BLASTX 7.6.2
Query= UN16551 /QuerySize=1478
(1477 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G34900.1 | Symbols: GTE01, IMB1, GTE1 | IMB1 (... 610 8e-175
TAIR9_protein||AT2G34900.2 | Symbols: IMB1 | IMB1 (IMBIBITION-IN... 452 3e-127
TAIR9_protein||AT3G52280.1 | Symbols: GTE6 | GTE6 (GENERAL TRANS... 278 6e-075
TAIR9_protein||AT5G10550.1 | Symbols: GTE2 | GTE2 (Global transc... 107 2e-023
TAIR9_protein||AT1G06230.1 | Symbols: GTE4 | GTE4 (GLOBAL TRANSC... 105 9e-023
TAIR9_protein||AT1G06230.2 | Symbols: GTE4 | GTE4 (GLOBAL TRANSC... 105 9e-023
TAIR9_protein||AT1G17790.1 | Symbols: | DNA-binding bromodomain... 104 2e-022
TAIR9_protein||AT1G73150.1 | Symbols: GTE3 | GTE3 (GLOBAL TRANSC... 99 5e-021
TAIR9_protein||AT5G63320.1 | Symbols: | FUNCTIONS IN: molecular... 99 5e-021
TAIR9_protein||AT5G14270.1 | Symbols: ATBET9 | ATBET9 (Arabidops... 99 5e-021
TAIR9_protein||AT5G63320.2 | Symbols: | FUNCTIONS IN: molecular... 99 5e-021
TAIR9_protein||AT5G63320.3 | Symbols: | FUNCTIONS IN: molecular... 99 5e-021
TAIR9_protein||AT5G65630.1 | Symbols: GTE7 | GTE7 (Global transc... 97 2e-020
TAIR9_protein||AT3G01770.1 | Symbols: ATBET10 | ATBET10 (Arabido... 93 3e-019
TAIR9_protein||AT3G27260.1 | Symbols: GTE8 | GTE8; DNA binding |... 91 2e-018
TAIR9_protein||AT5G46550.1 | Symbols: | DNA-binding bromodomain... 88 1e-017
>TAIR9_protein||AT2G34900.1 | Symbols: GTE01, IMB1, GTE1 | IMB1
(IMBIBITION-INDUCIBLE 1); DNA binding | chr2:14723333-14725562 REVERSE
Length = 387
Score = 610 bits (1572), Expect = 8e-175
Identities = 315/378 (83%), Positives = 343/378 (90%), Gaps = 5/378 (1%)
Frame = +1
Query: 103 MSVNVKEEPVLAPNCDVIENTEVEVVNGDEGSKLEDYGTCVDVITERVNQLEQKVVEVEQ 282
MSV+VKEEPVL PNCDV ENTE+ V NG+ S+LE++GTCVD IT+RVNQLEQKVVEVE
Sbjct: 1 MSVHVKEEPVLVPNCDV-ENTELAVFNGNGESELENFGTCVDEITDRVNQLEQKVVEVEH 59
Query: 283 FYSTKDGAGQTNTSKSNSGGKKVAISQP--SKCSSAGKGITRGKHVSSPELMRQFATIFR 456
FYSTKDGA QTNTSKSNSGGKK+AISQP SK +SAGK ++GKHVSSP+LMRQFAT+FR
Sbjct: 60 FYSTKDGAAQTNTSKSNSGGKKIAISQPNNSKGNSAGKEKSKGKHVSSPDLMRQFATMFR 119
Query: 457 QIAQQKWAWPFLQPVDVKGLGLDDYHKVIEKPMDLGTIRTKMEASEYSNVREIYADVRLV 636
QIAQ KWAWPFL+PVDVKGLGL DY+KVIEKPMDLGTI+ KME+SEYSNVREIYADVRLV
Sbjct: 120 QIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREIYADVRLV 179
Query: 637 FKNAMRYNEEKDDVYVMAESLLEKFEEKWLTIMPRLVEEEKKQAEEEAQDRASRQLAVEA 816
FKNAMRYNEEK+DVYVMAESLLEKFEEKWL IMP+LVEEEKKQ +EEA+ A++QL +EA
Sbjct: 180 FKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDEEAEKHANKQLTMEA 239
Query: 817 AQAEKARDLSNELYEIDQELEKLREVVVQKCRKLSTQEKKGLSAALGRLSPEDLSKALKM 996
AQAE ARDLSNELYEID +LEKLRE VVQ+CRKLSTQEKKGLSAALGRLSPEDLSKALKM
Sbjct: 240 AQAEMARDLSNELYEIDLQLEKLRESVVQRCRKLSTQEKKGLSAALGRLSPEDLSKALKM 299
Query: 997 VSEGNPQFPAGAPEVELDIDLQTDVTLWRLKVFVQEALKAANKSSGGTNAQNNNN--GGE 1170
VSE NP FPAGAPEVELDID+QTDVTLWRLKVFVQEALKAANKSSGGTNAQNNNN GE
Sbjct: 300 VSESNPSFPAGAPEVELDIDVQTDVTLWRLKVFVQEALKAANKSSGGTNAQNNNNTGTGE 359
Query: 1171 MNKTTAKRRRAIFDAIKK 1224
+NK AKRRR I DAI K
Sbjct: 360 INKNNAKRRREISDAINK 377
>TAIR9_protein||AT2G34900.2 | Symbols: IMB1 | IMB1 (IMBIBITION-INDUCIBLE 1); DNA
binding | chr2:14723333-14724800 REVERSE
Length = 277
Score = 452 bits (1162), Expect = 3e-127
Identities = 230/267 (86%), Positives = 246/267 (92%), Gaps = 2/267 (0%)
Frame = +1
Query: 430 MRQFATIFRQIAQQKWAWPFLQPVDVKGLGLDDYHKVIEKPMDLGTIRTKMEASEYSNVR 609
MRQFAT+FRQIAQ KWAWPFL+PVDVKGLGL DY+KVIEKPMDLGTI+ KME+SEYSNVR
Sbjct: 1 MRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVR 60
Query: 610 EIYADVRLVFKNAMRYNEEKDDVYVMAESLLEKFEEKWLTIMPRLVEEEKKQAEEEAQDR 789
EIYADVRLVFKNAMRYNEEK+DVYVMAESLLEKFEEKWL IMP+LVEEEKKQ +EEA+
Sbjct: 61 EIYADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEKWLLIMPKLVEEEKKQVDEEAEKH 120
Query: 790 ASRQLAVEAAQAEKARDLSNELYEIDQELEKLREVVVQKCRKLSTQEKKGLSAALGRLSP 969
A++QL +EAAQAE ARDLSNELYEID +LEKLRE VVQ+CRKLSTQEKKGLSAALGRLSP
Sbjct: 121 ANKQLTMEAAQAEMARDLSNELYEIDLQLEKLRESVVQRCRKLSTQEKKGLSAALGRLSP 180
Query: 970 EDLSKALKMVSEGNPQFPAGAPEVELDIDLQTDVTLWRLKVFVQEALKAANKSSGGTNAQ 1149
EDLSKALKMVSE NP FPAGAPEVELDID+QTDVTLWRLKVFVQEALKAANKSSGGTNAQ
Sbjct: 181 EDLSKALKMVSESNPSFPAGAPEVELDIDVQTDVTLWRLKVFVQEALKAANKSSGGTNAQ 240
Query: 1150 NNNN--GGEMNKTTAKRRRAIFDAIKK 1224
NNNN GE+NK AKRRR I DAI K
Sbjct: 241 NNNNTGTGEINKNNAKRRREISDAINK 267
>TAIR9_protein||AT3G52280.1 | Symbols: GTE6 | GTE6 (GENERAL TRANSCRIPTION FACTOR
GROUP E6); DNA binding / H3/H4 histone acetyltransferase |
chr3:19389103-19391289 REVERSE
Length = 370
Score = 278 bits (711), Expect = 6e-075
Identities = 148/330 (44%), Positives = 207/330 (62%), Gaps = 5/330 (1%)
Frame = +1
Query: 223 VDVITERVNQLEQKVVEVEQFYSTKDGAGQTNTSKSNSGGKKVAISQPSKCSSAGKGITR 402
VD + + V+ LE K+ EVE+FYS+ + + K G+ V + + +A +
Sbjct: 28 VDEVLQWVDSLEHKLKEVEEFYSSIGVSNSGSIGKDTEKGRHVVGIRKIQQEAARREAVA 87
Query: 403 GKHVSSPELMRQFATIFRQIAQQKWAWPFLQPVDVKGLGLDDYHKVIEKPMDLGTIRTKM 582
K + +LMRQF TIFRQI Q K AWPF+ PV+V+GLGL DY +VI+KPMD TI+ +M
Sbjct: 88 AKRMQ--DLMRQFGTIFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQM 145
Query: 583 EASE---YSNVREIYADVRLVFKNAMRYNEEKDDVYVMAESLLEKFEEKWLTIMPRLVEE 753
EA + Y +V +IYAD+RLVF+NAM YNEE DVY MA+ LLEKFEEKW +P++ EE
Sbjct: 146 EAKDGTGYKHVMQIYADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKWAHFLPKVQEE 205
Query: 754 EKKQAEEEAQDRASRQLAVEAAQAEKARDLSNELYEIDQELEKLREVVVQKCRKLSTQEK 933
EK + EEE Q LA EA+ + R+L NE+ + ELEKL VV++CRK++ +EK
Sbjct: 206 EKIREEEEKQAAKEALLAKEASHIKTTRELGNEICHANDELEKLMRKVVERCRKITIEEK 265
Query: 934 KGLSAALGRLSPEDLSKALKMVSEGNPQFPAGAPEVELDIDLQTDVTLWRLKVFVQEALK 1113
+ + AL +LSP+DL K L +V++ NP F A EV +++D+ + TLWRLK FV++AL
Sbjct: 266 RNIGLALLKLSPDDLQKVLGIVAQANPSFQPRAEEVSIEMDILDEPTLWRLKFFVKDALD 325
Query: 1114 AANKSSGGTNAQNNNNGGEMNKTTAKRRRA 1203
A K + G K +K+R A
Sbjct: 326 NAMKKKKEEETKTRELSGAQKKEVSKKRNA 355
>TAIR9_protein||AT5G10550.1 | Symbols: GTE2 | GTE2 (Global transcription factor
group E 2); DNA binding | chr5:3332855-3335232 REVERSE
Length = 679
Score = 107 bits (267), Expect = 2e-023
Identities = 61/159 (38%), Positives = 88/159 (55%), Gaps = 7/159 (4%)
Frame = +1
Query: 301 GAGQTNTSKSNSG-GKK----VAISQPSKCSSAGKGITRGKHVSSPELMRQFATIFRQIA 465
G +T T K G G+K A +PS + K + S +M I ++
Sbjct: 204 GVKKTKTKKKKIGHGQKRSNPFATDEPSLKRHVALDLMSEKVLKS--MMTTCGQILVKLM 261
Query: 466 QQKWAWPFLQPVDVKGLGLDDYHKVIEKPMDLGTIRTKMEASEYSNVREIYADVRLVFKN 645
+ KW+W FL PVDV GLGL DYH++++KPMDLGT++ +E Y + + +DVRL F N
Sbjct: 262 KHKWSWVFLNPVDVVGLGLHDYHRIVDKPMDLGTVKMNLEKGLYRSPIDFASDVRLTFTN 321
Query: 646 AMRYNEEKDDVYVMAESLLEKFEEKWLTIMPRLVEEEKK 762
AM YN + DVY+MAE LL +F+ + + R +E K
Sbjct: 322 AMSYNPKGQDVYLMAEKLLSQFDVWFNPTLKRFEAQEVK 360
>TAIR9_protein||AT1G06230.1 | Symbols: GTE4 | GTE4 (GLOBAL TRANSCRIPTION FACTOR
GROUP E 4); DNA binding | chr1:1907626-1910183 FORWARD
Length = 767
Score = 105 bits (261), Expect = 9e-023
Identities = 63/169 (37%), Positives = 89/169 (52%), Gaps = 9/169 (5%)
Frame = +1
Query: 235 TERVN---QLEQKVVEVEQFYSTKDGAGQTNTSKSNSGGKKVAISQPSKCSSAGKGITRG 405
T+ VN + E++ + QFY + + S KK S + G G G
Sbjct: 360 TQGVNEHVEKEKRTPKANQFYRNSEFLLGDKLPPAES-NKKSKSSSKKQGGDVGHGFGAG 418
Query: 406 KHVSSPELMRQFATIFRQIAQQKWAWPFLQPVDVKGLGLDDYHKVIEKPMDLGTIRTKME 585
V + + + ++ + K W F PVDVKGLGL DY+ +IE PMDLGTI++ +
Sbjct: 419 TKV-----FKNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALM 473
Query: 586 ASEYSNVREIYADVRLVFKNAMRYNEEKDDVYVMAESLLEKFEEKWLTI 732
+ Y + RE DVRL F NAM YN E DV++MA +LL+ FEE+W I
Sbjct: 474 KNLYKSPREFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVI 522
>TAIR9_protein||AT1G06230.2 | Symbols: GTE4 | GTE4 (GLOBAL TRANSCRIPTION FACTOR
GROUP E 4); DNA binding | chr1:1907626-1910183 FORWARD
Length = 767
Score = 105 bits (261), Expect = 9e-023
Identities = 63/169 (37%), Positives = 89/169 (52%), Gaps = 9/169 (5%)
Frame = +1
Query: 235 TERVN---QLEQKVVEVEQFYSTKDGAGQTNTSKSNSGGKKVAISQPSKCSSAGKGITRG 405
T+ VN + E++ + QFY + + S KK S + G G G
Sbjct: 360 TQGVNEHVEKEKRTPKANQFYRNSEFLLGDKLPPAES-NKKSKSSSKKQGGDVGHGFGAG 418
Query: 406 KHVSSPELMRQFATIFRQIAQQKWAWPFLQPVDVKGLGLDDYHKVIEKPMDLGTIRTKME 585
V + + + ++ + K W F PVDVKGLGL DY+ +IE PMDLGTI++ +
Sbjct: 419 TKV-----FKNCSALLERLMKHKHGWVFNAPVDVKGLGLLDYYTIIEHPMDLGTIKSALM 473
Query: 586 ASEYSNVREIYADVRLVFKNAMRYNEEKDDVYVMAESLLEKFEEKWLTI 732
+ Y + RE DVRL F NAM YN E DV++MA +LL+ FEE+W I
Sbjct: 474 KNLYKSPREFAEDVRLTFHNAMTYNPEGQDVHLMAVTLLQIFEERWAVI 522
>TAIR9_protein||AT1G17790.1 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:6125532-6127276 REVERSE
Length = 488
Score = 104 bits (258), Expect = 2e-022
Identities = 59/165 (35%), Positives = 87/165 (52%), Gaps = 9/165 (5%)
Frame = +1
Query: 250 QLEQKVVEVEQFYSTKDGAGQTNTSKSNSG----GKKVAISQPSKCSSAGKGITRGKHVS 417
+L+ ++ EV D S + SG KKV + GK G
Sbjct: 74 KLKSELDEVRSLIKRFDPEANPGGSMAKSGVVGRSKKVKTG-----NGGGKKSGHGADKG 128
Query: 418 SPELMRQFATIFRQIAQQKWAWPFLQPVDVKGLGLDDYHKVIEKPMDLGTIRTKMEASEY 597
+ ++ + ++ ++ + K AW F PVD KGLGL DYH ++++PMDLGT++TK+ S Y
Sbjct: 129 TVQIFKNCNSLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKTKLGKSLY 188
Query: 598 SNVREIYADVRLVFKNAMRYNEEKDDVYVMAESLLEKFEEKWLTI 732
+ + DVRL F NA+ YN DVY AE LL FE+KW++I
Sbjct: 189 KSPLDFAEDVRLTFNNAILYNPIGHDVYRFAELLLNMFEDKWVSI 233
>TAIR9_protein||AT1G73150.1 | Symbols: GTE3 | GTE3 (GLOBAL TRANSCRIPTION FACTOR
GROUP E 3); DNA binding / histone binding | chr1:27504327-27505996
REVERSE
Length = 462
Score = 99 bits (246), Expect = 5e-021
Identities = 54/136 (39%), Positives = 75/136 (55%), Gaps = 5/136 (3%)
Frame = +1
Query: 340 GKKVAISQPSKCSSAGKGITRGKHVSSP-----ELMRQFATIFRQIAQQKWAWPFLQPVD 504
G A K +A G G H ++ ++++ + ++ + K W F PVD
Sbjct: 85 GNNFAPVPNKKLKTANGGKKGGVHGAAADKGTVQILKSCNNLLTKLMKHKSGWIFNTPVD 144
Query: 505 VKGLGLDDYHKVIEKPMDLGTIRTKMEASEYSNVREIYADVRLVFKNAMRYNEEKDDVYV 684
V LGL DYH +I++PMDLGT++T++ S Y + E DVRL F NAM YN DVY
Sbjct: 145 VVTLGLHDYHNIIKEPMDLGTVKTRLSKSLYKSPLEFAEDVRLTFNNAMLYNPVGHDVYH 204
Query: 685 MAESLLEKFEEKWLTI 732
MAE LL FEEKW+ +
Sbjct: 205 MAEILLNLFEEKWVPL 220
>TAIR9_protein||AT5G63320.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein
match is: ATBET9 (Arabidopsis thaliana Bromodomain and Extraterminal
Domain protein 9); DNA binding (TAIR:AT5G14270.1); Has 44558 Blast hits
to 24285 proteins in 1236 species: Archae - 185; Bacteria - 3450;
Metazoa - 19774; Fungi - 4003; Plants - 1404; Viruses - 349; Other
Eukaryotes - 15393 (source: NCBI BLink). | chr5:25374413-25378783
REVERSE
Length = 1062
Score = 99 bits (246), Expect = 5e-021
Identities = 69/238 (28%), Positives = 116/238 (48%), Gaps = 17/238 (7%)
Frame = +1
Query: 427 LMRQFATIFRQIAQQKWAWPFLQPVDVKGLGLDDYHKVIEKPMDLGTIRTKMEASEYSNV 606
+M++ T+ ++ K WPF PVD L + DY VI+ PMDLGTIR+++ EYS+
Sbjct: 161 VMKECETLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSP 220
Query: 607 REIYADVRLVFKNAMRYNEEKDDVYVMAESLLEKFEEKWLTIMPRLVEEEKKQAEEEAQD 786
+ ADVRL F N++ YN + + MA+ + + FE W +I ++ + +
Sbjct: 221 LDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFESGWKSIEKKIPMSKPPVIPLTSSA 280
Query: 787 RASRQLAVEAAQAEKARDLSNELYEIDQELEKLREVVVQKCRKLSTQ-EKKGLSAALGRL 963
++ E A K N+ KLR V+ + + T EKK L L L
Sbjct: 281 SLESEIPFEVAPMRKKEAAMND--------NKLR---VEPAKLVMTDGEKKKLGQDLMAL 329
Query: 964 S---PEDLSKALKMVSEGNPQFPAGAPEVELDIDLQTDVTLWRLKVFVQEALKAANKS 1128
P+ ++ L+ S + Q +G E+E+DI+ +D L+ ++ + + L+ KS
Sbjct: 330 EEDFPQKIADLLREQSGSDGQ--SGEGEIEIDIEALSDEILFMVRKLLDDYLREKKKS 385
>TAIR9_protein||AT5G14270.1 | Symbols: ATBET9 | ATBET9 (Arabidopsis thaliana
Bromodomain and Extraterminal Domain protein 9); DNA binding |
chr5:4605173-4608517 FORWARD
Length = 689
Score = 99 bits (246), Expect = 5e-021
Identities = 50/137 (36%), Positives = 75/137 (54%)
Frame = +1
Query: 427 LMRQFATIFRQIAQQKWAWPFLQPVDVKGLGLDDYHKVIEKPMDLGTIRTKMEASEYSNV 606
LM+Q + +++ ++ W F PVDV L + DY VIE PMDLGT++ K+ + YS
Sbjct: 137 LMKQCEALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCP 196
Query: 607 REIYADVRLVFKNAMRYNEEKDDVYVMAESLLEKFEEKWLTIMPRLVEEEKKQAEEEAQD 786
E ADVRL F NAM YN +DVYVMA++L + FE +W T+ +L +
Sbjct: 197 SEFAADVRLTFSNAMTYNPPGNDVYVMADTLRKFFEVRWKTLEKKLSGTKVHTEPSNLDA 256
Query: 787 RASRQLAVEAAQAEKAR 837
+ + + A+K +
Sbjct: 257 HKEKHIVIPVPMAKKRK 273
>TAIR9_protein||AT5G63320.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein
match is: ATBET9 (Arabidopsis thaliana Bromodomain and Extraterminal
Domain protein 9); DNA binding (TAIR:AT5G14270.1). |
chr5:25377180-25378783 REVERSE
Length = 478
Score = 99 bits (246), Expect = 5e-021
Identities = 69/238 (28%), Positives = 116/238 (48%), Gaps = 17/238 (7%)
Frame = +1
Query: 427 LMRQFATIFRQIAQQKWAWPFLQPVDVKGLGLDDYHKVIEKPMDLGTIRTKMEASEYSNV 606
+M++ T+ ++ K WPF PVD L + DY VI+ PMDLGTIR+++ EYS+
Sbjct: 161 VMKECETLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSP 220
Query: 607 REIYADVRLVFKNAMRYNEEKDDVYVMAESLLEKFEEKWLTIMPRLVEEEKKQAEEEAQD 786
+ ADVRL F N++ YN + + MA+ + + FE W +I ++ + +
Sbjct: 221 LDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFESGWKSIEKKIPMSKPPVIPLTSSA 280
Query: 787 RASRQLAVEAAQAEKARDLSNELYEIDQELEKLREVVVQKCRKLSTQ-EKKGLSAALGRL 963
++ E A K N+ KLR V+ + + T EKK L L L
Sbjct: 281 SLESEIPFEVAPMRKKEAAMND--------NKLR---VEPAKLVMTDGEKKKLGQDLMAL 329
Query: 964 S---PEDLSKALKMVSEGNPQFPAGAPEVELDIDLQTDVTLWRLKVFVQEALKAANKS 1128
P+ ++ L+ S + Q +G E+E+DI+ +D L+ ++ + + L+ KS
Sbjct: 330 EEDFPQKIADLLREQSGSDGQ--SGEGEIEIDIEALSDEILFMVRKLLDDYLREKKKS 385
>TAIR9_protein||AT5G63320.3 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s:
Bromodomain (InterPro:IPR001487); BEST Arabidopsis thaliana protein
match is: ATBET9 (Arabidopsis thaliana Bromodomain and Extraterminal
Domain protein 9); DNA binding (TAIR:AT5G14270.1). |
chr5:25377180-25378783 REVERSE
Length = 478
Score = 99 bits (246), Expect = 5e-021
Identities = 69/238 (28%), Positives = 116/238 (48%), Gaps = 17/238 (7%)
Frame = +1
Query: 427 LMRQFATIFRQIAQQKWAWPFLQPVDVKGLGLDDYHKVIEKPMDLGTIRTKMEASEYSNV 606
+M++ T+ ++ K WPF PVD L + DY VI+ PMDLGTIR+++ EYS+
Sbjct: 161 VMKECETLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSP 220
Query: 607 REIYADVRLVFKNAMRYNEEKDDVYVMAESLLEKFEEKWLTIMPRLVEEEKKQAEEEAQD 786
+ ADVRL F N++ YN + + MA+ + + FE W +I ++ + +
Sbjct: 221 LDFAADVRLTFSNSIAYNPPGNQFHTMAQGISKYFESGWKSIEKKIPMSKPPVIPLTSSA 280
Query: 787 RASRQLAVEAAQAEKARDLSNELYEIDQELEKLREVVVQKCRKLSTQ-EKKGLSAALGRL 963
++ E A K N+ KLR V+ + + T EKK L L L
Sbjct: 281 SLESEIPFEVAPMRKKEAAMND--------NKLR---VEPAKLVMTDGEKKKLGQDLMAL 329
Query: 964 S---PEDLSKALKMVSEGNPQFPAGAPEVELDIDLQTDVTLWRLKVFVQEALKAANKS 1128
P+ ++ L+ S + Q +G E+E+DI+ +D L+ ++ + + L+ KS
Sbjct: 330 EEDFPQKIADLLREQSGSDGQ--SGEGEIEIDIEALSDEILFMVRKLLDDYLREKKKS 385
>TAIR9_protein||AT5G65630.1 | Symbols: GTE7 | GTE7 (Global transcription factor
group E 7); DNA binding | chr5:26226311-26228257 REVERSE
Length = 591
Score = 97 bits (240), Expect = 2e-020
Identities = 44/96 (45%), Positives = 63/96 (65%)
Frame = +1
Query: 427 LMRQFATIFRQIAQQKWAWPFLQPVDVKGLGLDDYHKVIEKPMDLGTIRTKMEASEYSNV 606
++ + I ++ + KWAW F PVDV GLGL DYH+V++KPMDLGT++ ++ Y +
Sbjct: 169 MLNTCSQILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLDKGFYVSP 228
Query: 607 REIYADVRLVFKNAMRYNEEKDDVYVMAESLLEKFE 714
+ DVRL F NAM YN + DVY MA+ LL+ F+
Sbjct: 229 IDFATDVRLTFDNAMTYNPKGQDVYFMADKLLDHFD 264
>TAIR9_protein||AT3G01770.1 | Symbols: ATBET10 | ATBET10 (Arabidopsis thaliana
BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 10); DNA binding |
chr3:275582-278386 REVERSE
Length = 621
Score = 93 bits (230), Expect = 3e-019
Identities = 48/136 (35%), Positives = 77/136 (56%), Gaps = 2/136 (1%)
Frame = +1
Query: 430 MRQFATIFRQIAQQKWAWPFLQPVDVKGLGLDDYHKVIEKPMDLGTIRTKMEASEYSNVR 609
M+Q ++ +++ Q+ W F PVDV L + DY +I+ PMDLGT+++K+ + YS+
Sbjct: 130 MKQCESLLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPS 189
Query: 610 EIYADVRLVFKNAMRYNEEKDDVYVMAESLLEKFEEKWLTIMPRLVEEEKKQAEEEAQDR 789
E ADVRL F+NAM YN ++VY A++L + FE +W TI + K
Sbjct: 190 EFSADVRLTFRNAMTYNPSDNNVYRFADTLSKFFEVRWKTIEKK--SSGTKSEPSNLATL 247
Query: 790 ASRQLAVEAAQAEKAR 837
A + +A+ A+K +
Sbjct: 248 AHKDIAIPEPVAKKRK 263
>TAIR9_protein||AT3G27260.1 | Symbols: GTE8 | GTE8; DNA binding |
chr3:10068411-10072403 FORWARD
Length = 814
Score = 91 bits (224), Expect = 2e-018
Identities = 45/106 (42%), Positives = 63/106 (59%)
Frame = +1
Query: 427 LMRQFATIFRQIAQQKWAWPFLQPVDVKGLGLDDYHKVIEKPMDLGTIRTKMEASEYSNV 606
LM+Q T+ R++ +W F PVDV L + DY I+ PMDLGT++ + + YS+
Sbjct: 176 LMKQCDTLLRKLWSHPHSWVFQAPVDVVKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSP 235
Query: 607 REIYADVRLVFKNAMRYNEEKDDVYVMAESLLEKFEEKWLTIMPRL 744
E ADVRL F NAM YN DV++M + L + FE +W TI +L
Sbjct: 236 HEFAADVRLTFTNAMTYNPPGHDVHIMGDILSKLFEARWKTIKKKL 281
>TAIR9_protein||AT5G46550.1 | Symbols: | DNA-binding bromodomain-containing
protein | chr5:18884439-18886503 REVERSE
Length = 495
Score = 88 bits (216), Expect = 1e-017
Identities = 42/104 (40%), Positives = 65/104 (62%)
Frame = +1
Query: 436 QFATIFRQIAQQKWAWPFLQPVDVKGLGLDDYHKVIEKPMDLGTIRTKMEASEYSNVREI 615
Q + R + + + W F +PVD + + DY VI+KPMDLGT+++K+ + YSN E
Sbjct: 72 QCLALLRFLMEHRGGWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKLLKNVYSNADEF 131
Query: 616 YADVRLVFKNAMRYNEEKDDVYVMAESLLEKFEEKWLTIMPRLV 747
ADVRL F NAM YN ++V+ +A+ + E FE +W ++M + V
Sbjct: 132 AADVRLTFANAMHYNPLWNEVHTIAKEINEIFEVRWESLMKKKV 175
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,775,572,671
Number of Sequences: 33410
Number of Extensions: 8775572671
Number of Successful Extensions: 306414901
Number of sequences better than 0.0: 0
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