BLASTX 7.6.2
Query= UN16325 /QuerySize=1449
(1448 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G79050.1 | Symbols: | DNA repair protein recA... 486 2e-137
TAIR9_protein||AT1G79050.2 | Symbols: | DNA repair protein recA... 304 1e-082
TAIR9_protein||AT1G79040.1 | Symbols: PSBR | PSBR (photosystem I... 263 2e-070
TAIR9_protein||AT2G19490.1 | Symbols: | recA family protein | c... 187 2e-047
TAIR9_protein||AT3G32920.1 | Symbols: | ATP binding / DNA bindi... 130 3e-030
TAIR9_protein||AT3G10140.1 | Symbols: RECA3 | RECA3 (recA homolo... 121 2e-027
>TAIR9_protein||AT1G79050.1 | Symbols: | DNA repair protein recA |
chr1:29737084-29740140 REVERSE
Length = 440
Score = 486 bits (1250), Expect = 2e-137
Identities = 248/260 (95%), Positives = 252/260 (96%)
Frame = -2
Query: 1447 YSKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQ 1268
YSKALGVDVENLIVCQPDNGEMALE ADRMCRS AVDLICVDSVSALTPRAEIEGEIGMQ
Sbjct: 179 YSKALGVDVENLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQ 238
Query: 1267 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 1088
QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR
Sbjct: 239 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 298
Query: 1087 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 908
LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI
Sbjct: 299 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCAEI 358
Query: 907 MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPSLQDEIEKRVRLSMLDGEVHRSTPLFS 728
MEVVVKKGSWYSYEDQRLGQGREKALQHLRENP+LQDEIEK+VRL MLDGEVHRSTPL S
Sbjct: 359 MEVVVKKGSWYSYEDQRLGQGREKALQHLRENPALQDEIEKKVRLLMLDGEVHRSTPLMS 418
Query: 727 SSSSSVSHDEEGEEDALGEF 668
SSSSS SH EE EED+L +F
Sbjct: 419 SSSSSASHREEEEEDSLDDF 438
>TAIR9_protein||AT1G79050.2 | Symbols: | DNA repair protein recA |
chr1:29737364-29740140 REVERSE
Length = 344
Score = 304 bits (777), Expect = 1e-082
Identities = 156/159 (98%)
Frame = -2
Query: 1447 YSKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQ 1268
YSKALGVDVENLIVCQPDNGEMALE ADRMCRS AVDLICVDSVSALTPRAEIEGEIGMQ
Sbjct: 179 YSKALGVDVENLIVCQPDNGEMALETADRMCRSGAVDLICVDSVSALTPRAEIEGEIGMQ 238
Query: 1267 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 1088
QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR
Sbjct: 239 QMGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVR 298
Query: 1087 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAE 971
LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQ E
Sbjct: 299 LEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQEE 337
>TAIR9_protein||AT1G79040.1 | Symbols: PSBR | PSBR (photosystem II subunit R) |
chr1:29736085-29736781 FORWARD
Length = 141
Score = 263 bits (671), Expect = 2e-070
Identities = 133/142 (93%), Positives = 136/142 (95%), Gaps = 1/142 (0%)
Frame = +1
Query: 52 MAASVMLSSVTLKPAGFTVEKMSARGLPSLARASPSSFKIVASGVKKIKTDKPFGVNGSM 231
MAASVMLSSVTLKPAGFTVEK +ARGLPSL RA P SFKIVASGVKKIKTDKPFG+NGSM
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKTAARGLPSLTRARP-SFKIVASGVKKIKTDKPFGINGSM 59
Query: 232 DLRDGVDASGRKGKGYGVYKFVDKYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAV 411
DLRDGVDASGRKGKGYGVYK+VDKYGANVDGYSPIYNE EWSASGDVYKGGVTGLAIWAV
Sbjct: 60 DLRDGVDASGRKGKGYGVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAV 119
Query: 412 TLAGILAGGALLVYNTSALAQ* 477
TLAGILAGGALLVYNTSALAQ*
Sbjct: 120 TLAGILAGGALLVYNTSALAQ* 141
>TAIR9_protein||AT2G19490.1 | Symbols: | recA family protein |
chr2:8441732-8444006 FORWARD
Length = 431
Score = 187 bits (474), Expect = 2e-047
Identities = 100/233 (42%), Positives = 159/233 (68%), Gaps = 6/233 (2%)
Frame = -2
Query: 1444 SKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQQ 1265
+KA+GV+ ENL++ QPD GE AL + D + RS +VD+I VDSV+AL P+ E+EGE+G
Sbjct: 157 AKAIGVNTENLLLSQPDCGEQALSLVDTLIRSGSVDVIVVDSVAALVPKGELEGEMGDAH 216
Query: 1264 MGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVY--YGNP-EVTSGGIALKFFAS 1094
M +QARLMSQALRK+S + S + LIF+NQ+R K+ + +G P EVT GG ALKF+AS
Sbjct: 217 MAMQARLMSQALRKLSHSLSLSQTLLIFINQVRSKLSTFGGFGGPTEVTCGGNALKFYAS 276
Query: 1093 VRLEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCA 914
+RL I+ G IK KG+E G + V++ K+K++ P++ A+FE+ FG+G+ K+ ++D +
Sbjct: 277 MRLNIKRIGLIK--KGEETTGSQVSVKIVKNKLAPPFRTAQFELEFGKGICKITEIIDLS 334
Query: 913 EIMEVVVKKGSWYSYEDQRLGQGREKALQHLRENPSLQDEIEKRVRLSMLDGE 755
+ + K G++Y+ + G+E + L++N S Q+E+ K+++ ++ E
Sbjct: 335 IKHKFIAKNGTFYNLNGKNY-HGKEALKRFLKQNESDQEELMKKLQDKLIADE 386
>TAIR9_protein||AT3G32920.1 | Symbols: | ATP binding / DNA binding /
DNA-dependent ATPase/ nucleoside-triphosphatase/ nucleotide binding |
chr3:13485399-13486713 REVERSE
Length = 227
Score = 130 bits (325), Expect = 3e-030
Identities = 70/135 (51%), Positives = 97/135 (71%), Gaps = 5/135 (3%)
Frame = -2
Query: 1444 SKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQQ 1265
+KA+GV+ ENL++ QPD G+ AL + D + +S +VD+I VDSV+AL P+ E++GE+G
Sbjct: 64 AKAIGVNTENLLLSQPDCGKQALSLVDTLIQSGSVDVIVVDSVAALVPKGELDGEMGDAH 123
Query: 1264 MGLQARLMSQALRKMSGNASKAGCTLIFLNQIRYKIGVYYGNPEVTSGGIALKFFASVRL 1085
M +QARLMSQALRK S + + LIF+NQ+R + G G EVTSGG ALKF+A +RL
Sbjct: 124 MAIQARLMSQALRKFSHSLLLSQTLLIFINQVRERFG---GPTEVTSGGNALKFYAPMRL 180
Query: 1084 EIRSAGKIKSSKGDE 1040
+I+ G IK KG+E
Sbjct: 181 DIKRIGLIK--KGEE 193
>TAIR9_protein||AT3G10140.1 | Symbols: RECA3 | RECA3 (recA homolog 3); ATP
binding / DNA binding / DNA-dependent ATPase/
nucleoside-triphosphatase/ nucleotide binding | chr3:3134984-3137069
FORWARD
Length = 390
Score = 121 bits (301), Expect = 2e-027
Identities = 75/221 (33%), Positives = 135/221 (61%), Gaps = 6/221 (2%)
Frame = -2
Query: 1444 SKALGVDVENLIVCQPDNGEMALEIADRMCRSSAVDLICVDSVSALTPRAEIEGEIGMQQ 1265
++++GV+ E L++ +P + E L I D + +S +VD+I VDSV+AL P+ E++ +G +
Sbjct: 161 AESIGVNTEELLISRPSSAEKMLNIVDVLTKSGSVDVIVVDSVAALAPQCELDAPVGERY 220
Query: 1264 MGLQARLMSQALRKMSGNASKAGCTLIFLNQIR--YKIGVYYGN-PEVTSGGIALKFFAS 1094
Q+R+M+QALRK+ + + ++FLNQ+R K +++ + EVT GG AL F A+
Sbjct: 221 RDTQSRIMTQALRKIHYSVGYSQTLIVFLNQVRSHVKSNMHFPHAEEVTCGGNALPFHAA 280
Query: 1093 VRLEIRSAGKIKSSKGDEDIGLRARVRVQKSKVSRPYKQAEFEIMFGEGVSKLGCVLDCA 914
+RL++ G IK++ ++ GL V+V K+K++ K++E I FG G VL+ A
Sbjct: 281 IRLKMIRTGLIKTA--NKISGLNVCVQVVKNKLAPGKKKSELGIHFGHGFYVEREVLELA 338
Query: 913 EIMEVVVKKGSWYSYEDQRLGQGREKALQHLRENPSLQDEI 791
V++++G+ Y E + + +G++ A ++L EN D +
Sbjct: 339 CEHGVILREGTSYFIEGEVI-EGKDAAEKYLVENKEALDTV 378
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,555,687,411
Number of Sequences: 33410
Number of Extensions: 8555687411
Number of Successful Extensions: 306270863
Number of sequences better than 0.0: 0
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