BLASTX 7.6.2
Query= UN16326 /QuerySize=1003
(1002 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G28640.1 | Symbols: AN3, GIF, GIF1 | AN3 (ANGU... 379 2e-105
TAIR9_protein||AT4G00850.1 | Symbols: GIF3 | GIF3 (GRF1-INTERACT... 105 7e-023
TAIR9_protein||AT1G01160.1 | Symbols: GIF2 | SSXT protein-relate... 101 8e-022
TAIR9_protein||AT1G01160.2 | Symbols: GIF2 | SSXT protein-relate... 84 1e-016
>TAIR9_protein||AT5G28640.1 | Symbols: AN3, GIF, GIF1 | AN3 (ANGUSTIFOLIA 3);
protein binding / transcription coactivator | chr5:10647831-10649620
REVERSE
Length = 211
Score = 379 bits (972), Expect = 2e-105
Identities = 192/212 (90%), Positives = 200/212 (94%), Gaps = 5/212 (2%)
Frame = +1
Query: 142 MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 321
MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR
Sbjct: 1 MQQHLMQMQPMMAGYYPSNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 60
Query: 322 NLMYLAAIADSQPQPPSMHSQYGSGGGGLVQGEGGSHYLQQQQATQHQQQMTQQSLMAAR 501
NLMYLAAIADSQPQPPS+HSQYGS GGG++QGEGGSHYLQQQQATQ QQQMTQQSLMAAR
Sbjct: 61 NLMYLAAIADSQPQPPSVHSQYGSAGGGMIQGEGGSHYLQQQQATQ-QQQMTQQSLMAAR 119
Query: 502 TSSMMYAQQQQQQPYATLQHQQLHHSQLGMSSTS-GGGSSGIHILQGEAGGFHEFGRGKL 678
+S + QQQQQQPYATLQHQQLHHSQLGMSS+S GGGSSG+HILQGEAGGFH+FGRGK
Sbjct: 120 SSMLYAQQQQQQQPYATLQHQQLHHSQLGMSSSSGGGGSSGLHILQGEAGGFHDFGRGKP 179
Query: 679 EMGS---GEGRGGSSGDGGETLYLKSSDDGN* 765
EMGS GEGRGGSSGDGGETLYLKSSDDGN*
Sbjct: 180 EMGSGGGGEGRGGSSGDGGETLYLKSSDDGN* 211
>TAIR9_protein||AT4G00850.1 | Symbols: GIF3 | GIF3 (GRF1-INTERACTING FACTOR 3);
protein binding / transcription coactivator | chr4:357675-358928
FORWARD
Length = 224
Score = 105 bits (260), Expect = 7e-023
Identities = 76/211 (36%), Positives = 109/211 (51%), Gaps = 22/211 (10%)
Frame = +1
Query: 148 QHLMQMQPMMAGYYP--SNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 321
Q QM PM+ +P +N+T++ IQ+YLDENK LI+ I+E+QN GKL+ECA+ QA LQ+
Sbjct: 2 QQSPQMIPMVLPSFPPTNNITTEQIQKYLDENKKLIMAILENQNLGKLAECAQYQALLQK 61
Query: 322 NLMYLAAIADSQPQPP-------SMHSQYGSGGGGLVQGEGGSHYLQQQQATQHQQQMTQ 480
NLMYLAAIAD+QPQPP +M Q + +Q S+++QQ QA QQ+
Sbjct: 62 NLMYLAAIADAQPQPPAATLTSGAMTPQAMAPNPSSMQ-PPPSYFMQQHQAVGMAQQI-P 119
Query: 481 QSLMAARTSSMMYAQQQQQQPYATLQHQQLHHSQLGMSSTSGGGSSGIH---------IL 633
+ R + Q P L HQQ +G+ ++G+ +
Sbjct: 120 PGIFPPRGPLQFGSPHQFLDPQQQL-HQQAMQGHMGIRPMGLNNNNGLQHQMHHHETALA 178
Query: 634 QGEAGGFHEFGRGKLEMGSGEGRGGSSGDGG 726
AG G GK + G+ + G+ G GG
Sbjct: 179 ANNAGPNDASGGGKPD-GTNMSQSGADGQGG 208
>TAIR9_protein||AT1G01160.1 | Symbols: GIF2 | SSXT protein-related /
transcription co-activator-related | chr1:72583-73883 FORWARD
Length = 196
Score = 101 bits (251), Expect = 8e-022
Identities = 71/193 (36%), Positives = 99/193 (51%), Gaps = 11/193 (5%)
Frame = +1
Query: 145 QQHLMQMQPMMAGYYP-SNVTSDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQR 321
QQ QM PM+ P +N+T++ IQ+YLDENK LI+ I+E+QN GKL+ECA+ QA LQ+
Sbjct: 3 QQQSPQMFPMVPSIPPANNITTEQIQKYLDENKKLIMAIMENQNLGKLAECAQYQALLQK 62
Query: 322 NLMYLAAIADSQPQPPSMHSQYGSGGGGLVQGEGGSHYLQQQQATQHQQ--QMTQQSLMA 495
NLMYLAAIAD+QP PP+ G V + + + Q + Q Q + + A
Sbjct: 63 NLMYLAAIADAQPPPPTP----GPSPSTAVAAQMATPHSGMQPPSYFMQHPQASPAGIFA 118
Query: 496 ARTSSMMYAQQQQQQPYATLQ-HQQLHHSQLG---MSSTSGGGSSGIHILQGEAGGFHEF 663
R + Q Q P Q HQQ +G M T+ G + + GG
Sbjct: 119 PRGPLQFGSPLQFQDPQQQQQIHQQAMQGHMGIRPMGMTNNGMQHAMQQPETGLGGNVGL 178
Query: 664 GRGKLEMGSGEGR 702
GK + G+G+
Sbjct: 179 RGGKQDGADGQGK 191
>TAIR9_protein||AT1G01160.2 | Symbols: GIF2 | SSXT protein-related /
transcription co-activator-related | chr1:72583-73883 FORWARD
Length = 230
Score = 84 bits (207), Expect = 1e-016
Identities = 60/166 (36%), Positives = 82/166 (49%), Gaps = 10/166 (6%)
Frame = +1
Query: 223 YLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADSQPQPPSMHSQYGSGGG 402
YLDENK LI+ I+E+QN GKL+ECA+ QA LQ+NLMYLAAIAD+QP PP+ G
Sbjct: 64 YLDENKKLIMAIMENQNLGKLAECAQYQALLQKNLMYLAAIADAQPPPPTP----GPSPS 119
Query: 403 GLVQGEGGSHYLQQQQATQHQQ--QMTQQSLMAARTSSMMYAQQQQQQPYATLQ-HQQLH 573
V + + + Q + Q Q + + A R + Q Q P Q HQQ
Sbjct: 120 TAVAAQMATPHSGMQPPSYFMQHPQASPAGIFAPRGPLQFGSPLQFQDPQQQQQIHQQAM 179
Query: 574 HSQLG---MSSTSGGGSSGIHILQGEAGGFHEFGRGKLEMGSGEGR 702
+G M T+ G + + GG GK + G+G+
Sbjct: 180 QGHMGIRPMGMTNNGMQHAMQQPETGLGGNVGLRGGKQDGADGQGK 225
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,555,687,411
Number of Sequences: 33410
Number of Extensions: 8555687411
Number of Successful Extensions: 306270863
Number of sequences better than 0.0: 0
|