
Sbjct: 431 DEQ 433
>gi|134122760|dbj|BAF49678.1| RecA [Physcomitrella patens]
Length = 460
Score = 351 bits (898), Expect = 3e-094
Identities = 174/224 (77%), Positives = 201/224 (89%)
Frame = -2
Query: 1447 YSKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQ 1268
YSKALGVDVE+LIVCQPDNGEMALE ADRMCRS AVD+I +DSVSALTPRAEIEGEIGMQ
Sbjct: 196 YSKALGVDVESLIVCQPDNGEMALETADRMCRSGAVDIIVIDSVSALTPRAEIEGEIGMQ 255
Query: 1267 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 1088
QMGLQARLMSQALRKMS NA++A CT+IFLNQIRYKI V YGNPEVTSGG+ALKFFAS+R
Sbjct: 256 QMGLQARLMSQALRKMSANAARANCTIIFLNQIRYKIAVMYGNPEVTSGGLALKFFASLR 315
Query: 1087 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 908
L+IR+ GKIKS +G++DIG+RARVRVQKSKVSRPYKQAEF+I+FGEG+ KLG +LD AE
Sbjct: 316 LDIRNTGKIKSPRGEDDIGIRARVRVQKSKVSRPYKQAEFDIIFGEGICKLGSLLDSAET 375
Query: 907 MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPSLQDEIEKRVR 776
+ VVV+KG+WYSY + RLGQGR+K +Q LR+ P + +IEK VR
Sbjct: 376 VGVVVRKGAWYSYGETRLGQGRDKVVQFLRDYPEVCADIEKVVR 419
>gi|50881446|gb|AAT85291.1| DNA repair protein recA, putative [Oryza sativa
Japonica Group]
Length = 395
Score = 311 bits (795), Expect = 3e-082
Identities = 156/199 (78%), Positives = 174/199 (87%)
Frame = -2
Query: 1285 GEIGMQQMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALK 1106
GEIGMQQMGLQARLMSQALRKMSGNASKAGCTL+FLNQIRYKIGV+YGNPEVTSGGIALK
Sbjct: 197 GEIGMQQMGLQARLMSQALRKMSGNASKAGCTLMFLNQIRYKIGVFYGNPEVTSGGIALK 256
Query: 1105 FFASVRLEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCV 926
FFASVRLEIR GKIKS+KGDED+G++ RVRVQKSKVSRPYKQAEFEI+FGEGVSKLGCV
Sbjct: 257 FFASVRLEIRPIGKIKSAKGDEDVGVKVRVRVQKSKVSRPYKQAEFEIIFGEGVSKLGCV 316
Query: 925 LDCAEIMEVVVKKGSWYSYEDQRLGQGREKALQHLRENPSLQDEIEKRVRLSMLDGEVHR 746
LDCAE+MEVV KKGSWYSY++ RLGQGREKALQ+LRE+P++ DEIEK VR + +G H
Sbjct: 317 LDCAELMEVVAKKGSWYSYKEMRLGQGREKALQYLRESPTICDEIEKAVRAMIPEGARHM 376
Query: 745 STPLFSSSSSSVSHDEEGE 689
S F SS + + E
Sbjct: 377 SLLAFGRSSLTEEEQVDDE 395
>gi|145327737|ref|NP_001077844.1| DNA repair protein recA-like 1 [Arabidopsis
thaliana]
Length = 343
Score = 304 bits (777), Expect = 3e-080
Identities = 156/159 (98%)
Frame = -2
Query: 1447 YSKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQ 1268
YSKALGVDVENLIVCQPDNGEMALE ADRMCRS AVDLICVDSVSALTPRAEIEGEIGMQ
Sbjct: 179 YSKALGVDVENLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQ 238
Query: 1267 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 1088
QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR
Sbjct: 239 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 298
Query: 1087 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAE 971
LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQ E
Sbjct: 299 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQEE 337
>gi|303271543|ref|XP_003055133.1| recA DNA recombinase [Micromonas pusilla
CCMP1545]
Length = 446
Score = 282 bits (720), Expect = 1e-073
Identities = 135/224 (60%), Positives = 175/224 (78%)
Frame = -2
Query: 1447 YSKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQ 1268
YS LGV V +IVCQP+ GEM LE+ D + RS +DLI VDSV+AL PR+EIEGEIGM
Sbjct: 194 YSARLGVKVNEVIVCQPETGEMGLEVVDALVRSGGIDLIVVDSVAALVPRSEIEGEIGMV 253
Query: 1267 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 1088
Q+G ARLMSQALRK++ NA+KAG T+IFLNQ+R K+GV YGNPE+T+GG ALKF+ASVR
Sbjct: 254 QVGAHARLMSQALRKINVNAAKAGVTIIFLNQLRSKVGVIYGNPEITTGGNALKFYASVR 313
Query: 1087 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 908
L+IR IK G++D+G R +V+V K+KV+ PYK AEF+++FG G+ +GC LD A+
Sbjct: 314 LDIRRKEVIKGKSGEDDLGTRVKVKVAKNKVAPPYKVAEFDMLFGRGIDPMGCTLDAADN 373
Query: 907 MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPSLQDEIEKRVR 776
M VV K+G+WYSY D++LGQGREK ++ LRENP++ +EK VR
Sbjct: 374 MGVVDKRGAWYSYNDEQLGQGREKTMEKLRENPAMLASVEKDVR 417
>gi|255080474|ref|XP_002503817.1| recA DNA recombinase [Micromonas sp. RCC299]
Length = 515
Score = 280 bits (715), Expect = 5e-073
Identities = 132/224 (58%), Positives = 182/224 (81%)
Frame = -2
Query: 1447 YSKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQ 1268
YS+ LG+DV++++VCQP+ GEMALE+ D + RSSAVDLI VDSV+AL PR+EIEGEIGM
Sbjct: 226 YSQRLGLDVDDVVVCQPETGEMALEVVDTLVRSSAVDLIVVDSVAALVPRSEIEGEIGMV 285
Query: 1267 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 1088
Q+G ARLMSQALRK++ NA+KAG T+IFLNQ+R K+GV YGNPE+T+GG ALKF+ASVR
Sbjct: 286 QVGAHARLMSQALRKINVNAAKAGVTIIFLNQLRSKVGVIYGNPEITTGGNALKFYASVR 345
Query: 1087 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 908
L+IR I+ G +D G+R +V+V K+K++ PYK AEF+++FG G+S+ GC+LD A+
Sbjct: 346 LDIRRKEVIRGKAGADDEGVRVKVKVAKNKIAPPYKTAEFDMLFGRGISRDGCMLDAADE 405
Query: 907 MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPSLQDEIEKRVR 776
+ V+ ++G+WYSY ++RLGQGREKA + L NP ++ ++E+ VR
Sbjct: 406 LGVITRRGAWYSYGEERLGQGREKAAEFLDANPEIKKQVEEDVR 449
>gi|1346871|sp|P49108.1|PSBR_BRACM RecName: Full=Photosystem II 10 kDa
polypeptide, chloroplastic; Flags: Precursor
Length = 141
Score = 275 bits (703), Expect = 1e-071
Identities = 138/141 (97%), Positives = 140/141 (99%)
Frame = +1
Query: 52 MAASVMLSSVTLKPAGFTVEKMSARGLPSLARASPSSFKIVASGVKKIKTDKPFGVNGSM 231
MAASVMLSSVTLKPAGFTVEKMSARGLPSL RASPSSF+IVASGVKKIKTDKPFGVNGSM
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 232 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAV 411
DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNE+EWSASGDVYKGGVTGLAIWAV
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAV 120
Query: 412 TLAGILAGGALLVYNTSALAQ 474
TLAGILAGGALLVYNTSALAQ
Sbjct: 121 TLAGILAGGALLVYNTSALAQ 141
>gi|145351664|ref|XP_001420188.1| predicted protein [Ostreococcus lucimarinus
CCE9901]
Length = 369
Score = 274 bits (699), Expect = 4e-071
Identities = 138/262 (52%), Positives = 193/262 (73%), Gaps = 3/262 (1%)
Frame = -2
Query: 1447 YSKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQ 1268
YS+ LG++V+++IVCQP+ GEMALE+ D + RSSAVDLICVDSV+AL PR+EIEGEIGM
Sbjct: 106 YSQRLGLNVDDVIVCQPETGEMALEVVDTLVRSSAVDLICVDSVAALVPRSEIEGEIGMV 165
Query: 1267 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 1088
Q+G ARLMSQALRK++ NA+KAG T+IFLNQ+R K+GV YG+PEVT+GG ALK+++SVR
Sbjct: 166 QVGAHARLMSQALRKINVNAAKAGTTIIFLNQLRSKVGVIYGSPEVTTGGNALKYYSSVR 225
Query: 1087 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 908
L+IR IK G++D G+R +V+V K+KV+ PYK AEF+++FG GVS+ GC+LD E
Sbjct: 226 LDIRRKEVIKGKAGEDDTGVRCKVKVAKNKVAPPYKIAEFDMLFGRGVSRDGCMLDAGEQ 285
Query: 907 MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPSLQDEIEKRVRLSMLDGEVHRSTPLFS 728
+ + +KG++Y + ++LGQGREK L L ENP ++ IE VR + + + +
Sbjct: 286 VGTIERKGAYYYFNGEKLGQGREKTLSFLDENPEMKATIETDVRARLAEKMGLLNGTIAP 345
Query: 727 SSSSSVSHDEE---GEEDALGE 671
++ + DEE +ED + E
Sbjct: 346 KATEAEDDDEEFFDDDEDVIAE 367
>gi|121483553|gb|ABM54168.1| PSII 10Kd peptide [Brassica juncea]
Length = 141
Score = 273 bits (697), Expect = 6e-071
Identities = 137/141 (97%), Positives = 139/141 (98%)
Frame = +1
Query: 52 MAASVMLSSVTLKPAGFTVEKMSARGLPSLARASPSSFKIVASGVKKIKTDKPFGVNGSM 231
MAASVMLS VTLKPAGFTVEKMSARGLPSL RASPSSF+IVASGVKKIKTDKPFGVNGSM
Sbjct: 1 MAASVMLSPVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIKTDKPFGVNGSM 60
Query: 232 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAV 411
DLRDGVDASGRKGKGYGVYKFVD+YGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAV
Sbjct: 61 DLRDGVDASGRKGKGYGVYKFVDEYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAV 120
Query: 412 TLAGILAGGALLVYNTSALAQ 474
TLAGILAGGALLVYNTSALAQ
Sbjct: 121 TLAGILAGGALLVYNTSALAQ 141
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,890,184,347,108
Number of Sequences: 15229318
Number of Extensions: 1890184347108
Number of Successful Extensions: 513779300
Number of sequences better than 0.0: 0
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