BLASTX 7.6.2
Query= UN16346 /QuerySize=1103
(1102 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297827841|ref|XP_002881803.1| 40S ribosomal protein S2 [Arabi... 310 2e-082
gi|15227443|ref|NP_181715.1| 40S ribosomal protein S2-3 [Arabido... 303 4e-080
gi|18406325|ref|NP_564737.1| 40S ribosomal protein S2-2 [Arabido... 301 2e-079
gi|15217951|ref|NP_176134.1| 40S ribosomal protein S2-1 [Arabido... 301 2e-079
gi|8979936|gb|AAF82250.1|AC008051_1 Identical to gene XW6 from A... 301 2e-079
gi|21539457|gb|AAM53281.1| ribosomal protein S2, putative [Arabi... 301 2e-079
gi|21618011|gb|AAM67061.1| ribosomal protein S2, putative [Arabi... 301 2e-079
gi|343455555|gb|AEM36341.1| At1g58380 [Arabidopsis thaliana] 301 2e-079
gi|21553851|gb|AAM62944.1| 40S ribosomal protein S2 [Arabidopsis... 300 3e-079
gi|6566279|dbj|BAA88264.1| RF12 [Arabidopsis thaliana] 297 2e-078
gi|297837605|ref|XP_002886684.1| hypothetical protein ARALYDRAFT... 297 2e-078
gi|297820548|ref|XP_002878157.1| 40S ribosomal protein S2 [Arabi... 293 4e-077
gi|15230312|ref|NP_191308.1| 40S ribosomal protein S2-4 [Arabido... 293 5e-077
gi|224138034|ref|XP_002322713.1| predicted protein [Populus tric... 286 6e-075
gi|225441799|ref|XP_002283793.1| PREDICTED: hypothetical protein... 285 8e-075
gi|224090212|ref|XP_002308954.1| predicted protein [Populus tric... 285 1e-074
gi|168002136|ref|XP_001753770.1| predicted protein [Physcomitrel... 282 7e-074
gi|168056372|ref|XP_001780194.1| predicted protein [Physcomitrel... 281 2e-073
gi|307136141|gb|ADN33986.1| 40S ribosomal protein s2 [Cucumis me... 281 2e-073
gi|168065301|ref|XP_001784592.1| predicted protein [Physcomitrel... 281 2e-073
>gi|297827841|ref|XP_002881803.1| 40S ribosomal protein S2 [Arabidopsis lyrata
subsp. lyrata]
Length = 282
Score = 310 bits (794), Expect = 2e-082
Identities = 155/181 (85%), Positives = 166/181 (91%), Gaps = 7/181 (3%)
Frame = +2
Query: 62 AERGGE---QRGAVGERGGFGRGFGGGRGDRGGRGGPRGCGGRRGGRPAEEDKWTPVTKL 232
AERGGE +RG GERGG GRGFGGGRGDRGGRG RG GRRGGR +EE+KW PVTKL
Sbjct: 2 AERGGERGVERG--GERGGHGRGFGGGRGDRGGRG--RGGRGRRGGRTSEEEKWVPVTKL 57
Query: 233 GRLVKDGKIQKLEQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRTRFKA 412
GRLV DG+I+++EQIYLHSLPVKEYQIID+L+GPTLKDEVMKIMPVQKQTRAGQRTRFKA
Sbjct: 58 GRLVADGRIKQIEQIYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKA 117
Query: 413 FVVVGDTNGHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTG 592
FVVVGD NGHVGLGVKCSKEVATAIRG IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTG
Sbjct: 118 FVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTG 177
Query: 593 E 595
+
Sbjct: 178 K 178
>gi|15227443|ref|NP_181715.1| 40S ribosomal protein S2-3 [Arabidopsis thaliana]
Length = 285
Score = 303 bits (775), Expect = 4e-080
Identities = 155/184 (84%), Positives = 165/184 (89%), Gaps = 8/184 (4%)
Frame = +2
Query: 59 MAERGGE---QRGAVGERGGFGRGFG--GGRGDRGGRGGPRGCGGRRGGRPAEEDKWTPV 223
MAERGGE +RG GERG FGRGFG GGRGDRGGR G G GGRRGGR +EE+KW PV
Sbjct: 1 MAERGGERGVERG--GERGDFGRGFGGRGGRGDRGGR-GRGGRGGRRGGRASEEEKWVPV 57
Query: 224 TKLGRLVKDGKIQKLEQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRTR 403
TKLGRLV G I+++EQIYLHSLPVKEYQIID+L+GPTLKDEVMKIMPVQKQTRAGQRTR
Sbjct: 58 TKLGRLVAAGHIKQIEQIYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTR 117
Query: 404 FKAFVVVGDTNGHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCK 583
FKAFVVVGD NGHVGLGVKCSKEVATAIRG IILAKLSV+PVRRGYWGNKIGKPHTVPCK
Sbjct: 118 FKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 177
Query: 584 VTGE 595
VTG+
Sbjct: 178 VTGK 181
>gi|18406325|ref|NP_564737.1| 40S ribosomal protein S2-2 [Arabidopsis thaliana]
Length = 284
Score = 301 bits (769), Expect = 2e-079
Identities = 158/185 (85%), Positives = 163/185 (88%), Gaps = 11/185 (5%)
Frame = +2
Query: 59 MAERGGE---QRGAVGERGGFGRGFGGGRGDRGGRG---GPRGCGGRRGGRPAEEDKWTP 220
MAERGGE +RG G+RG FGRGFGGGRG GGRG GPRG GRRGGR +EE KW P
Sbjct: 1 MAERGGESGAERG--GDRGDFGRGFGGGRG--GGRGRDRGPRG-RGRRGGRASEETKWVP 55
Query: 221 VTKLGRLVKDGKIQKLEQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRT 400
VTKLGRLV D KI KLEQIYLHSLPVKEYQIID LVGPTLKDEVMKIMPVQKQTRAGQRT
Sbjct: 56 VTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRT 115
Query: 401 RFKAFVVVGDTNGHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPC 580
RFKAFVVVGD NGHVGLGVKCSKEVATAIRG IILAKLSV+PVRRGYWGNKIGKPHTVPC
Sbjct: 116 RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPC 175
Query: 581 KVTGE 595
KVTG+
Sbjct: 176 KVTGK 180
>gi|15217951|ref|NP_176134.1| 40S ribosomal protein S2-1 [Arabidopsis thaliana]
Length = 284
Score = 301 bits (769), Expect = 2e-079
Identities = 158/185 (85%), Positives = 163/185 (88%), Gaps = 11/185 (5%)
Frame = +2
Query: 59 MAERGGE---QRGAVGERGGFGRGFGGGRGDRGGRG---GPRGCGGRRGGRPAEEDKWTP 220
MAERGGE +RG G+RG FGRGFGGGRG GGRG GPRG GRRGGR +EE KW P
Sbjct: 1 MAERGGEGGAERG--GDRGDFGRGFGGGRG--GGRGRDRGPRG-RGRRGGRASEETKWVP 55
Query: 221 VTKLGRLVKDGKIQKLEQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRT 400
VTKLGRLV D KI KLEQIYLHSLPVKEYQIID LVGPTLKDEVMKIMPVQKQTRAGQRT
Sbjct: 56 VTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRT 115
Query: 401 RFKAFVVVGDTNGHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPC 580
RFKAFVVVGD NGHVGLGVKCSKEVATAIRG IILAKLSV+PVRRGYWGNKIGKPHTVPC
Sbjct: 116 RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPC 175
Query: 581 KVTGE 595
KVTG+
Sbjct: 176 KVTGK 180
>gi|8979936|gb|AAF82250.1|AC008051_1 Identical to gene XW6 from Arabidopsis
thaliana gb|AB008016 and contains a Ribosomal protein S5 PF|00333
domain. ESTs gb|T22200, gb|N38541, gb|T45263 come from this gene. This
gene is cut off
Length = 231
Score = 301 bits (769), Expect = 2e-079
Identities = 158/185 (85%), Positives = 163/185 (88%), Gaps = 11/185 (5%)
Frame = +2
Query: 59 MAERGGE---QRGAVGERGGFGRGFGGGRGDRGGRG---GPRGCGGRRGGRPAEEDKWTP 220
MAERGGE +RG G+RG FGRGFGGGRG GGRG GPRG GRRGGR +EE KW P
Sbjct: 1 MAERGGEGGAERG--GDRGDFGRGFGGGRG--GGRGRDRGPRG-RGRRGGRASEETKWVP 55
Query: 221 VTKLGRLVKDGKIQKLEQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRT 400
VTKLGRLV D KI KLEQIYLHSLPVKEYQIID LVGPTLKDEVMKIMPVQKQTRAGQRT
Sbjct: 56 VTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRT 115
Query: 401 RFKAFVVVGDTNGHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPC 580
RFKAFVVVGD NGHVGLGVKCSKEVATAIRG IILAKLSV+PVRRGYWGNKIGKPHTVPC
Sbjct: 116 RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPC 175
Query: 581 KVTGE 595
KVTG+
Sbjct: 176 KVTGK 180
>gi|21539457|gb|AAM53281.1| ribosomal protein S2, putative [Arabidopsis
thaliana]
Length = 284
Score = 301 bits (769), Expect = 2e-079
Identities = 158/185 (85%), Positives = 163/185 (88%), Gaps = 11/185 (5%)
Frame = +2
Query: 59 MAERGGE---QRGAVGERGGFGRGFGGGRGDRGGRG---GPRGCGGRRGGRPAEEDKWTP 220
MAERGGE +RG G+RG FGRGFGGGRG GGRG GPRG GRRGGR +EE KW P
Sbjct: 1 MAERGGESGAERG--GDRGDFGRGFGGGRG--GGRGRDRGPRG-RGRRGGRASEETKWVP 55
Query: 221 VTKLGRLVKDGKIQKLEQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRT 400
VTKLGRLV D KI KLEQIYLHSLPVKEYQIID LVGPTLKDEVMKIMPVQKQTRAGQRT
Sbjct: 56 VTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRT 115
Query: 401 RFKAFVVVGDTNGHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPC 580
RFKAFVVVGD NGHVGLGVKCSKEVATAIRG IILAKLSV+PVRRGYWGNKIGKPHTVPC
Sbjct: 116 RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPC 175
Query: 581 KVTGE 595
KVTG+
Sbjct: 176 KVTGK 180
>gi|21618011|gb|AAM67061.1| ribosomal protein S2, putative [Arabidopsis
thaliana]
Length = 284
Score = 301 bits (769), Expect = 2e-079
Identities = 158/185 (85%), Positives = 163/185 (88%), Gaps = 11/185 (5%)
Frame = +2
Query: 59 MAERGGE---QRGAVGERGGFGRGFGGGRGDRGGRG---GPRGCGGRRGGRPAEEDKWTP 220
MAERGGE +RG G+RG FGRGFGGGRG GGRG GPRG GRRGGR +EE KW P
Sbjct: 1 MAERGGEGGTERG--GDRGDFGRGFGGGRG--GGRGRDRGPRG-RGRRGGRASEETKWVP 55
Query: 221 VTKLGRLVKDGKIQKLEQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRT 400
VTKLGRLV D KI KLEQIYLHSLPVKEYQIID LVGPTLKDEVMKIMPVQKQTRAGQRT
Sbjct: 56 VTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRT 115
Query: 401 RFKAFVVVGDTNGHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPC 580
RFKAFVVVGD NGHVGLGVKCSKEVATAIRG IILAKLSV+PVRRGYWGNKIGKPHTVPC
Sbjct: 116 RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPC 175
Query: 581 KVTGE 595
KVTG+
Sbjct: 176 KVTGK 180
>gi|343455555|gb|AEM36341.1| At1g58380 [Arabidopsis thaliana]
Length = 284
Score = 301 bits (769), Expect = 2e-079
Identities = 158/185 (85%), Positives = 163/185 (88%), Gaps = 11/185 (5%)
Frame = +2
Query: 59 MAERGGE---QRGAVGERGGFGRGFGGGRGDRGGRG---GPRGCGGRRGGRPAEEDKWTP 220
MAERGGE +RG G+RG FGRGFGGGRG GGRG GPRG GRRGGR +EE KW P
Sbjct: 1 MAERGGESGAERG--GDRGDFGRGFGGGRG--GGRGRDRGPRG-RGRRGGRASEETKWVP 55
Query: 221 VTKLGRLVKDGKIQKLEQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRT 400
VTKLGRLV D KI KLEQIYLHSLPVKEYQIID LVGPTLKDEVMKIMPVQKQTRAGQRT
Sbjct: 56 VTKLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRT 115
Query: 401 RFKAFVVVGDTNGHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPC 580
RFKAFVVVGD NGHVGLGVKCSKEVATAIRG IILAKLSV+PVRRGYWGNKIGKPHTVPC
Sbjct: 116 RFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPC 175
Query: 581 KVTGE 595
KVTG+
Sbjct: 176 KVTGK 180
>gi|21553851|gb|AAM62944.1| 40S ribosomal protein S2 [Arabidopsis thaliana]
Length = 285
Score = 300 bits (768), Expect = 3e-079
Identities = 154/184 (83%), Positives = 164/184 (89%), Gaps = 8/184 (4%)
Frame = +2
Query: 59 MAERGGE---QRGAVGERGGFGRGFG--GGRGDRGGRGGPRGCGGRRGGRPAEEDKWTPV 223
MAERGGE +RG GERG FGRGFG GGRGDRGGR G G GGRRGGR +EE+KW PV
Sbjct: 1 MAERGGERGVERG--GERGDFGRGFGGRGGRGDRGGR-GRGGRGGRRGGRASEEEKWVPV 57
Query: 224 TKLGRLVKDGKIQKLEQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRTR 403
TKLGR V G I+++EQIYLHSLPVKEYQIID+L+GPTLKDEVMKIMPVQKQTRAGQRTR
Sbjct: 58 TKLGRHVAAGHIKQIEQIYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTR 117
Query: 404 FKAFVVVGDTNGHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCK 583
FKAFVVVGD NGHVGLGVKCSKEVATAIRG IILAKLSV+PVRRGYWGNKIGKPHTVPCK
Sbjct: 118 FKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCK 177
Query: 584 VTGE 595
VTG+
Sbjct: 178 VTGK 181
>gi|6566279|dbj|BAA88264.1| RF12 [Arabidopsis thaliana]
Length = 282
Score = 297 bits (760), Expect = 2e-078
Identities = 156/183 (85%), Positives = 161/183 (87%), Gaps = 11/183 (6%)
Frame = +2
Query: 65 ERGGE---QRGAVGERGGFGRGFGGGRGDRGGRG---GPRGCGGRRGGRPAEEDKWTPVT 226
ERGGE +RG G+RG FGRGFGGGRG GGRG GPRG GRRGGR +EE KW PVT
Sbjct: 1 ERGGESGAERG--GDRGDFGRGFGGGRG--GGRGRDRGPRG-RGRRGGRASEETKWVPVT 55
Query: 227 KLGRLVKDGKIQKLEQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRTRF 406
KLGRLV D KI KLEQIYLHSLPVKEYQIID LVGPTLKDEVMKIMPVQKQTRAGQRTRF
Sbjct: 56 KLGRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRF 115
Query: 407 KAFVVVGDTNGHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKV 586
KAFVVVGD NGHVGLGVKCSKEVATAIRG IILAKLSV+PVRRGYWGNKIGKPHTVPCKV
Sbjct: 116 KAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKV 175
Query: 587 TGE 595
TG+
Sbjct: 176 TGK 178
>gi|297837605|ref|XP_002886684.1| hypothetical protein ARALYDRAFT_475376
[Arabidopsis lyrata subsp. lyrata]
Length = 282
Score = 297 bits (760), Expect = 2e-078
Identities = 156/181 (86%), Positives = 162/181 (89%), Gaps = 7/181 (3%)
Frame = +2
Query: 62 AERGGEQRGAV--GERGGFGRGFGGGRGDRGGRG-GPRGCGGRRGGRPAEEDKWTPVTKL 232
AERGGE RGA G+RG FGRGFGGGRG GGR GPRG GRRGGR +EE KW PVTKL
Sbjct: 2 AERGGE-RGAERGGDRGNFGRGFGGGRG--GGRDRGPRG-RGRRGGRASEEAKWVPVTKL 57
Query: 233 GRLVKDGKIQKLEQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRTRFKA 412
GRLV D KI KLE+IYLHSLPVKEYQIIDLLVGP+LKDEVMKIMPVQKQTRAGQRTRFKA
Sbjct: 58 GRLVLDNKITKLEEIYLHSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKA 117
Query: 413 FVVVGDTNGHVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTG 592
FVVVGD NGHVGLGVKCSKEVATAIRG IILAKLSV+PVRRGYWGNKIGKPHTVPCKVTG
Sbjct: 118 FVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTG 177
Query: 593 E 595
+
Sbjct: 178 K 178
>gi|297820548|ref|XP_002878157.1| 40S ribosomal protein S2 [Arabidopsis lyrata
subsp. lyrata]
Length = 272
Score = 293 bits (749), Expect = 4e-077
Identities = 146/167 (87%), Positives = 156/167 (93%), Gaps = 4/167 (2%)
Frame = +2
Query: 95 GERGGFGRGFGGGRGDRGGRGGPRGCGGRRGGRPAEEDKWTPVTKLGRLVKDGKIQKLEQ 274
G+RG FGRGF GGRG GGRGGPRG GRR GR EE+KW PVTKLGRLVK+GKI++LEQ
Sbjct: 6 GDRGDFGRGF-GGRG--GGRGGPRG-RGRRAGRDPEEEKWVPVTKLGRLVKEGKIKQLEQ 61
Query: 275 IYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTNGHVGLG 454
IYLHSLPVKEYQIIDLLVGP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD+NGHVGLG
Sbjct: 62 IYLHSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDSNGHVGLG 121
Query: 455 VKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGE 595
VKCSKEVATAIRG IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTG+
Sbjct: 122 VKCSKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGK 168
>gi|15230312|ref|NP_191308.1| 40S ribosomal protein S2-4 [Arabidopsis thaliana]
Length = 276
Score = 293 bits (748), Expect = 5e-077
Identities = 145/167 (86%), Positives = 155/167 (92%), Gaps = 4/167 (2%)
Frame = +2
Query: 95 GERGGFGRGFGGGRGDRGGRGGPRGCGGRRGGRPAEEDKWTPVTKLGRLVKDGKIQKLEQ 274
G+RG FGRGF GGRG GGRGGPRG GRR GR EE+KW PVTKLGRLVK+GKI K+EQ
Sbjct: 10 GDRGDFGRGF-GGRG--GGRGGPRG-RGRRAGRAPEEEKWVPVTKLGRLVKEGKITKIEQ 65
Query: 275 IYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTNGHVGLG 454
IYLHSLPVKEYQIIDLLVGP+LKDEVMKIMPVQKQTRAGQRTRFKAF+VVGD+NGHVGLG
Sbjct: 66 IYLHSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLG 125
Query: 455 VKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGE 595
VKCSKEVATAIRG IILAKLSV+P+RRGYWGNKIGKPHTVPCKVTG+
Sbjct: 126 VKCSKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGK 172
>gi|224138034|ref|XP_002322713.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 286 bits (730), Expect = 6e-075
Identities = 142/169 (84%), Positives = 149/169 (88%), Gaps = 4/169 (2%)
Frame = +2
Query: 98 ERGGFGRGFGGGRGDRGGRGGPRGCGG---RRGGRPAEEDKWTPVTKLGRLVKDGKIQKL 268
ERG FGRGF GGRGDRGGRGG GG RR GR EE+KW PVTKLGRLVKDGKI +
Sbjct: 8 ERGSFGRGF-GGRGDRGGRGGRGDRGGRGRRRSGRKEEEEKWVPVTKLGRLVKDGKISSV 66
Query: 269 EQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTNGHVG 448
EQIYLHSLP+KEYQIID L+GP LKDEVMKI PVQKQTRAGQRTRFKAFVVVGD NGHVG
Sbjct: 67 EQIYLHSLPIKEYQIIDTLIGPILKDEVMKITPVQKQTRAGQRTRFKAFVVVGDGNGHVG 126
Query: 449 LGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGE 595
LGVKC+KEVATAIRG IILAKLS+IPVRRGYWGNKIGKPHTVPCKVTG+
Sbjct: 127 LGVKCAKEVATAIRGAIILAKLSIIPVRRGYWGNKIGKPHTVPCKVTGK 175
>gi|225441799|ref|XP_002283793.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 273
Score = 285 bits (729), Expect = 8e-075
Identities = 145/171 (84%), Positives = 153/171 (89%), Gaps = 6/171 (3%)
Frame = +2
Query: 86 GAVGERGGFGRGFG-GGRGDRGGRGGPRGCGGRRGGRPAEEDKWTPVTKLGRLVKDGKIQ 262
G GERGGFGRGFG GGRGDR GRGG R R GR EE+KW PVTKLGRLVKDGKI+
Sbjct: 5 GGGGERGGFGRGFGRGGRGDR-GRGGRR----RSAGRREEEEKWVPVTKLGRLVKDGKIR 59
Query: 263 KLEQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTNGH 442
+E+IYLHSLP+KE+QIID LVGP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NGH
Sbjct: 60 TVEEIYLHSLPIKEHQIIDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGH 119
Query: 443 VGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGE 595
VGLGVKCSKEVATAIRG IILAKLSVIPVRRGYWGNKIGKPHTVPCKVTG+
Sbjct: 120 VGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGK 170
>gi|224090212|ref|XP_002308954.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 285 bits (728), Expect = 1e-074
Identities = 141/168 (83%), Positives = 148/168 (88%), Gaps = 8/168 (4%)
Frame = +2
Query: 98 ERGGFGRGFG--GGRGDRGGRGGPRGCGGRRGGRPAEEDKWTPVTKLGRLVKDGKIQKLE 271
ERG FGRGFG GGRGDRGGR G RRGGR EE+KW PVTKLGRLVKDGKI +E
Sbjct: 8 ERGSFGRGFGGRGGRGDRGGR------GRRRGGRKEEEEKWVPVTKLGRLVKDGKISSVE 61
Query: 272 QIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTNGHVGL 451
QIYLHSLP+KEYQIID L+GP LKDEVMKI PVQKQTRAGQRTRFKAFVVVGD NGHVGL
Sbjct: 62 QIYLHSLPIKEYQIIDTLIGPALKDEVMKITPVQKQTRAGQRTRFKAFVVVGDCNGHVGL 121
Query: 452 GVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGE 595
GVKC+KEVATAIRG IILAKLS+IPVRRGYWGNKIGKPHTVPCKVTG+
Sbjct: 122 GVKCAKEVATAIRGAIILAKLSIIPVRRGYWGNKIGKPHTVPCKVTGK 169
>gi|168002136|ref|XP_001753770.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 280
Score = 282 bits (721), Expect = 7e-074
Identities = 143/172 (83%), Positives = 151/172 (87%), Gaps = 6/172 (3%)
Frame = +2
Query: 95 GERGGFGRGFG-GGRGDRGGRGGPRGCGGRRGGRPA----EEDKWTPVTKLGRLVKDGKI 259
GERGGFGRGFG G RGDRGGR G RG G RRGGR EE+KW PVTKLGRLVKDGKI
Sbjct: 6 GERGGFGRGFGRGDRGDRGGR-GDRGRGDRRGGRRGAKRDEEEKWVPVTKLGRLVKDGKI 64
Query: 260 QKLEQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTNG 439
+ LEQIYL SLP+KE+QI++ +G LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NG
Sbjct: 65 KSLEQIYLFSLPIKEHQIVEFFLGSALKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDNNG 124
Query: 440 HVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGE 595
HVGLGVKCSKEVATAIRG IILAKLSVIPVRRGYWGNKIGKPHTVPCKVTG+
Sbjct: 125 HVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGK 176
>gi|168056372|ref|XP_001780194.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 280
Score = 281 bits (718), Expect = 2e-073
Identities = 142/171 (83%), Positives = 151/171 (88%), Gaps = 4/171 (2%)
Frame = +2
Query: 95 GERGGFGRGFG-GGRGDRGGRGGP-RG--CGGRRGGRPAEEDKWTPVTKLGRLVKDGKIQ 262
GERGGFGRGFG G RGDRGGRG RG GGRRG + EE+KW PVTKLGRLVKDGKI+
Sbjct: 6 GERGGFGRGFGRGDRGDRGGRGDTGRGDRRGGRRGAKRDEEEKWVPVTKLGRLVKDGKIK 65
Query: 263 KLEQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTNGH 442
LEQIYL SLP+KE+QI++ +G LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NGH
Sbjct: 66 SLEQIYLFSLPIKEHQIVEFFLGSALKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDNNGH 125
Query: 443 VGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGE 595
VGLGVKCSKEVATAIRG IILAKLSVIPVRRGYWGNKIGKPHTVPCKVTG+
Sbjct: 126 VGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGK 176
>gi|307136141|gb|ADN33986.1| 40S ribosomal protein s2 [Cucumis melo subsp.
melo]
Length = 269
Score = 281 bits (718), Expect = 2e-073
Identities = 140/166 (84%), Positives = 149/166 (89%), Gaps = 5/166 (3%)
Frame = +2
Query: 101 RGGFGRGFGGGRGDRGGRGGPRGCGG-RRGGRPAEEDKWTPVTKLGRLVKDGKIQKLEQI 277
RGGFGRGFGG RG GG RG GG RR GR EE+KW PVTKLGRLVK+G+IQ LEQI
Sbjct: 4 RGGFGRGFGG----RGRGGGDRGRGGRRRAGRRDEEEKWVPVTKLGRLVKEGRIQSLEQI 59
Query: 278 YLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTNGHVGLGV 457
YLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NGHVGLGV
Sbjct: 60 YLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGV 119
Query: 458 KCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGE 595
KCSKEVATAIRG IILAKLSVIPVRRGYWGNKIGKPHTVPCKVTG+
Sbjct: 120 KCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGK 165
>gi|168065301|ref|XP_001784592.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 280
Score = 281 bits (717), Expect = 2e-073
Identities = 142/172 (82%), Positives = 151/172 (87%), Gaps = 6/172 (3%)
Frame = +2
Query: 95 GERGGFGRGFG-GGRGDRGGRGGPRGCGGRRGGRPA----EEDKWTPVTKLGRLVKDGKI 259
GERGGFGRGFG G RGDRGGR G RG G RRGGR EE+KW PVTKLGRLVK+GKI
Sbjct: 6 GERGGFGRGFGRGDRGDRGGR-GDRGRGDRRGGRRGPKRDEEEKWVPVTKLGRLVKEGKI 64
Query: 260 QKLEQIYLHSLPVKEYQIIDLLVGPTLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTNG 439
+ LEQIYL SLP+KE+QI++ +G LKDEVMKIMPVQKQTRAGQRTRFKAFVVVGD NG
Sbjct: 65 KSLEQIYLFSLPIKEHQIVEFFLGSALKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDNNG 124
Query: 440 HVGLGVKCSKEVATAIRGGIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGE 595
HVGLGVKCSKEVATAIRG IILAKLSVIPVRRGYWGNKIGKPHTVPCKVTG+
Sbjct: 125 HVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGK 176
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,904,678,803,954
Number of Sequences: 15229318
Number of Extensions: 1904678803954
Number of Successful Extensions: 522425188
Number of sequences better than 0.0: 0
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