BLASTX 7.6.2
Query= UN16328 /QuerySize=969
(968 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|A4FV84|MRT4_BOVIN mRNA turnover protein 4 homolog OS=Bos taur... 213 2e-054
sp|Q9UKD2|MRT4_HUMAN mRNA turnover protein 4 homolog OS=Homo sap... 211 9e-054
sp|Q9D0I8|MRT4_MOUSE mRNA turnover protein 4 homolog OS=Mus musc... 208 6e-053
sp|Q86HD3|MRT4_DICDI mRNA turnover protein 4 homolog OS=Dictyost... 171 6e-042
sp|Q9USZ6|MRT4_SCHPO mRNA turnover protein 4 homolog OS=Schizosa... 104 1e-021
sp|P33201|MRT4_YEAST mRNA turnover protein 4 OS=Saccharomyces ce... 101 1e-020
sp|Q7S302|MRT4_NEUCR mRNA turnover protein 4 homolog OS=Neurospo... 99 4e-020
sp|Q6FJ04|MRT4_CANGA mRNA turnover protein 4 homolog OS=Candida ... 98 9e-020
sp|Q75DK9|MRT4_ASHGO mRNA turnover protein 4 homolog OS=Ashbya g... 94 1e-018
sp|P15826|RLA0_METVS Acidic ribosomal protein P0 homolog OS=Meth... 62 4e-009
sp|A9A838|RLA0_METM6 Acidic ribosomal protein P0 homolog OS=Meth... 61 1e-008
sp|A6VIP9|RLA0_METM7 Acidic ribosomal protein P0 homolog OS=Meth... 61 1e-008
sp|A4FZS8|RLA0_METM5 Acidic ribosomal protein P0 homolog OS=Meth... 60 2e-008
sp|P54049|RLA0_METJA Acidic ribosomal protein P0 homolog OS=Meth... 54 1e-006
sp|O52705|RLA0_METTL Acidic ribosomal protein P0 homolog OS=Meth... 53 3e-006
sp|A6UTF8|RLA0_META3 Acidic ribosomal protein P0 homolog OS=Meth... 52 7e-006
>sp|A4FV84|MRT4_BOVIN mRNA turnover protein 4 homolog OS=Bos taurus GN=MRTO4
PE=2 SV=1
Length = 239
Score = 213 bits (541), Expect = 2e-054
Identities = 105/225 (46%), Positives = 147/225 (65%), Gaps = 1/225 (0%)
Frame = +1
Query: 112 MPKSKRDRPVTLSKTKKKGREHKEGIVNGIREAVEKYNSVYVFSFENMRNIKFKEFRQKF 291
MPKSKRD+ V+L+KT KKG E K+ ++ +R+ V+ Y +++FS NMRN K K+ R +
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 292 RHNGKFFLGSNKVMQVALGRSASDEFRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAY 471
+H+ FF G NKVM VALGRS SDE++ + + SK L G+ GLL T+ KEEV+ F Y
Sbjct: 61 KHSRMFF-GKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVDEWFTKY 119
Query: 472 EDSDFSRTGSTTVETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEG 651
+ D++R G+ TV L GPLEQF H MEP LR+ G+P L KG V LLSD+ VC+EG
Sbjct: 120 TEMDYARAGNKATFTVNLDPGPLEQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEG 179
Query: 652 KPLSPESSRILRLLGIKLATFKLNLVCRWSPNDFELYREGLDLSD 786
L+PE +R+L+L G ++A FK+++ W + G DL +
Sbjct: 180 DVLTPEQARVLKLFGYEMAEFKVSIKYMWDAQSGRFQQMGDDLPE 224
>sp|Q9UKD2|MRT4_HUMAN mRNA turnover protein 4 homolog OS=Homo sapiens GN=MRTO4
PE=1 SV=2
Length = 239
Score = 211 bits (535), Expect = 9e-054
Identities = 104/225 (46%), Positives = 145/225 (64%), Gaps = 1/225 (0%)
Frame = +1
Query: 112 MPKSKRDRPVTLSKTKKKGREHKEGIVNGIREAVEKYNSVYVFSFENMRNIKFKEFRQKF 291
MPKSKRD+ V+L+KT KKG E K+ ++ +R+ V+ Y +++FS NMRN K K+ R +
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 292 RHNGKFFLGSNKVMQVALGRSASDEFRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAY 471
+H+ FF G NKVM VALGRS SDE++ + + SK L G+ GLL T+ KEEV F Y
Sbjct: 61 KHSRMFF-GKNKVMMVALGRSPSDEYKDNLHQVSKRLRGEVGLLFTNRTKEEVNEWFTKY 119
Query: 472 EDSDFSRTGSTTVETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEG 651
+ D++R G+ TV L GPLEQF H MEP LR+ G+P L +G V LLSD+ VC+EG
Sbjct: 120 TEMDYARAGNKAAFTVSLDPGPLEQFPHSMEPQLRQLGLPTALKRGVVTLLSDYEVCKEG 179
Query: 652 KPLSPESSRILRLLGIKLATFKLNLVCRWSPNDFELYREGLDLSD 786
L+PE +R+L+L G ++A FK+ + W + G DL +
Sbjct: 180 DVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRFQQMGDDLPE 224
>sp|Q9D0I8|MRT4_MOUSE mRNA turnover protein 4 homolog OS=Mus musculus GN=Mrto4
PE=2 SV=1
Length = 239
Score = 208 bits (528), Expect = 6e-053
Identities = 103/209 (49%), Positives = 140/209 (66%), Gaps = 1/209 (0%)
Frame = +1
Query: 112 MPKSKRDRPVTLSKTKKKGREHKEGIVNGIREAVEKYNSVYVFSFENMRNIKFKEFRQKF 291
MPKSKRD+ V+L+KT KKG E K+ ++ +R+ V+ Y +++FS NMRN K K+ R +
Sbjct: 1 MPKSKRDKKVSLTKTAKKGLELKQNLIEELRKCVDTYKYLFIFSVANMRNSKLKDIRNAW 60
Query: 292 RHNGKFFLGSNKVMQVALGRSASDEFRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAY 471
+H+ FF G NKVM VALGRS SDE++ + + SK L G+ GLL T+ KEEV F Y
Sbjct: 61 KHSRMFF-GKNKVMMVALGRSPSDEYKDNLHQVSKKLRGEVGLLFTNRTKEEVNEWFTKY 119
Query: 472 EDSDFSRTGSTTVETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEG 651
+ DF+R G+ TV L GPL+QF H MEP LR+ G+P L KG V LLSD+ VC+EG
Sbjct: 120 TEMDFARAGNKATLTVSLDPGPLKQFPHSMEPQLRQLGLPTALKKGVVTLLSDYEVCKEG 179
Query: 652 KPLSPESSRILRLLGIKLATFKLNLVCRW 738
L+PE +RIL+L G ++A FK+ + W
Sbjct: 180 DVLTPEQARILKLFGYEMAEFKVIIKYMW 208
>sp|Q86HD3|MRT4_DICDI mRNA turnover protein 4 homolog OS=Dictyostelium
discoideum GN=mrt4 PE=3 SV=1
Length = 223
Score = 171 bits (433), Expect = 6e-042
Identities = 83/219 (37%), Positives = 134/219 (61%), Gaps = 1/219 (0%)
Frame = +1
Query: 112 MPKSKRDRPVTLSKTKKKGREHKEGIVNGIREAVEKYNSVYVFSFENMRNIKFKEFRQKF 291
M KSKR+ V ++K K E K+ +V+ I++ V++Y +Y+F+FENMRN K K R ++
Sbjct: 1 MVKSKRNVVVNMTKVTKNPGEKKKKLVSTIKDIVDQYKFIYLFTFENMRNNKLKSVRTEW 60
Query: 292 RHNGKFFLGSNKVMQVALGRSASDEFRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAY 471
KF G NKV+ V LG+S DE +P + K ++ L G+ GL T+ PK++V F Y
Sbjct: 61 -STSKFLFGKNKVLSVGLGKSEEDELKPNLHKLTEHLEGECGLFFTNEPKDKVFEYFTNY 119
Query: 472 EDSDFSRTGSTTVETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEG 651
+ DF R+G + ET+ +KEGP+ TH ME +LR G+P L G + + ++ +CE G
Sbjct: 120 SEKDFPRSGFVSEETITIKEGPIVGMTHSMETYLRGLGLPTTLKNGVIFVDREYTLCEAG 179
Query: 652 KPLSPESSRILRLLGIKLATFKLNLVCRWSPNDFELYRE 768
++PE S++L+L +++ FK ++ W+ ++F L E
Sbjct: 180 VAVTPEQSQLLKLFNHEISEFKFHIKGFWNEDEFTLCEE 218
>sp|Q9USZ6|MRT4_SCHPO mRNA turnover protein 4 homolog OS=Schizosaccharomyces
pombe GN=SPBC11G11.03 PE=2 SV=1
Length = 241
Score = 104 bits (258), Expect = 1e-021
Identities = 49/143 (34%), Positives = 86/143 (60%), Gaps = 1/143 (0%)
Frame = +1
Query: 112 MPKSKRDRPVTLSKTKKKGREHKEGIVNGIREAVEKYNSVYVFSFENMRNIKFKEFRQKF 291
MPKS+R + +TL++T+KKG E K + +G++++++ ++ +++F NMRN K R +
Sbjct: 1 MPKSRRSKVLTLAQTEKKGHEGKAALFSGVQQSLDSFDYMWIFDVTNMRNTYLKRIRDDW 60
Query: 292 RHNGKFFLGSNKVMQVALGRSASDEFRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAY 471
+ + F+G KVM ALG + +E + K +K+LHG GLL T+ +EV F ++
Sbjct: 61 K-GSRIFMGKTKVMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPDEVIGYFESF 119
Query: 472 EDSDFSRTGSTTVETVELKEGPL 540
+DF+R G+ T + GP+
Sbjct: 120 VQNDFARAGAVAPFTHVIPAGPV 142
>sp|P33201|MRT4_YEAST mRNA turnover protein 4 OS=Saccharomyces cerevisiae
GN=MRT4 PE=1 SV=1
Length = 236
Score = 101 bits (249), Expect = 1e-020
Identities = 53/141 (37%), Positives = 82/141 (58%), Gaps = 1/141 (0%)
Frame = +1
Query: 112 MPKSKRDRPVTLSKTKKKGREHKEGIVNGIREAVEKYNSVYVFSFENMRNIKFKEFRQKF 291
MP+SKR + VTL++T KKGRE+KE I + +REA++ Y V+V +++R +E R +
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTYRYVWVLHLDDVRTPVLQEIRTSW 60
Query: 292 RHNGKFFLGSNKVMQVALGRSASDEFRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAY 471
K +G KV+Q ALG +E++ +++ SK+ G GLL TD V+ F +Y
Sbjct: 61 A-GSKLIMGKRKVLQKALGEKREEEYKENLYQLSKLCSGVTGLLFTDEDVNTVKEYFKSY 119
Query: 472 EDSDFSRTGSTTVETVELKEG 534
SD+SR + T + EG
Sbjct: 120 VRSDYSRPNTKAPLTFTIPEG 140
>sp|Q7S302|MRT4_NEUCR mRNA turnover protein 4 homolog OS=Neurospora crassa
GN=NCU07547 PE=3 SV=1
Length = 252
Score = 99 bits (245), Expect = 4e-020
Identities = 53/143 (37%), Positives = 76/143 (53%), Gaps = 1/143 (0%)
Frame = +1
Query: 112 MPKSKRDRPVTLSKTKKKGREHKEGIVNGIREAVEKYNSVYVFSFENMRNIKFKEFRQKF 291
MPKSKR + L++ KK RE KE + IRE + Y +VFS +NMRN K+ R++
Sbjct: 1 MPKSKRAKVYNLTQVTKKNREQKEKLFENIRECIPNYQHCFVFSIDNMRNNYLKDVRKEL 60
Query: 292 RHNGKFFLGSNKVMQVALGRSASDEFRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAY 471
++ + F G K+ ALG + D G+ K SK L G GL+ T+ E++ F
Sbjct: 61 -NDCRIFFGKTKLTARALGTTPEDAQADGLDKLSKYLSGSVGLIFTNRDPSEIKDYFVNL 119
Query: 472 EDSDFSRTGSTTVETVELKEGPL 540
DF+R GS T+ + GPL
Sbjct: 120 TQVDFARAGSVATRTITIPSGPL 142
>sp|Q6FJ04|MRT4_CANGA mRNA turnover protein 4 homolog OS=Candida glabrata
GN=MRT4 PE=3 SV=1
Length = 239
Score = 98 bits (242), Expect = 9e-020
Identities = 53/141 (37%), Positives = 82/141 (58%), Gaps = 1/141 (0%)
Frame = +1
Query: 112 MPKSKRDRPVTLSKTKKKGREHKEGIVNGIREAVEKYNSVYVFSFENMRNIKFKEFRQKF 291
MP+SKR + VTL++T KKGRE+KE I + +REA++ Y V+V +++R +E R+ +
Sbjct: 1 MPRSKRSKLVTLAQTDKKGRENKERIFDEVREALDTYKYVFVLQLDDVRTPVLQEIREAW 60
Query: 292 RHNGKFFLGSNKVMQVALGRSASDEFRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAY 471
K +G KV++ ALG + E++ + K +K G GLL T+ + V+ F AY
Sbjct: 61 -VGSKLLMGKRKVLEKALGTTREQEYKENLSKLTKYCSGVIGLLFTNETLDTVKEYFEAY 119
Query: 472 EDSDFSRTGSTTVETVELKEG 534
D+SR S T E+ EG
Sbjct: 120 SRLDYSRPNSRAPITFEVPEG 140
>sp|Q75DK9|MRT4_ASHGO mRNA turnover protein 4 homolog OS=Ashbya gossypii GN=MRT4
PE=3 SV=1
Length = 236
Score = 94 bits (233), Expect = 1e-018
Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 1/141 (0%)
Frame = +1
Query: 112 MPKSKRDRPVTLSKTKKKGREHKEGIVNGIREAVEKYNSVYVFSFENMRNIKFKEFRQKF 291
MP+SKR + VTL++T+KKGRE+KE I + +R+A++ Y V+V E++R +E R +
Sbjct: 1 MPRSKRSKLVTLAQTEKKGRENKERIFDEVRQALDTYRYVWVLRLEDVRTPVLQEIRSAW 60
Query: 292 RHNGKFFLGSNKVMQVALGRSASDEFRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAY 471
K +G KV++ ALG + E++ + K G GLL TD E V + F Y
Sbjct: 61 A-GSKLIMGRRKVLEKALGGTRETEYKENVSGLVKQCEGMCGLLFTDETPETVTAYFREY 119
Query: 472 EDSDFSRTGSTTVETVELKEG 534
+D+SR S VE+ G
Sbjct: 120 RKADYSRAKSRAPLRVEIPAG 140
>sp|P15826|RLA0_METVS Acidic ribosomal protein P0 homolog OS=Methanococcus
vannielii (strain SB / ATCC 35089 / DSM 1224) GN=rplP0 PE=1 SV=2
Length = 336
Score = 62 bits (150), Expect = 4e-009
Identities = 49/197 (24%), Positives = 89/197 (45%), Gaps = 6/197 (3%)
Frame = +1
Query: 148 SKTKKKGREHKEGIVNGIREAVEKYNSVYVFSFENMRNIKFKEFRQKFRHNGKFFLGSNK 327
+K++ K K VN ++E ++ N + + + ++ +E R K R + N
Sbjct: 4 AKSEHKIAPWKIEEVNALKELLKSANVIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNT 63
Query: 328 VMQVALGRSASDEFRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAYEDSDFS---RTG 498
+++ A+ A + P K L A ++VT+M LF E+S + G
Sbjct: 64 LIKRAVEEVAEETGNPEFAKLVDYLDKGAAIVVTEM---NPFKLFKTLEESKSPAPIKGG 120
Query: 499 STTVETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEGKPLSPESSR 678
+ +E+K G L+ G+P ++KG + + D VV +EG +SP+ +
Sbjct: 121 AIAPCDIEVKSGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVAKEGDVISPKLAV 180
Query: 679 ILRLLGIKLATFKLNLV 729
+L LGIK T LN++
Sbjct: 181 VLSALGIKPVTVGLNVL 197
>sp|A9A838|RLA0_METM6 Acidic ribosomal protein P0 homolog OS=Methanococcus
maripaludis (strain C6 / ATCC BAA-1332) GN=rplP0 PE=3 SV=1
Length = 335
Score = 61 bits (146), Expect = 1e-008
Identities = 44/194 (22%), Positives = 89/194 (45%)
Frame = +1
Query: 148 SKTKKKGREHKEGIVNGIREAVEKYNSVYVFSFENMRNIKFKEFRQKFRHNGKFFLGSNK 327
+K++ K K VN ++E ++ + + + + ++ +E R K R + N
Sbjct: 4 AKSEHKIAPWKIEEVNALKELLKSTSIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNT 63
Query: 328 VMQVALGRSASDEFRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAYEDSDFSRTGSTT 507
+M+ A+ A + P K + L A ++ T+M ++ + + + G+T
Sbjct: 64 LMKRAIEEVAEETGNPEFAKLADYLDKGAAIIATEMNPFKLFKTLDESKSPAPVKGGATA 123
Query: 508 VETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEGKPLSPESSRILR 687
+E+K G L+ G+P ++KG + + D VV +EG+ +S + + +L
Sbjct: 124 PCDIEVKAGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVIKEGEVVSQKLAVVLS 183
Query: 688 LLGIKLATFKLNLV 729
LGIK T LN++
Sbjct: 184 ALGIKPVTVGLNVL 197
>sp|A6VIP9|RLA0_METM7 Acidic ribosomal protein P0 homolog OS=Methanococcus
maripaludis (strain C7 / ATCC BAA-1331) GN=rplP0 PE=3 SV=1
Length = 335
Score = 61 bits (146), Expect = 1e-008
Identities = 44/194 (22%), Positives = 89/194 (45%)
Frame = +1
Query: 148 SKTKKKGREHKEGIVNGIREAVEKYNSVYVFSFENMRNIKFKEFRQKFRHNGKFFLGSNK 327
+K++ K K VN ++E ++ + + + + ++ +E R K R + N
Sbjct: 4 AKSEHKIAPWKIEEVNALKELLKSTSIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNT 63
Query: 328 VMQVALGRSASDEFRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAYEDSDFSRTGSTT 507
+M+ A+ A + P K + L A ++ T+M ++ + + + G+T
Sbjct: 64 LMKRAIEEVAEETGNPEFAKLADYLDKGAAIIATEMNPFKLFKTLDESKSPAPVKGGATA 123
Query: 508 VETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEGKPLSPESSRILR 687
+E+K G L+ G+P ++KG + + D VV +EG+ +S + + +L
Sbjct: 124 PCDIEVKAGSTGMPPGPFLSELKAVGIPAAIDKGKIGIKEDKVVVKEGEVVSQKLAVVLS 183
Query: 688 LLGIKLATFKLNLV 729
LGIK T LN++
Sbjct: 184 ALGIKPVTVGLNVL 197
>sp|A4FZS8|RLA0_METM5 Acidic ribosomal protein P0 homolog OS=Methanococcus
maripaludis (strain C5 / ATCC BAA-1333) GN=rplP0 PE=3 SV=1
Length = 335
Score = 60 bits (144), Expect = 2e-008
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 12/200 (6%)
Frame = +1
Query: 148 SKTKKKGREHKEGIVNGIREAVEKYNSVYVFSFENMRNIKFKEFRQKFRHNGKFFLGSNK 327
+K++ K K VN ++E ++ + + + + ++ +E R K R + N
Sbjct: 4 AKSEHKIAPWKIEEVNALKELLKSSSIIALIDMMEVPAVQLQEIRDKIRDQMTLKMSRNT 63
Query: 328 VMQVALGRSASDEFRPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAYEDSDFSRT---- 495
+M+ A+ A + P K + A ++ T+M + F Y+ D S++
Sbjct: 64 LMKRAIEEVAEETGNPEFAKLVDYMDKGAAIIATEM------NPFKLYKTLDESKSPAPV 117
Query: 496 --GSTTVETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEGKPLSPE 669
G+ +E+K G L+ G+P ++KG + + D VV +EG+ +S +
Sbjct: 118 KGGAVAPCDIEIKAGSTGMPPGPFLSELKAVGLPAAIDKGKIGIKEDTVVVKEGEVVSQK 177
Query: 670 SSRILRLLGIKLATFKLNLV 729
S +L LGIK T LN++
Sbjct: 178 LSVVLSALGIKPVTVGLNVL 197
>sp|P54049|RLA0_METJA Acidic ribosomal protein P0 homolog OS=Methanocaldococcus
jannaschii GN=rplP0 PE=1 SV=2
Length = 338
Score = 54 bits (129), Expect = 1e-006
Identities = 38/155 (24%), Positives = 72/155 (46%)
Frame = +1
Query: 265 KFKEFRQKFRHNGKFFLGSNKVMQVALGRSASDEFRPGIFKASKMLHGDAGLLVTDMPKE 444
+ +E R K R K + N ++ AL +A + P + + + + A +LVTDM
Sbjct: 42 QLQEIRDKIRDKVKLRMSRNTLIIRALKEAAEELNNPKLAELANYVERGAAILVTDMNPF 101
Query: 445 EVESLFNAYEDSDFSRTGSTTVETVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGTVELL 624
++ L + R G +++++G L+ G+P + KG + +
Sbjct: 102 KLYKLLEENKSPAPVRGGQIAPCDIKVEKGSTGMPPGPFLGELKSVGIPAAIEKGKIAIK 161
Query: 625 SDFVVCEEGKPLSPESSRILRLLGIKLATFKLNLV 729
D VV ++G+ +SP+ + +L LGIK LN++
Sbjct: 162 EDKVVVKKGEVVSPKLAAVLDRLGIKPIKVGLNIL 196
>sp|O52705|RLA0_METTL Acidic ribosomal protein P0 homolog OS=Methanococcus
thermolithotrophicus GN=rplP0 PE=3 SV=1
Length = 338
Score = 53 bits (125), Expect = 3e-006
Identities = 40/183 (21%), Positives = 78/183 (42%)
Frame = +1
Query: 190 VNGIREAVEKYNSVYVFSFENMRNIKFKEFRQKFRHNGKFFLGSNKVMQVALGRSASDEF 369
VN ++E ++ V + + + +E R K R + N +++ A+ A +
Sbjct: 18 VNKLKELLKNGQIVALVDMMEVPARQLQEIRDKIRGTMTLKMSRNTLIERAIKEVAEETG 77
Query: 370 RPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAYEDSDFSRTGSTTVETVELKEGPLEQF 549
P K + + A ++ TDM ++ + + G+ +E+K G
Sbjct: 78 NPEFAKLADYIDKGAAIITTDMNPFKLYKTLEESKSPAPIKGGAVAPCDIEVKAGSTGMP 137
Query: 550 THEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEGKPLSPESSRILRLLGIKLATFKLNLV 729
L+ G+P + KG + + D VV + G+ +S + + +L LGIK T LNL+
Sbjct: 138 PGPFLGELKSVGIPAAIEKGKIGIKEDKVVAKAGEVVSHKLAVVLSALGIKPVTVGLNLL 197
Query: 730 CRW 738
+
Sbjct: 198 AAY 200
>sp|A6UTF8|RLA0_META3 Acidic ribosomal protein P0 homolog OS=Methanococcus
aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=rplP0 PE=3 SV=1
Length = 338
Score = 52 bits (122), Expect = 7e-006
Identities = 38/186 (20%), Positives = 83/186 (44%), Gaps = 6/186 (3%)
Frame = +1
Query: 190 VNGIREAVEKYNSVYVFSFENMRNIKFKEFRQKFRHNGKFFLGSNKVMQVALGRSASDEF 369
VN +++ +++ + + + ++ +E R R + N +++ A+ A +
Sbjct: 17 VNNLKKLLKEGQVIALVDMMEVPAVQLQEIRDNIRDLMTLRMSRNTLIKRAIEELAEESN 76
Query: 370 RPGIFKASKMLHGDAGLLVTDMPKEEVESLFNAYEDSDFS---RTGSTTVETVELKEGPL 540
P K ++ L A +++TDM L+ ED + G+ + ++ G
Sbjct: 77 DPKFAKLAECLERGAAIVITDM---NPFKLYKTLEDGKAPAPIKAGAIAPSDIVVEAGST 133
Query: 541 EQFTHEMEPFLRKQGMPVRLNKGTVELLSDFVVCEEGKPLSPESSRILRLLGIKLATFKL 720
L+ G+P ++KG + + D V+ +EG+ +SP+ + +L LGIK L
Sbjct: 134 GMPPGPFLGELKGAGLPAVIDKGKIAIKDDTVIVKEGEVVSPKVAVVLSALGIKPTKVGL 193
Query: 721 NLVCRW 738
+L+ +
Sbjct: 194 DLLAAY 199
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,946,960,590
Number of Sequences: 518415
Number of Extensions: 65946960590
Number of Successful Extensions: 470808347
Number of sequences better than 0.0: 0
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