BLASTX 7.6.2
Query= UN16384 /QuerySize=641
(640 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G10300.1 | Symbols: | FUNCTIONS IN: molecular... 235 3e-062
TAIR9_protein||AT3G04300.1 | Symbols: | FUNCTIONS IN: molecular... 126 2e-029
TAIR9_protein||AT4G10280.1 | Symbols: | FUNCTIONS IN: molecular... 95 3e-020
TAIR9_protein||AT4G28703.1 | Symbols: | FUNCTIONS IN: molecular... 74 5e-014
TAIR9_protein||AT4G10290.1 | Symbols: | FUNCTIONS IN: molecular... 74 5e-014
>TAIR9_protein||AT4G10300.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Cupin,
RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861,
cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold
(InterPro:IPR014710); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G04300.1); Has 356 Blast hits to 356 proteins
in 93 species: Archae - 0; Bacteria - 181; Metazoa - 0; Fungi - 0;
Plants - 80; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). |
chr4:6384564-6385946 FORWARD
Length = 135
Score = 235 bits (597), Expect = 3e-062
Identities = 118/140 (84%), Positives = 124/140 (88%), Gaps = 7/140 (5%)
Frame = +3
Query: 54 MGCIGLIDSASINIYRPVLTRTSNKPY-TRRGLSM-AAIRAESMATEKLGIFIEKNPPES 227
MGCIG+++ SIN P LTR SNKPY +RR SM AAIRAES TEKLGI IEKNPPES
Sbjct: 1 MGCIGVVNVTSIN---PYLTRRSNKPYNSRRPSSMAAAIRAES--TEKLGITIEKNPPES 55
Query: 228 KLTQLGVRSWPKWGCPPSKFPWTYDAKETCFLLEGKVKVYPNGSDEGVEIEAGDFVVFPK 407
KLTQLGVRSWPKWGCPPSKFPWTY AKETC+LL+GKVKVYPNGSDEGVEIEAGDFVVFPK
Sbjct: 56 KLTQLGVRSWPKWGCPPSKFPWTYSAKETCYLLQGKVKVYPNGSDEGVEIEAGDFVVFPK 115
Query: 408 GMSCTWDVSVAVDKHYQFE* 467
GMSCTWDVSVAVDKHYQFE*
Sbjct: 116 GMSCTWDVSVAVDKHYQFE* 135
>TAIR9_protein||AT3G04300.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cupin,
RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861,
cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold
(InterPro:IPR014710); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G10300.1); Has 364 Blast hits to 364 proteins
in 91 species: Archae - 0; Bacteria - 191; Metazoa - 0; Fungi - 0;
Plants - 78; Viruses - 0; Other Eukaryotes - 95 (source: NCBI BLink). |
chr3:1140318-1140723 FORWARD
Length = 97
Score = 126 bits (314), Expect = 2e-029
Identities = 52/91 (57%), Positives = 67/91 (73%)
Frame = +3
Query: 192 LGIFIEKNPPESKLTQLGVRSWPKWGCPPSKFPWTYDAKETCFLLEGKVKVYPNGSDEGV 371
+ I IE NP +L+ LGV SWPKW C P K+ ++ +ETC+L++GKVKVYP GS E V
Sbjct: 1 MNIVIENNPSSRRLSDLGVMSWPKWSCQPGKYALVFEERETCYLVKGKVKVYPKGSSEFV 60
Query: 372 EIEAGDFVVFPKGMSCTWDVSVAVDKHYQFE 464
E AGD V PKG+SCTWDVS+ +DKHY+F+
Sbjct: 61 EFGAGDLVTIPKGLSCTWDVSLFIDKHYKFD 91
>TAIR9_protein||AT4G10280.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Cupin, RmlC-type (InterPro:IPR011051), Protein of unknown
function DUF861, cupin-3 (InterPro:IPR008579), RmlC-like jelly roll
fold (InterPro:IPR014710); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G10290.1); Has 293 Blast hits to 293 proteins
in 74 species: Archae - 0; Bacteria - 124; Metazoa - 0; Fungi - 0;
Plants - 79; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). |
chr4:6375220-6375996 REVERSE
Length = 141
Score = 95 bits (235), Expect = 3e-020
Identities = 48/97 (49%), Positives = 59/97 (60%), Gaps = 3/97 (3%)
Frame = +3
Query: 183 TEKLGIFIEKNPPESKLTQLGVRSWPKWGCPPSKFPWTYDAKETCFLLEGKVKVYPNGSD 362
TE G+ I + ++KL QLGV SWPKW PSKFPW + ET + +EGKVKV +G D
Sbjct: 43 TEIHGVKILRQASDTKLAQLGVASWPKWEGAPSKFPWEFKKTETIYFMEGKVKVNVDGYD 102
Query: 363 ---EGVEIEAGDFVVFPKGMSCTWDVSVAVDKHYQFE 464
E EI GD VVFPK M W+++ AV K Y E
Sbjct: 103 EEEETFEIGKGDVVVFPKDMKVVWEITEAVKKQYSLE 139
>TAIR9_protein||AT4G28703.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant
structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal
differentiation and expansion stage, D bilateral stage, E expanded
cotyledon stage; CONTAINS InterPro DOMAIN/s: Cupin, RmlC-type
(InterPro:IPR011051), Protein of unknown function DUF861, cupin-3
(InterPro:IPR008579), RmlC-like jelly roll fold (InterPro:IPR014710);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G04300.1); Has 311 Blast hits to 311 proteins in 80 species:
Archae - 0; Bacteria - 147; Metazoa - 0; Fungi - 0; Plants - 76;
Viruses - 0; Other Eukaryotes - 88 (source: NCBI BLink). |
chr4:14166365-14166798 FORWARD
Length = 108
Score = 74 bits (181), Expect = 5e-014
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Frame = +3
Query: 177 MATEKLGIFIEKNPPESKLTQLGVRSWPKWGCPPSKFPWTYDAKETCFLLEGKVKVYPN- 353
MA + I +E+NP +++L +L +SWPKWGC P K+ Y+A+E C++L GKVKVYP
Sbjct: 1 MADQNPRIIVEQNPSQARLDELKFKSWPKWGCSPGKYHLKYEAEEICYILRGKVKVYPKP 60
Query: 354 --GSDEGVEIE 380
S E+E
Sbjct: 61 PPSSSSDAEVE 71
Score = 55 bits (131), Expect = 3e-008
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 369 VEIEAGDFVVFPKGMSCTWDVSVAVDKHYQF 461
VE AGD V FPKG+SCTWDVS++VDKHY F
Sbjct: 74 VEFGAGDIVTFPKGLSCTWDVSLSVDKHYIF 104
>TAIR9_protein||AT4G10290.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cupin,
RmlC-type (InterPro:IPR011051), Protein of unknown function DUF861,
cupin-3 (InterPro:IPR008579), RmlC-like jelly roll fold
(InterPro:IPR014710); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G10280.1); Has 242 Blast hits to 242 proteins
in 52 species: Archae - 0; Bacteria - 84; Metazoa - 0; Fungi - 0;
Plants - 81; Viruses - 0; Other Eukaryotes - 77 (source: NCBI BLink). |
chr4:6379958-6381720 REVERSE
Length = 121
Score = 74 bits (181), Expect = 5e-014
Identities = 42/109 (38%), Positives = 59/109 (54%), Gaps = 3/109 (2%)
Frame = +3
Query: 147 LSMAAIRAESMATEKLGIFIEKNPPESKLTQLGVRSWPKWGCPPSKFPWTYDAKETCFLL 326
L+ +I A + TE G+ + + ++KL +LGV SW W P KFPW + ET + +
Sbjct: 3 LNHDSIFAPEVPTEIHGVKVMRQTSDAKLAELGVTSWQLWESMPRKFPWKFKKTETMYFV 62
Query: 327 EGKVKVY---PNGSDEGVEIEAGDFVVFPKGMSCTWDVSVAVDKHYQFE 464
EGK+KV + E +E AGD VVFP+ M+ DV V K Y E
Sbjct: 63 EGKLKVKVEDHHKEGEALEFVAGDLVVFPQDMNVFVDVIEDVKKRYYRE 111
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,599,552,957
Number of Sequences: 33410
Number of Extensions: 8599552957
Number of Successful Extensions: 306342874
Number of sequences better than 0.0: 0
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