BLASTX 7.6.2
Query= UN16666 /QuerySize=947
(946 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G05100.1 | Symbols: LHCB2.1, LHCB2 | LHCB2.1; ... 537 6e-153
TAIR9_protein||AT2G05070.1 | Symbols: LHCB2.2, LHCB2 | LHCB2.2; ... 533 5e-152
TAIR9_protein||AT3G27690.1 | Symbols: LHCB2.4, LHCB2.3, LHCB2 | ... 529 1e-150
TAIR9_protein||AT2G34420.1 | Symbols: LHB1B2, LHCB1.5 | LHB1B2; ... 419 2e-117
TAIR9_protein||AT1G29910.1 | Symbols: CAB3, AB180, LHCB1.2 | CAB... 416 1e-116
TAIR9_protein||AT1G29920.1 | Symbols: CAB2, AB165, LHCB1.1 | CAB... 416 1e-116
TAIR9_protein||AT1G29930.1 | Symbols: CAB1, AB140, CAB140, LHCB1... 416 1e-116
TAIR9_protein||AT2G34430.1 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; ... 409 2e-114
TAIR9_protein||AT5G54270.1 | Symbols: LHCB3, LHCB3*1 | LHCB3 (LI... 355 4e-098
TAIR9_protein||AT1G76570.1 | Symbols: | chlorophyll A-B binding... 201 5e-052
TAIR9_protein||AT4G10340.1 | Symbols: LHCB5 | LHCB5 (LIGHT HARVE... 201 5e-052
TAIR9_protein||AT3G61470.1 | Symbols: LHCA2 | LHCA2; chlorophyll... 136 3e-032
TAIR9_protein||AT5G01530.1 | Symbols: | chlorophyll A-B binding... 100 2e-021
TAIR9_protein||AT1G61520.1 | Symbols: LHCA3 | LHCA3; chlorophyll... 90 2e-018
TAIR9_protein||AT1G61520.2 | Symbols: LHCA3 | LHCA3; chlorophyll... 90 2e-018
TAIR9_protein||AT1G45474.1 | Symbols: LHCA5 | LHCA5; pigment bin... 81 7e-016
TAIR9_protein||AT1G45474.2 | Symbols: LHCA5 | LHCA5; pigment bin... 81 7e-016
>TAIR9_protein||AT2G05100.1 | Symbols: LHCB2.1, LHCB2 | LHCB2.1; chlorophyll
binding | chr2:1823449-1824331 REVERSE
Length = 266
Score = 537 bits (1381), Expect = 6e-153
Identities = 259/266 (97%), Positives = 262/266 (98%)
Frame = +3
Query: 54 MATSAIQQSSFAGQTALKPSNDLLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 233
MATSAIQQSSFAGQTALKPSN+LLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP
Sbjct: 1 MATSAIQQSSFAGQTALKPSNELLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 60
Query: 234 FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 413
FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK
Sbjct: 61 FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 120
Query: 414 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRIGGGP 593
NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMG IEGYRIGGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGP 180
Query: 594 LGEGLDPLYPGGAFDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 773
LGEGLDPLYPGGAFDPLNLAEDPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
Query: 774 NLFDHLADPVANNAWSFATNFVPGK* 851
NLFDHLADPVANNAWS+ATNFVPG *
Sbjct: 241 NLFDHLADPVANNAWSYATNFVPGN* 266
>TAIR9_protein||AT2G05070.1 | Symbols: LHCB2.2, LHCB2 | LHCB2.2; chlorophyll
binding | chr2:1799436-1800329 REVERSE
Length = 266
Score = 533 bits (1373), Expect = 5e-152
Identities = 257/266 (96%), Positives = 262/266 (98%)
Frame = +3
Query: 54 MATSAIQQSSFAGQTALKPSNDLLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 233
MATSAIQQSSFAGQTALKPS+DL++KVGV GGGRVTMRRTVKSTPQSIWYGPDRPKYLGP
Sbjct: 1 MATSAIQQSSFAGQTALKPSSDLIQKVGVLGGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 60
Query: 234 FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 413
FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK
Sbjct: 61 FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 120
Query: 414 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRIGGGP 593
NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMG IEGYRIGGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGP 180
Query: 594 LGEGLDPLYPGGAFDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 773
LGEGLDPLYPGGAFDPLNLAEDPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
Query: 774 NLFDHLADPVANNAWSFATNFVPGK* 851
NLFDHLADPVANNAWS+ATNFVPGK*
Sbjct: 241 NLFDHLADPVANNAWSYATNFVPGK* 266
>TAIR9_protein||AT3G27690.1 | Symbols: LHCB2.4, LHCB2.3, LHCB2 | LHCB2.3;
chlorophyll binding | chr3:10256002-10256921 FORWARD
Length = 267
Score = 529 bits (1362), Expect = 1e-150
Identities = 254/267 (95%), Positives = 260/267 (97%), Gaps = 1/267 (0%)
Frame = +3
Query: 54 MATSAIQQSSFAGQTALKPSNDLLRKVGVS-GGGRVTMRRTVKSTPQSIWYGPDRPKYLG 230
MATSAIQ SSFAGQT LKPSNDLLRK+G S GGGR+ MRRTVKSTPQSIWYGPDRPKYLG
Sbjct: 1 MATSAIQHSSFAGQTTLKPSNDLLRKIGASNGGGRIIMRRTVKSTPQSIWYGPDRPKYLG 60
Query: 231 PFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILS 410
PFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILS
Sbjct: 61 PFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILS 120
Query: 411 KNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRIGGG 590
KNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMG IEGYRIGGG
Sbjct: 121 KNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRIGGG 180
Query: 591 PLGEGLDPLYPGGAFDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 770
PLGEGLDPLYPGGAFDPLNLAEDPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI
Sbjct: 181 PLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 240
Query: 771 ENLFDHLADPVANNAWSFATNFVPGK* 851
ENLFDH+ADPVANNAW++ATNFVPGK*
Sbjct: 241 ENLFDHIADPVANNAWAYATNFVPGK* 267
>TAIR9_protein||AT2G34420.1 | Symbols: LHB1B2, LHCB1.5 | LHB1B2; chlorophyll
binding | chr2:14522716-14523513 REVERSE
Length = 266
Score = 419 bits (1075), Expect = 2e-117
Identities = 205/269 (76%), Positives = 227/269 (84%), Gaps = 10/269 (3%)
Frame = +3
Query: 57 ATSAIQQSSFAGQTALKPSNDLLRKVGVSGGGRVTMRRTV---KSTPQSIWYGPDRPKYL 227
+T A+ +FAG+ ++D+L G GRVTMR+TV K S WYG DR KYL
Sbjct: 4 STMALSSPAFAGKAVKPAASDVL------GSGRVTMRKTVAKPKGPSGSPWYGSDRVKYL 57
Query: 228 GPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEIL 407
GPFS PSYLTGE+PGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGC FPE+L
Sbjct: 58 GPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPELL 117
Query: 408 SKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRIGG 587
++NGVKFGEAVWFKAGSQIFS+GGLDYLGNP+L+HAQSILAIWA QV+LMG +EGYR+ G
Sbjct: 118 ARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVAG 177
Query: 588 -GPLGEGLDPLYPGGAFDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 764
GPLGE D LYPGG+FDPL LA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 178 DGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 765 PIENLFDHLADPVANNAWSFATNFVPGK* 851
P+ENL DHLADPV NNAW+FATNFVPGK*
Sbjct: 238 PLENLADHLADPVNNNAWAFATNFVPGK* 266
>TAIR9_protein||AT1G29910.1 | Symbols: CAB3, AB180, LHCB1.2 | CAB3 (CHLOROPHYLL
A/B BINDING PROTEIN 3); chlorophyll binding | chr1:10472443-10473246
REVERSE
Length = 268
Score = 416 bits (1069), Expect = 1e-116
Identities = 207/270 (76%), Positives = 227/270 (84%), Gaps = 10/270 (3%)
Frame = +3
Query: 57 ATSAIQQSSFAGQTA-LKPSNDLLRKVGVSGGGRVTMRRTV---KSTPQSIWYGPDRPKY 224
+T A+ +FAG+ L P+ V G GRVTMR+TV K S WYG DR KY
Sbjct: 4 STMALSSPAFAGKAVNLSPAAS-----EVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKY 58
Query: 225 LGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEI 404
LGPFS +PSYLTGE+PGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGC FPE+
Sbjct: 59 LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 118
Query: 405 LSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRI- 581
L++NGVKFGEAVWFKAGSQIFS+GGLDYLGNP+L+HAQSILAIWA QV+LMG +EGYR+
Sbjct: 119 LARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 178
Query: 582 GGGPLGEGLDPLYPGGAFDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 761
G GPLGE D LYPGG+FDPL LA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 179 GNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 238
Query: 762 GPIENLFDHLADPVANNAWSFATNFVPGK* 851
GPIENL DHLADPV NNAW+FATNFVPGK*
Sbjct: 239 GPIENLADHLADPVNNNAWAFATNFVPGK* 268
>TAIR9_protein||AT1G29920.1 | Symbols: CAB2, AB165, LHCB1.1 | CAB2 (CHLOROPHYLL
A/B-BINDING PROTEIN 2); chlorophyll binding | chr1:10475089-10475892
REVERSE
Length = 268
Score = 416 bits (1069), Expect = 1e-116
Identities = 207/270 (76%), Positives = 227/270 (84%), Gaps = 10/270 (3%)
Frame = +3
Query: 57 ATSAIQQSSFAGQTA-LKPSNDLLRKVGVSGGGRVTMRRTV---KSTPQSIWYGPDRPKY 224
+T A+ +FAG+ L P+ V G GRVTMR+TV K S WYG DR KY
Sbjct: 4 STMALSSPAFAGKAVNLSPAAS-----EVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKY 58
Query: 225 LGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEI 404
LGPFS +PSYLTGE+PGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGC FPE+
Sbjct: 59 LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 118
Query: 405 LSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRI- 581
L++NGVKFGEAVWFKAGSQIFS+GGLDYLGNP+L+HAQSILAIWA QV+LMG +EGYR+
Sbjct: 119 LARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 178
Query: 582 GGGPLGEGLDPLYPGGAFDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 761
G GPLGE D LYPGG+FDPL LA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 179 GNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 238
Query: 762 GPIENLFDHLADPVANNAWSFATNFVPGK* 851
GPIENL DHLADPV NNAW+FATNFVPGK*
Sbjct: 239 GPIENLADHLADPVNNNAWAFATNFVPGK* 268
>TAIR9_protein||AT1G29930.1 | Symbols: CAB1, AB140, CAB140, LHCB1.3 | CAB1
(CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding |
chr1:10478071-10478874 FORWARD
Length = 268
Score = 416 bits (1069), Expect = 1e-116
Identities = 207/270 (76%), Positives = 227/270 (84%), Gaps = 10/270 (3%)
Frame = +3
Query: 57 ATSAIQQSSFAGQTA-LKPSNDLLRKVGVSGGGRVTMRRTV---KSTPQSIWYGPDRPKY 224
+T A+ +FAG+ L P+ V G GRVTMR+TV K S WYG DR KY
Sbjct: 4 STMALSSPAFAGKAVKLSPAAS-----EVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKY 58
Query: 225 LGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEI 404
LGPFS +PSYLTGE+PGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGC FPE+
Sbjct: 59 LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 118
Query: 405 LSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRI- 581
L++NGVKFGEAVWFKAGSQIFS+GGLDYLGNP+L+HAQSILAIWA QV+LMG +EGYR+
Sbjct: 119 LARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 178
Query: 582 GGGPLGEGLDPLYPGGAFDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 761
G GPLGE D LYPGG+FDPL LA DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 179 GNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 238
Query: 762 GPIENLFDHLADPVANNAWSFATNFVPGK* 851
GPIENL DHLADPV NNAW+FATNFVPGK*
Sbjct: 239 GPIENLADHLADPVNNNAWAFATNFVPGK* 268
>TAIR9_protein||AT2G34430.1 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; chlorophyll
binding | chr2:14524818-14525618 FORWARD
Length = 267
Score = 409 bits (1049), Expect = 2e-114
Identities = 197/241 (81%), Positives = 213/241 (88%), Gaps = 3/241 (1%)
Frame = +3
Query: 138 VSGGGRVTMRRTVKST--PQSIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSA 311
V G GR+TMR+ K T S WYG DR KYLGPFS PSYLTGE+PGDYGWDTAGLSA
Sbjct: 27 VFGTGRITMRKASKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSA 86
Query: 312 DPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYL 491
DPETFA+NRELEVIHSRWAMLGALGC FPE+L++NGVKFGEAVWFKAGSQIFS+GGLDYL
Sbjct: 87 DPETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYL 146
Query: 492 GNPNLIHAQSILAIWACQVVLMGLIEGYRIGG-GPLGEGLDPLYPGGAFDPLNLAEDPEA 668
GNP+L+HAQSILAIWA QV+LMG +EGYR+ G GPLGE D LYPGG+FDPL LA DPEA
Sbjct: 147 GNPSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEA 206
Query: 669 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPVANNAWSFATNFVPGK 848
FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DHLADPV NNAW+FATNFVPGK
Sbjct: 207 FAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK 266
Query: 849 * 851
*
Sbjct: 267 * 267
>TAIR9_protein||AT5G54270.1 | Symbols: LHCB3, LHCB3*1 | LHCB3 (LIGHT-HARVESTING
CHLOROPHYLL B-BINDING PROTEIN 3); structural molecule |
chr5:22038424-22039383 FORWARD
Length = 266
Score = 355 bits (909), Expect = 4e-098
Identities = 184/266 (69%), Positives = 204/266 (76%), Gaps = 12/266 (4%)
Frame = +3
Query: 57 ATSAIQQSSFAGQTALKPSNDLLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPF 236
++S + ++F GQT N LR V G + TM +WYGPDR KYLGPF
Sbjct: 8 SSSVLTPTTFLGQTKASSFNP-LRDVVSLGSPKYTM-------GNDLWYGPDRVKYLGPF 59
Query: 237 SENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK- 413
S TPSYLTGE+PGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGA GC PE+L K
Sbjct: 60 SVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLQKW 119
Query: 414 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGLIEGYRIGG-G 590
V F E VWFKAGSQIFSEGGLDYLGNPNL+HAQSILA+ QV+LMGL+EG+RI G
Sbjct: 120 VRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGLD 179
Query: 591 PLGEGLDPLYPGGA-FDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGP 767
+GEG D LYPGG FDPL LA+DP FAELKVKE+KNGRLAMFSMFGFFVQAIVTGKGP
Sbjct: 180 GVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGP 238
Query: 768 IENLFDHLADPVANNAWSFATNFVPG 845
+ENL DHL +PVANNAW+FAT F PG
Sbjct: 239 LENLLDHLDNPVANNAWAFATKFAPG 264
>TAIR9_protein||AT1G76570.1 | Symbols: | chlorophyll A-B binding family protein
| chr1:28729132-28730754 FORWARD
Length = 328
Score = 201 bits (511), Expect = 5e-052
Identities = 119/262 (45%), Positives = 152/262 (58%), Gaps = 13/262 (4%)
Frame = +3
Query: 57 ATSAIQQSSFAGQTALKPSNDLLRKVGVSGGGRVTMRRTVKSTPQSIWYGPDRPKYLGPF 236
A AI SS +L+ + +K V R + ++ S WYG +RP++ GP
Sbjct: 62 AVKAIANSSIG--VSLRRRLEEKKKEAVENSSRF-KSKAQEARNDSKWYGKERPRWFGPI 118
Query: 237 SENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKN 416
+ P YLTGE PGDYG+D AGL D TF K E++H+RWAML ALG PE+
Sbjct: 119 PYDYPPYLTGELPGDYGFDIAGLGKDRLTFDKYFNFEILHARWAMLAALGALIPEVFDLT 178
Query: 417 GV-KFGEAVWFKAGSQIFSEGGLDYLGNPNL--IHAQSILAIWACQVVLMGLIEGYRIGG 587
G F E VW++ G L+YLG P L +Q ++ I CQV+LM E R G
Sbjct: 179 GTFHFAEPVWWRVGYSKLQGETLEYLGIPGLHVAGSQGVIVIAICQVLLMVGPEYARYCG 238
Query: 588 ----GPLGEGL--DPLYPGGA-FDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQA 746
PLG L D YPGG FDPLNL+EDP AF +LKVKE+KNGRLAM + GF+ QA
Sbjct: 239 IEALEPLGIYLPGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIKNGRLAMVAWLGFYAQA 298
Query: 747 IVTGKGPIENLFDHLADPVANN 812
TGKGP++NL DH++DP+ NN
Sbjct: 299 AFTGKGPVQNLVDHVSDPLHNN 320
>TAIR9_protein||AT4G10340.1 | Symbols: LHCB5 | LHCB5 (LIGHT HARVESTING COMPLEX
OF PHOTOSYSTEM II 5); chlorophyll binding | chr4:6408200-6409496
FORWARD
Length = 281
Score = 201 bits (511), Expect = 5e-052
Identities = 113/209 (54%), Positives = 134/209 (64%), Gaps = 9/209 (4%)
Frame = +3
Query: 198 WYGPDRPKYLGP---FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 368
WYGPDR +L P YL GE GDYG+D GL PE FAK + E+IH+RWA
Sbjct: 62 WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWA 121
Query: 369 MLGALGCTFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQ 545
MLGA G PE L+K G G EAVWFK G+ + L+Y G I +LA+ A +
Sbjct: 122 MLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAVVA-E 178
Query: 546 VVLMGLIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFAELKVKELKNGRLAMFSM 725
VVL+G E YRI G E D L+PGG FDPL LA+DPE A LKVKE+KNGRLAMF+M
Sbjct: 179 VVLLGGAEYYRITNGLDFE--DKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAM 236
Query: 726 FGFFVQAIVTGKGPIENLFDHLADPVANN 812
GFF+QA VTG+GP+ENL HL+DP NN
Sbjct: 237 LGFFIQAYVTGEGPVENLAKHLSDPFGNN 265
>TAIR9_protein||AT3G61470.1 | Symbols: LHCA2 | LHCA2; chlorophyll binding |
chr3:22745736-22747032 FORWARD
Length = 258
Score = 136 bits (341), Expect = 3e-032
Identities = 91/254 (35%), Positives = 123/254 (48%), Gaps = 30/254 (11%)
Frame = +3
Query: 66 AIQQSSFAGQTALKPSNDLLRKVGVSGGGR--VTMRRTVKSTPQSIWYGPDRPKYLGPFS 239
AI SF G L+ L +K+ V R ++R + IW+ P
Sbjct: 13 AISSPSFLGGKKLR----LKKKLTVPAVSRPDASVRAVAADPDRPIWFPGSTP------- 61
Query: 240 ENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSKNG 419
P +L G PGD+G+D GLS+DP++ N + E++H RWAMLGA G PE L+K G
Sbjct: 62 ---PEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAGIFIPEFLTKIG 118
Query: 420 VKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA-----CQVVLMGLIEGYRIG 584
+ W+ AG Q + + L + IL WA ++ G + +
Sbjct: 119 I-LNTPSWYTAGEQEY------FTDKTTLFVVELILIGWAEGRRWADIIKPGSVNTDPVF 171
Query: 585 GGPLGEGLDPLYPGGA-FDPLNLAE-DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTG 758
G D YPGG FDPL P EL+ KE+KNGRLAM ++ G + Q I TG
Sbjct: 172 PNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAVMGAWFQHIYTG 231
Query: 759 KGPIENLFDHLADP 800
GPI+NLF HLADP
Sbjct: 232 TGPIDNLFAHLADP 245
>TAIR9_protein||AT5G01530.1 | Symbols: | chlorophyll A-B binding protein CP29
(LHCB4) | chr5:209084-210243 FORWARD
Length = 291
Score = 100 bits (247), Expect = 2e-021
Identities = 70/160 (43%), Positives = 88/160 (55%), Gaps = 21/160 (13%)
Frame = +3
Query: 336 RELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHA 515
RE E+IH RWAML LG E L+ GV W AG +G YLG P
Sbjct: 137 RECELIHGRWAMLATLGALSVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFSI 188
Query: 516 QSILAIWACQVVLMGLIEGYRIGGGPLGEGLDP---LYPGGA-FDPLNLAEDPEAFAELK 683
++ IW +V+++G IE R LD LYPGG FDPL LA DPE A+L+
Sbjct: 189 STL--IW-IEVLVIGYIEFQR------NAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQ 239
Query: 684 VKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHLADPV 803
+ E+K+ RLAM + GF VQA TGKGP+ N HL+DP+
Sbjct: 240 LAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 279
>TAIR9_protein||AT1G61520.1 | Symbols: LHCA3 | LHCA3; chlorophyll binding |
chr1:22700152-22701149 FORWARD
Length = 274
Score = 90 bits (221), Expect = 2e-018
Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Frame = +3
Query: 588 GPLGEGLDPLYPGGA-FDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 764
G G G +P YPGG F+PL +D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG G
Sbjct: 191 GLAGSG-NPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVG 249
Query: 765 PIENLFDHLADPVANN 812
P +NL DHLADPV NN
Sbjct: 250 PYQNLLDHLADPVNNN 265
>TAIR9_protein||AT1G61520.2 | Symbols: LHCA3 | LHCA3; chlorophyll binding |
chr1:22700493-22701149 FORWARD
Length = 219
Score = 90 bits (221), Expect = 2e-018
Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Frame = +3
Query: 588 GPLGEGLDPLYPGGA-FDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKG 764
G G G +P YPGG F+PL +D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG G
Sbjct: 136 GLAGSG-NPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVG 194
Query: 765 PIENLFDHLADPVANN 812
P +NL DHLADPV NN
Sbjct: 195 PYQNLLDHLADPVNNN 210
>TAIR9_protein||AT1G45474.1 | Symbols: LHCA5 | LHCA5; pigment binding |
chr1:17179353-17180439 FORWARD
Length = 257
Score = 81 bits (199), Expect = 7e-016
Identities = 40/68 (58%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = +3
Query: 600 EGLDPLYPGG-AFDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 776
EGL+P YPGG +PL LA+D + + K+KE+KNGRLAM +M GFFVQA VT GPI+N
Sbjct: 175 EGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDN 234
Query: 777 LFDHLADP 800
L +HL++P
Sbjct: 235 LVEHLSNP 242
>TAIR9_protein||AT1G45474.2 | Symbols: LHCA5 | LHCA5; pigment binding |
chr1:17179353-17180439 FORWARD
Length = 257
Score = 81 bits (199), Expect = 7e-016
Identities = 40/68 (58%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = +3
Query: 600 EGLDPLYPGG-AFDPLNLAEDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 776
EGL+P YPGG +PL LA+D + + K+KE+KNGRLAM +M GFFVQA VT GPI+N
Sbjct: 175 EGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDN 234
Query: 777 LFDHLADP 800
L +HL++P
Sbjct: 235 LVEHLSNP 242
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,869,690,853
Number of Sequences: 33410
Number of Extensions: 8869690853
Number of Successful Extensions: 311758351
Number of sequences better than 0.0: 0
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