BLASTX 7.6.2
Query= UN16640 /QuerySize=1178
(1177 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|22328520|ref|NP_192643.2| RNA recognition motif-containing pr... 410 3e-112
gi|51969402|dbj|BAD43393.1| putative protein [Arabidopsis thaliana] 409 7e-112
gi|297808953|ref|XP_002872360.1| hypothetical protein ARALYDRAFT... 401 1e-109
gi|145332989|ref|NP_001078360.1| RNA recognition motif-containin... 373 3e-101
gi|7267547|emb|CAB78028.1| putative protein [Arabidopsis thaliana] 289 6e-076
gi|255645618|gb|ACU23303.1| unknown [Glycine max] 269 7e-070
gi|224082053|ref|XP_002306558.1| predicted protein [Populus tric... 248 2e-063
gi|225459201|ref|XP_002285735.1| PREDICTED: hypothetical protein... 246 6e-063
gi|147769276|emb|CAN61580.1| hypothetical protein VITISV_008033 ... 244 2e-062
gi|255545842|ref|XP_002513981.1| ribonucleoprotein, chloroplast,... 236 8e-060
gi|51968436|dbj|BAD42910.1| putative protein [Arabidopsis thaliana] 181 3e-043
gi|115476954|ref|NP_001062073.1| Os08g0483200 [Oryza sativa Japo... 170 6e-040
gi|194696360|gb|ACF82264.1| unknown [Zea mays] 163 7e-038
gi|226492336|ref|NP_001150253.1| ribonucleoprotein [Zea mays] 163 7e-038
gi|242082447|ref|XP_002445992.1| hypothetical protein SORBIDRAFT... 163 9e-038
gi|7267548|emb|CAB78029.1| putative protein [Arabidopsis thaliana] 158 2e-036
gi|15226983|ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) fa... 144 3e-032
gi|297823333|ref|XP_002879549.1| hypothetical protein ARALYDRAFT... 139 8e-031
gi|255639879|gb|ACU20232.1| unknown [Glycine max] 130 6e-028
gi|238010966|gb|ACR36518.1| unknown [Zea mays] 97 5e-018
>gi|22328520|ref|NP_192643.2| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 304
Score = 410 bits (1052), Expect = 3e-112
Identities = 218/289 (75%), Positives = 240/289 (83%), Gaps = 18/289 (6%)
Frame = +1
Query: 22 PPISLQFLGHQSEHKTPNPGVSLTNFSLPWSTPPSLSRLHLSKPRNLTSCFSATTQEPIL 201
P ++ F H TP+ + + P S P +K RNLTS FS TTQEP+L
Sbjct: 23 PNPNVAFTNHSLSLSTPSLCRLHRHATFPDSIP--------AKSRNLTSYFSTTTQEPVL 74
Query: 202 ESSSSSS-------EEISKTRLIAQNVPWTSTPEDIRSLFEKHGNVVDVEMSMHKKERNR 360
ESSSSSS EEISKTRLIAQNVPWTSTPEDIRSLFEK+G+V+D+EMSMHKKERNR
Sbjct: 75 ESSSSSSSAPEVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNR 134
Query: 361 GLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPVPTFNLFVA 540
GLVFIEMASPE+AA+AL++LES EYEGRRLKV YAK KKKKTYAPRE P+PVPTFNLFVA
Sbjct: 135 GLVFIEMASPEEAATALKSLESCEYEGRRLKVDYAKTKKKKTYAPRETPSPVPTFNLFVA 194
Query: 541 NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALLEFQGK 720
NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKK A+AAL+EFQGK
Sbjct: 195 NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGK 254
Query: 721 DFMGRPIRLARSKQFVKLQAKEGLQPPD---EEELSESETMTQEDEIPA 858
DF+GRPIRLA+SKQFVKLQAKEGLQPP+ EEE S+SETMTQE E PA
Sbjct: 255 DFLGRPIRLAKSKQFVKLQAKEGLQPPEEEAEEEPSQSETMTQEHETPA 303
>gi|51969402|dbj|BAD43393.1| putative protein [Arabidopsis thaliana]
Length = 304
Score = 409 bits (1049), Expect = 7e-112
Identities = 217/289 (75%), Positives = 240/289 (83%), Gaps = 18/289 (6%)
Frame = +1
Query: 22 PPISLQFLGHQSEHKTPNPGVSLTNFSLPWSTPPSLSRLHLSKPRNLTSCFSATTQEPIL 201
P ++ F H TP+ + + P S P +K RNLTS FS TTQEP+L
Sbjct: 23 PNPNVAFTNHSLSLSTPSLCRLHRHATFPDSIP--------AKSRNLTSYFSTTTQEPVL 74
Query: 202 ESSSSSS-------EEISKTRLIAQNVPWTSTPEDIRSLFEKHGNVVDVEMSMHKKERNR 360
+SSSSSS EEISKTRLIAQNVPWTSTPEDIRSLFEK+G+V+D+EMSMHKKERNR
Sbjct: 75 DSSSSSSSAPEVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNR 134
Query: 361 GLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPVPTFNLFVA 540
GLVFIEMASPE+AA+AL++LES EYEGRRLKV YAK KKKKTYAPRE P+PVPTFNLFVA
Sbjct: 135 GLVFIEMASPEEAATALKSLESCEYEGRRLKVDYAKTKKKKTYAPRETPSPVPTFNLFVA 194
Query: 541 NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALLEFQGK 720
NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKK A+AAL+EFQGK
Sbjct: 195 NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGK 254
Query: 721 DFMGRPIRLARSKQFVKLQAKEGLQPPD---EEELSESETMTQEDEIPA 858
DF+GRPIRLA+SKQFVKLQAKEGLQPP+ EEE S+SETMTQE E PA
Sbjct: 255 DFLGRPIRLAKSKQFVKLQAKEGLQPPEEEAEEEPSQSETMTQEHETPA 303
>gi|297808953|ref|XP_002872360.1| hypothetical protein ARALYDRAFT_489706
[Arabidopsis lyrata subsp. lyrata]
Length = 300
Score = 401 bits (1030), Expect = 1e-109
Identities = 205/244 (84%), Positives = 224/244 (91%), Gaps = 6/244 (2%)
Frame = +1
Query: 145 SKPRNLTSCFSATTQEPILESSSSSS-----EEISKTRLIAQNVPWTSTPEDIRSLFEKH 309
+K RN T+ FS TTQ+P+LESSSSS+ EEISKTRLIAQNVPWTSTPEDIRSLFEK+
Sbjct: 56 AKSRNFTTYFSTTTQDPVLESSSSSATEVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKY 115
Query: 310 GNVVDVEMSMHKKERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKTY 489
GNV+D+EMSMHKKERNRGLVFIEMASP++AA+AL++LES +YEGRRLKV YAK KKKKTY
Sbjct: 116 GNVIDIEMSMHKKERNRGLVFIEMASPDEAATALKSLESCDYEGRRLKVDYAKTKKKKTY 175
Query: 490 APREKPTPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVS 669
APREKP+PVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIF ENPRRSSGYGFVS
Sbjct: 176 APREKPSPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFQENPRRSSGYGFVS 235
Query: 670 FKTKKMADAALLEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPP-DEEELSESETMTQED 846
FKTKK A+AAL+EFQGKDFMGRPIRLA+SKQFVKLQAKEGLQPP +EEE S SE MTQE
Sbjct: 236 FKTKKQAEAALIEFQGKDFMGRPIRLAKSKQFVKLQAKEGLQPPEEEEEPSPSEAMTQEV 295
Query: 847 EIPA 858
E PA
Sbjct: 296 ETPA 299
>gi|145332989|ref|NP_001078360.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 244
Score = 373 bits (957), Expect = 3e-101
Identities = 187/213 (87%), Positives = 202/213 (94%), Gaps = 3/213 (1%)
Frame = +1
Query: 229 ISKTRLIAQNVPWTSTPEDIRSLFEKHGNVVDVEMSMHKKERNRGLVFIEMASPEDAASA 408
ISKTRLIAQNVPWTSTPEDIRSLFEK+G+V+D+EMSMHKKERNRGLVFIEMASPE+AA+A
Sbjct: 31 ISKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNRGLVFIEMASPEEAATA 90
Query: 409 LQALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPVPTFNLFVANLAFEARAKHLKEFFD 588
L++LES EYEGRRLKV YAK KKKKTYAPRE P+PVPTFNLFVANLAFEARAKHLKEFFD
Sbjct: 91 LKSLESCEYEGRRLKVDYAKTKKKKTYAPRETPSPVPTFNLFVANLAFEARAKHLKEFFD 150
Query: 589 ADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALLEFQGKDFMGRPIRLARSKQFV 768
ADTGNVVSTEVIFHENPRRSSGYGFVSFKTKK A+AAL+EFQGKDF+GRPIRLA+SKQFV
Sbjct: 151 ADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGKDFLGRPIRLAKSKQFV 210
Query: 769 KLQAKEGLQPPD---EEELSESETMTQEDEIPA 858
KLQAKEGLQPP+ EEE S+SETMTQE E PA
Sbjct: 211 KLQAKEGLQPPEEEAEEEPSQSETMTQEHETPA 243
>gi|7267547|emb|CAB78028.1| putative protein [Arabidopsis thaliana]
Length = 225
Score = 289 bits (739), Expect = 6e-076
Identities = 146/169 (86%), Positives = 157/169 (92%), Gaps = 3/169 (1%)
Frame = +1
Query: 361 GLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPVPTFNLFVA 540
GLVFIEMASPE+A++A +LESYEYEGRRLKV YAK KKKKTYAPRE P+PVPTFNLFVA
Sbjct: 56 GLVFIEMASPEEASTAFISLESYEYEGRRLKVDYAKTKKKKTYAPRETPSPVPTFNLFVA 115
Query: 541 NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALLEFQGK 720
NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKK A+AAL+EFQGK
Sbjct: 116 NLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGK 175
Query: 721 DFMGRPIRLARSKQFVKLQAKEGLQPPD---EEELSESETMTQEDEIPA 858
DF+GRPIRLA+SKQFVKLQAKEGLQPP+ EEE S+SETMTQE E PA
Sbjct: 176 DFLGRPIRLAKSKQFVKLQAKEGLQPPEEEAEEEPSQSETMTQEHETPA 224
>gi|255645618|gb|ACU23303.1| unknown [Glycine max]
Length = 315
Score = 269 bits (687), Expect = 7e-070
Identities = 151/259 (58%), Positives = 179/259 (69%), Gaps = 12/259 (4%)
Frame = +1
Query: 94 NFSLPWSTPPSLSRLHLSKPRNLTSCFSATTQEPILESSSSSSEEISKTRLIAQNVPWTS 273
NFSL P LS + + NLT A+T E E S EE S+TRL+AQNVPWTS
Sbjct: 41 NFSLSSFHFPRLSLITTKQTLNLTPT-HASTSEQQTEEPLVSEEEFSRTRLLAQNVPWTS 99
Query: 274 TPEDIRSLFEKHGNVVDVEMSMHKKERNRGLVFIEMASPEDAASALQALESYEYEGRRLK 453
TPEDIR+LFEKHG V++VE+SM+KK RNRGL F+EM SPE+A AL LESYE+EGR +K
Sbjct: 100 TPEDIRTLFEKHGKVLEVELSMYKKNRNRGLAFVEMGSPEEALEALNNLESYEFEGRVIK 159
Query: 454 VAYAKAKKKKTYAPREKPTPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHE 633
V YA+ KK+KT P KP V TFNLFVANL++EA +K LKEFFD TG VVS EV++ +
Sbjct: 160 VNYARPKKEKTAPPPVKP-KVVTFNLFVANLSYEASSKDLKEFFDLGTGRVVSAEVVYRD 218
Query: 634 NPRRSSGYGFVSFKTKKMADAALLEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPPDEEE 813
NPRR SGYGFVSFK+KK A+AAL EFQGK FMGRPIR+ R ++FV+ QP D
Sbjct: 219 NPRRPSGYGFVSFKSKKEAEAALAEFQGKVFMGRPIRVDRGRRFVQ-------QPGDGSA 271
Query: 814 LSE---SETMTQEDEIPAP 861
SE SE E P P
Sbjct: 272 KSEDTPSELSVNGAEAPQP 290
>gi|224082053|ref|XP_002306558.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 248 bits (631), Expect = 2e-063
Identities = 127/207 (61%), Positives = 152/207 (73%), Gaps = 1/207 (0%)
Frame = +1
Query: 208 SSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKHGNVVDVEMSMHKKERNRGLVFIEMAS 387
+ EE SKTRL A NVPW T EDIR+LF+K G VVDVE+SM+ K RNRGL F+ M S
Sbjct: 94 AEEKEEEFSKTRLFASNVPWNCTAEDIRALFQKFGTVVDVELSMYSKIRNRGLAFVTMGS 153
Query: 388 PEDAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPVPTFNLFVANLAFEARAK 567
PE+A +AL LESYE+EGR LK+ YAKAKKKK +P P P PTFNLFVANL FEA++K
Sbjct: 154 PEEAVAALNNLESYEFEGRTLKMNYAKAKKKKP-SPPPPPKPGPTFNLFVANLPFEAKSK 212
Query: 568 HLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALLEFQGKDFMGRPIRL 747
LKEFF A+ NVVS E+IFH+NPRR SGYGFV+FKTKK AD A+ F K+FMGR +R+
Sbjct: 213 DLKEFFIAEGANVVSAEIIFHDNPRRPSGYGFVAFKTKKEADYAISTFSDKEFMGRQLRV 272
Query: 748 ARSKQFVKLQAKEGLQPPDEEELSESE 828
ARS+QFVK + ++ Q ESE
Sbjct: 273 ARSRQFVKQRKEDAAQSDGTSGELESE 299
>gi|225459201|ref|XP_002285735.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 294
Score = 246 bits (627), Expect = 6e-063
Identities = 136/255 (53%), Positives = 171/255 (67%), Gaps = 5/255 (1%)
Frame = +1
Query: 100 SLPWSTPPSLSRLHLSKPRNLTS--CFSATTQEPILESSSSSSEEISKTRLIAQNVPWTS 273
+LP T ++ H+S S S +T + + EE S+TRLIAQN+PWT
Sbjct: 41 ALPLRTTRRINLFHVSASAQTQSPPPASPSTAVTVDTPQNDEEEEFSRTRLIAQNIPWTC 100
Query: 274 TPEDIRSLFEKHGNVVDVEMSMHKKERNRGLVFIEMASPEDAASALQALESYEYEGRRLK 453
T +DIRSLFEK+G V+DVE+SMH K RNRGL FI M SPE+A +AL LESYE EGR +K
Sbjct: 101 TAQDIRSLFEKYGTVLDVELSMHNKTRNRGLAFISMGSPEEALAALSNLESYELEGRAIK 160
Query: 454 VAYAKAKKKKTYAPREKPTPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHE 633
V YA +KKK +P + PV +NLF+ANL ++ARAK L+EFF + NVVS EVIFHE
Sbjct: 161 VNYANPQKKKPSSPIQH-KPVTPYNLFIANLPYQARAKDLREFFSSGNCNVVSAEVIFHE 219
Query: 634 NPRRSSGYGFVSFKTKKMADAALLEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPPDEEE 813
NPRRSSGYGFVSF +K+ AD AL FQG+ FMGRP+R+ARS++FVK + K Q D
Sbjct: 220 NPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPLRVARSRRFVKRENKMSDQTEDVAN 279
Query: 814 --LSESETMTQEDEI 852
S SE + D+I
Sbjct: 280 PLNSNSEQSGEGDDI 294
>gi|147769276|emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis
vinifera]
Length = 294
Score = 244 bits (622), Expect = 2e-062
Identities = 130/228 (57%), Positives = 161/228 (70%), Gaps = 3/228 (1%)
Frame = +1
Query: 175 SATTQEPILESSSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKHGNVVDVEMSMHKKER 354
S +T + + EE S+TRLIAQN+PWT T +DIRSLFEK+G V+DVE+SMH K R
Sbjct: 68 SPSTAVTVDTPQNDEEEEFSRTRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKTR 127
Query: 355 NRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPVPTFNLF 534
NRGL FI M SPE+A +AL LESYE EGR +KV YA +KKK +P + PV +NLF
Sbjct: 128 NRGLAFISMGSPEEALAALSNLESYELEGRAIKVNYANPQKKKPSSPIQH-KPVTPYNLF 186
Query: 535 VANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALLEFQ 714
+ANL ++ARAK L+EFF + NVVS EVIFHENPRRSSGYGFVSF +K+ AD AL FQ
Sbjct: 187 IANLPYQARAKDLREFFSSGNCNVVSAEVIFHENPRRSSGYGFVSFGSKEEADTALSSFQ 246
Query: 715 GKDFMGRPIRLARSKQFVKLQAKEGLQPPDEEE--LSESETMTQEDEI 852
G+ FMGRP+R+ARS++FVK + K Q D S SE + D+I
Sbjct: 247 GQMFMGRPLRVARSRRFVKRENKMSDQTEDVANPLNSNSEQSGEGDDI 294
>gi|255545842|ref|XP_002513981.1| ribonucleoprotein, chloroplast, putative
[Ricinus communis]
Length = 305
Score = 236 bits (600), Expect = 8e-060
Identities = 118/203 (58%), Positives = 149/203 (73%), Gaps = 3/203 (1%)
Frame = +1
Query: 202 ESSSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKHGNVVDVEMSMHKKERNRGLVFIEM 381
+ EE S TR++A NVPW T EDIR+LFEK G VVDVE+SM+ K RNRGL F+ M
Sbjct: 86 KEQEQEQEEFSTTRVLASNVPWNCTTEDIRALFEKFGTVVDVELSMYNKTRNRGLAFVSM 145
Query: 382 ASPEDAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPVPTFNLFVANLAFEAR 561
SPE+AA+A+++L+SYE+EGR LK+ YAK KK+K P P PVPTFNLFVANL F+A+
Sbjct: 146 GSPEEAATAIKSLDSYEFEGRSLKMNYAKLKKEKPLPPL-PPKPVPTFNLFVANLPFDAK 204
Query: 562 AKHLKEFFDADTGNVVSTEVIF--HENPRRSSGYGFVSFKTKKMADAALLEFQGKDFMGR 735
LKEFF ++ ++ S E+++ H+ PR+ SGYGFV+FKTKK ADAAL F K FMGR
Sbjct: 205 DNDLKEFFKSEGADIASAEIVYHNHDKPRKPSGYGFVAFKTKKEADAALSTFADKVFMGR 264
Query: 736 PIRLARSKQFVKLQAKEGLQPPD 804
PIR+ARSKQFV+ +EG Q D
Sbjct: 265 PIRVARSKQFVRQPREEGQQSDD 287
>gi|51968436|dbj|BAD42910.1| putative protein [Arabidopsis thaliana]
Length = 171
Score = 181 bits (457), Expect = 3e-043
Identities = 101/156 (64%), Positives = 116/156 (74%), Gaps = 15/156 (9%)
Frame = +1
Query: 22 PPISLQFLGHQSEHKTPNPGVSLTNFSLPWSTPPSLSRLHLSKPRNLTSCFSATTQEPIL 201
P ++ F H TP+ + + P S P +K RNLTS FS TTQEP+L
Sbjct: 23 PNPNVAFTNHSLSLSTPSLCRLHRHATFPDSIP--------AKSRNLTSYFSTTTQEPVL 74
Query: 202 ESSSSSS-------EEISKTRLIAQNVPWTSTPEDIRSLFEKHGNVVDVEMSMHKKERNR 360
ESSSSSS EEISKTRLIAQNVPWTSTPEDIRSLFEK+G+V+D+EMSMHKKERNR
Sbjct: 75 ESSSSSSSAPEVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNR 134
Query: 361 GLVFIEMASPEDAASALQALESYEYEGRRLKVAYAK 468
GLVFIEMASPE+AA+AL++LES EYEGRRLKV YAK
Sbjct: 135 GLVFIEMASPEEAATALKSLESCEYEGRRLKVDYAK 170
>gi|115476954|ref|NP_001062073.1| Os08g0483200 [Oryza sativa Japonica Group]
Length = 269
Score = 170 bits (429), Expect = 6e-040
Identities = 96/219 (43%), Positives = 134/219 (61%), Gaps = 9/219 (4%)
Frame = +1
Query: 166 SCFSATTQEPILESSSSSSE-EISKTRLIAQNVPWTSTPEDIRSLFEKHGNVVDVEMSMH 342
+C ++ + P E+ + E E +TRLIAQN+PW T +D+R+LF KHG+VVDVE+SM+
Sbjct: 48 ACCASASVAPAAEAEAVVEEPEGPRTRLIAQNIPWDCTADDMRALFGKHGSVVDVELSMY 107
Query: 343 KKERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPVPT 522
RNRGL F+ M S E+A SAL L S R +KV + +++KK+ P P+P
Sbjct: 108 NSTRNRGLAFVTMGSEEEALSALNHLNSTTLNDRTIKVDFTRSRKKQYVVP---SAPMPK 164
Query: 523 FNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFH-ENPRRSSGYGFVSFKTKKMADAA 699
++FV NL + R++HL+E F A T V S EV+FH +PRRS+GYGFVSF +K+ A+AA
Sbjct: 165 HSVFVGNLTWRVRSRHLRELF-ASTPGVQSVEVVFHTTSPRRSAGYGFVSFSSKEAAEAA 223
Query: 700 LLEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPPDEEEL 816
+ F G MGR I + K K P EE+L
Sbjct: 224 ISTFNGTKLMGRSINVMFKDDNAK---KNKSAAPTEEDL 259
>gi|194696360|gb|ACF82264.1| unknown [Zea mays]
Length = 275
Score = 163 bits (411), Expect = 7e-038
Identities = 90/208 (43%), Positives = 126/208 (60%), Gaps = 6/208 (2%)
Frame = +1
Query: 139 HLSKPRNLTSCFSA---TTQEPILESSSSSSEEIS-KTRLIAQNVPWTSTPEDIRSLFEK 306
H S +C +A Q P E+ + + E++ KTRL+AQN+PW T +++R+LFE
Sbjct: 34 HASSRAAFAACAAAPALQVQAPEAEAEAETVEQVGPKTRLVAQNIPWDCTADEMRALFES 93
Query: 307 HGNVVDVEMSMHKKERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKT 486
HG+VV VE+SM+ +NRGL F+ M S E+A +AL L S R++KV +A+ +KK+
Sbjct: 94 HGSVVGVELSMYSANKNRGLAFVTMGSEEEALAALTHLNSTILNDRKIKVDFARPRKKQP 153
Query: 487 YAPREKPTPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFH-ENPRRSSGYGF 663
P + +FV NL + R +HL+E F A VVS EVIFH PRRS+GY F
Sbjct: 154 KQPAVVSDDTEKYVVFVGNLTWRVRNRHLRELF-ASAPGVVSAEVIFHTTTPRRSAGYAF 212
Query: 664 VSFKTKKMADAALLEFQGKDFMGRPIRL 747
VSF +K+ A AA+ F GK MGRPI +
Sbjct: 213 VSFSSKESAGAAISAFNGKILMGRPINV 240
>gi|226492336|ref|NP_001150253.1| ribonucleoprotein [Zea mays]
Length = 275
Score = 163 bits (411), Expect = 7e-038
Identities = 90/208 (43%), Positives = 126/208 (60%), Gaps = 6/208 (2%)
Frame = +1
Query: 139 HLSKPRNLTSCFSA---TTQEPILESSSSSSEEIS-KTRLIAQNVPWTSTPEDIRSLFEK 306
H S +C +A Q P E+ + + E++ KTRL+AQN+PW T +++R+LFE
Sbjct: 34 HASSRAAFAACAAAPALQVQAPEAEAEAETVEQVGPKTRLVAQNIPWDCTADEMRALFES 93
Query: 307 HGNVVDVEMSMHKKERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKT 486
HG+VV VE+SM+ +NRGL F+ M S E+A +AL L S R++KV +A+ +KK+
Sbjct: 94 HGSVVGVELSMYSANKNRGLAFVTMGSEEEALAALTHLNSTILNDRKIKVDFARPRKKQP 153
Query: 487 YAPREKPTPVPTFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFH-ENPRRSSGYGF 663
P + +FV NL + R +HL+E F A VVS EVIFH PRRS+GY F
Sbjct: 154 KQPAVVSDATEKYVVFVGNLTWRVRNRHLRELF-ASAPGVVSAEVIFHTTTPRRSAGYAF 212
Query: 664 VSFKTKKMADAALLEFQGKDFMGRPIRL 747
VSF +K+ A AA+ F GK MGRPI +
Sbjct: 213 VSFSSKESAGAAISAFNGKILMGRPINV 240
>gi|242082447|ref|XP_002445992.1| hypothetical protein SORBIDRAFT_07g029220
[Sorghum bicolor]
Length = 266
Score = 163 bits (410), Expect = 9e-038
Identities = 87/195 (44%), Positives = 123/195 (63%), Gaps = 4/195 (2%)
Frame = +1
Query: 235 KTRLIAQNVPWTSTPEDIRSLFEKHGNVVDVEMSMHKKERNRGLVFIEMASPEDAASALQ 414
+TRL+AQN+PW ST +++R+LF+ HG+VV VE+SM+ +NRGL F+ M S EDA +AL
Sbjct: 71 RTRLVAQNIPWDSTADEMRALFQTHGSVVGVELSMYSASKNRGLAFVTMGSEEDALAALT 130
Query: 415 ALESYEYEGRRLKVAYAKAKKKKTYAPREKPTPVPTFNLFVANLAFEARAKHLKEFFDAD 594
L S R++KV +A+ +KK+ P P+ + +FV NL + R +HL+E F A
Sbjct: 131 HLNSTILNDRKIKVDFARPRKKQPKQPVVVSNPMEKYIVFVGNLTWRVRNRHLRELF-AS 189
Query: 595 TGNVVSTEVIFH-ENPRRSSGYGFVSFKTKKMADAALLEFQGKDFMGRPIRLARSKQFVK 771
V+S EVIFH PRRS+GY FVSF +K+ A+AA+ F GK MGRPI + + K
Sbjct: 190 APGVISAEVIFHTTTPRRSAGYAFVSFSSKETAEAAISAFNGKILMGRPINVMLKDENGK 249
Query: 772 LQAKEGLQPPDEEEL 816
E P +E E+
Sbjct: 250 --KNESSVPKEEAEV 262
>gi|7267548|emb|CAB78029.1| putative protein [Arabidopsis thaliana]
Length = 211
Score = 158 bits (399), Expect = 2e-036
Identities = 89/142 (62%), Positives = 104/142 (73%), Gaps = 15/142 (10%)
Frame = +1
Query: 22 PPISLQFLGHQSEHKTPNPGVSLTNFSLPWSTPPSLSRLHLSKPRNLTSCFSATTQEPIL 201
P ++ F H TP+ + + P S P +K RNLTS FS TTQEP+L
Sbjct: 23 PNPNVAFTNHSLSLSTPSLCRLHRHATFPDSIP--------AKSRNLTSYFSTTTQEPVL 74
Query: 202 ESSSSSS-------EEISKTRLIAQNVPWTSTPEDIRSLFEKHGNVVDVEMSMHKKERNR 360
ESSSSSS EEISKTRLIAQNVPWTSTPEDIRSLFEK+G+V+D+EMSMHKKERNR
Sbjct: 75 ESSSSSSSAPEVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNR 134
Query: 361 GLVFIEMASPEDAASALQALES 426
GLVFIEMASPE+AA+AL++LES
Sbjct: 135 GLVFIEMASPEEAATALKSLES 156
>gi|15226983|ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein
[Arabidopsis thaliana]
Length = 308
Score = 144 bits (362), Expect = 3e-032
Identities = 91/240 (37%), Positives = 136/240 (56%), Gaps = 12/240 (5%)
Frame = +1
Query: 163 TSCFSATTQEPILESSSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKHGNVVDVEMSMH 342
TS T+QE E + +S+ K +L N+PW+ + DI LF + G V +VE+
Sbjct: 73 TSADEETSQEEKTEETQNSN---LKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQ 129
Query: 343 KKERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKT-YAPREKPTPVP 519
K +NRG F+ MAS E+A +A+ ++++ GR + V++A+ KK T +P + P+P P
Sbjct: 130 KDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFARRFKKPTPKSPNDLPSPAP 189
Query: 520 ---TFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMA 690
L+V+NLA++AR+ HL+E F A N VS V+F + RSSGYGFVSF T++ A
Sbjct: 190 GDTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGRSSGYGFVSFATREEA 249
Query: 691 DAALLEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPPDEEELSESET-MTQEDEIPAPEN 867
+ A+ + GK+ MGRPI L +F A E E + SE T ED+ + EN
Sbjct: 250 ENAITKLNGKEIMGRPITL----KFSLRSASESEDGDSVEANNASEDGDTVEDKNTSEEN 305
>gi|297823333|ref|XP_002879549.1| hypothetical protein ARALYDRAFT_482506
[Arabidopsis lyrata subsp. lyrata]
Length = 308
Score = 139 bits (350), Expect = 8e-031
Identities = 83/234 (35%), Positives = 128/234 (54%), Gaps = 14/234 (5%)
Frame = +1
Query: 163 TSCFSATTQEPILESSSSSSEEISKTRLIAQNVPWTSTPEDIRSLFEKHGNVVDVEMSMH 342
TS T+QE E + S+ K +L N+PW+ + DI LF + G V +VE+
Sbjct: 73 TSAEEETSQEEKTEETQKSN---LKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEIIRQ 129
Query: 343 KKERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKT-YAPREKPTPVP 519
K +NRG F+ MAS E+A +A+ ++ + GR + V +A+ KK T P + P+P P
Sbjct: 130 KDGKNRGFAFVTMASGEEAQAAIDKFDTSQVSGRIISVNFARRFKKPTPKPPNDLPSPPP 189
Query: 520 ---TFNLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMA 690
L+V+NLA++AR+ HL+E F A N VS V+F + RSSGYGFVSF T++ A
Sbjct: 190 GDTRHKLYVSNLAWKARSTHLRELFTASDFNPVSARVVFADPEGRSSGYGFVSFATREEA 249
Query: 691 DAALLEFQGKDFMGRPIRLARSKQFVKLQAKEGLQPPDEEELSESETMTQEDEI 852
+ A+ + GK+ MGRPI +K + + D + + ++ T D +
Sbjct: 250 EDAIAKLDGKEIMGRPI-------ILKFSLRSASESEDGDTVGDNNTSEDGDTV 296
>gi|255639879|gb|ACU20232.1| unknown [Glycine max]
Length = 289
Score = 130 bits (325), Expect = 6e-028
Identities = 78/206 (37%), Positives = 119/206 (57%), Gaps = 9/206 (4%)
Frame = +1
Query: 241 RLIAQNVPWTSTPEDIRSLFEKHGNVVDVEMSMHKKERNRGLVFIEMASPEDAASALQAL 420
+L N+ W+ T DI LF + G V DVE+ K R++G F+ MAS E+A +A+
Sbjct: 81 KLYVVNLSWSLTAADINDLFAQSGTVTDVEIIKSKDGRSKGYAFVTMASGEEAQAAVDKF 140
Query: 421 ESYEYEGRRLKVAYAKAKKKKTYAPREKPTPVP---TFNLFVANLAFEARAKHLKEFFDA 591
+SYE GR ++V AK + KK +P P P P ++ +NLA++AR+ HL++ F
Sbjct: 141 DSYELSGRIIRVELAK-RFKKPPSPPPPPGPRPGETRHVIYASNLAWKARSTHLRQLFAE 199
Query: 592 DTGNVVSTEVIFHENPRRSSGYGFVSFKTKKMADAALLEFQGKDFMGRPIRLARSKQFVK 771
+ S V+F RS+GYGFVSF TK+ A+AA+ GK+ MGRP+RL +F +
Sbjct: 200 NFKTPSSARVVFDSPSGRSAGYGFVSFLTKEDAEAAISTVDGKELMGRPLRL----KFSE 255
Query: 772 LQAKEGLQPPDEEELSESETMTQEDE 849
+ K G + DE++ ++ + EDE
Sbjct: 256 KKDKAG-REKDEDQDKDAGSEEDEDE 280
>gi|238010966|gb|ACR36518.1| unknown [Zea mays]
Length = 169
Score = 97 bits (240), Expect = 5e-018
Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 4/123 (3%)
Frame = +1
Query: 139 HLSKPRNLTSCFSA---TTQEPILESSSSSSEEIS-KTRLIAQNVPWTSTPEDIRSLFEK 306
H S +C +A Q P E+ + + E++ KTRL+AQN+PW T +++R+LFE
Sbjct: 34 HASSRAAFAACAAAPALQVQAPEAEAEAETVEQVGPKTRLVAQNIPWDCTADEMRALFES 93
Query: 307 HGNVVDVEMSMHKKERNRGLVFIEMASPEDAASALQALESYEYEGRRLKVAYAKAKKKKT 486
HG+VV VE+SM+ +NRGL F+ M S E+A +AL L S R++KV +A+ +KK+
Sbjct: 94 HGSVVGVELSMYSANKNRGLAFVTMGSEEEALAALTHLNSTILNDRKIKVDFARPRKKQP 153
Query: 487 YAP 495
P
Sbjct: 154 KQP 156
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,992,423,490,450
Number of Sequences: 15229318
Number of Extensions: 1992423490450
Number of Successful Extensions: 533126175
Number of sequences better than 0.0: 0
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