BLASTX 7.6.2
Query= UN16692 /QuerySize=750
(749 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G21620.1 | Symbols: | glycine-rich protein | ... 256 1e-068
TAIR9_protein||AT1G61255.1 | Symbols: | FUNCTIONS IN: molecular... 108 4e-024
TAIR9_protein||AT2G19000.1 | Symbols: | FUNCTIONS IN: molecular... 72 3e-013
TAIR9_protein||AT2G36120.1 | Symbols: DOT1 | DOT1 (DEFECTIVELY O... 57 1e-008
TAIR9_protein||AT3G23450.1 | Symbols: | unknown protein | chr3:... 55 4e-008
TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine... 52 3e-007
TAIR9_protein||AT5G40490.1 | Symbols: | RNA recognition motif (... 51 8e-007
TAIR9_protein||AT2G05540.1 | Symbols: | glycine-rich protein | ... 50 1e-006
TAIR9_protein||AT2G32690.1 | Symbols: ATGRP23, GRP23 | GRP23 (GL... 50 1e-006
>TAIR9_protein||AT4G21620.1 | Symbols: | glycine-rich protein |
chr4:11491519-11491914 FORWARD
Length = 132
Score = 256 bits (653), Expect = 1e-068
Identities = 116/132 (87%), Positives = 124/132 (93%), Gaps = 2/132 (1%)
Frame = -2
Query: 715 TKPILVASLLLIIFVSATHSARQKSGNNGLGFAGVPGSGYAGIPGFGNGFPGTGVGGGYG 536
TK IL+ASLL+II VSAT SARQKSGN+GLGF GVPGSG+ IPGFGNGFPGTGVGGGYG
Sbjct: 3 TKSILLASLLIIILVSATESARQKSGNDGLGFGGVPGSGF--IPGFGNGFPGTGVGGGYG 60
Query: 535 GGYGGPSGGYGKGGVVRPTVTCKEKGPCNGKKLRCPARCFSSFSRSGKGYGGGGGGGGCT 356
GG+GGPSGG+GKGGVVRPTVTCKEKGPCNGKKLRCPA+CF SFSRSGKGYGGGGGGGGCT
Sbjct: 61 GGFGGPSGGFGKGGVVRPTVTCKEKGPCNGKKLRCPAKCFKSFSRSGKGYGGGGGGGGCT 120
Query: 355 MDCKKKCVAYC* 320
MDCKKKC+AYC*
Sbjct: 121 MDCKKKCIAYC* 132
>TAIR9_protein||AT1G61255.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
glycine-rich protein (TAIR:AT4G21620.1); Has 45 Blast hits to 45
proteins in 7 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi -
0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr1:22589260-22589691 REVERSE
Length = 144
Score = 108 bits (269), Expect = 4e-024
Identities = 59/97 (60%), Positives = 62/97 (63%), Gaps = 7/97 (7%)
Frame = -2
Query: 607 GSGYAGIPGFGNGFPGTGV---GGGYGGGYGGPSGGYGKGGVVRPTVTCKEKGPCNGKKL 437
G G G PG P TG G G GG Y SGGY KG VR TV C+EKG C KKL
Sbjct: 50 GYGSGGYPGLTTE-PATGFILPGSGPGGSYSELSGGYSKGRGVRLTVMCEEKGHCYMKKL 108
Query: 436 RCPARCFSSFSRSGKGYGGGGGGGGCTMDCKKKCVAY 326
CPA+CF S SR GKGY GGGGGGCT+DC KKCVAY
Sbjct: 109 TCPAKCFKSLSRKGKGY--GGGGGGCTIDC-KKCVAY 142
>TAIR9_protein||AT2G19000.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED
DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C
globular stage, petal differentiation and expansion stage; BEST
Arabidopsis thaliana protein match is: glycine-rich protein
(TAIR:AT4G21620.1); Has 49 Blast hits to 49 proteins in 7 species:
Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 47; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr2:8241189-8241566
FORWARD
Length = 126
Score = 72 bits (175), Expect = 3e-013
Identities = 35/87 (40%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = -2
Query: 583 GFGNGFPGTGVGGGYGGGYGGPSGGYGKGGVVRPTVTCKEKGPCNGKKLRCPARCFSSFS 404
GF +GF G G GG GG G +G TC +G C+GKKL CP C+ S +
Sbjct: 40 GFHHGFSGF---SGSSGGAGGAGGSFGDMMNAGGAHTCSAQGACSGKKLTCPEECYKSTN 96
Query: 403 RSGKGYGGGGGGGGCTMDCKKKCVAYC 323
+ GY GGC+ DC KC A C
Sbjct: 97 VNKDGYKSTSRSGGCSFDCTTKCAATC 123
>TAIR9_protein||AT2G36120.1 | Symbols: DOT1 | DOT1 (DEFECTIVELY ORGANIZED
TRIBUTARIES 1) | chr2:15165468-15166235 FORWARD
Length = 256
Score = 57 bits (135), Expect = 1e-008
Identities = 39/99 (39%), Positives = 44/99 (44%), Gaps = 14/99 (14%)
Frame = -2
Query: 643 SGNNGLGFAGVP--GSGYAGIPGFGNGFPGTG---VGGGYGGGYGGPSGGYGKGGVVRPT 479
S G+G G P GSGY G G G G G G +GGG GGG+GG +GG G GG
Sbjct: 45 SAGLGVGIGGGPGGGSGYGGGSGEGGGAGGHGEGHIGGGGGGGHGGGAGGGGGGG----- 99
Query: 478 VTCKEKGPCNGKKLRCPARCFSSFSRSGKGYGGGGGGGG 362
G G + G G GGGGG GG
Sbjct: 100 ----PGGGYGGGSGEGGGAGYGGGEAGGHGGGGGGGAGG 134
Score = 55 bits (131), Expect = 4e-008
Identities = 37/95 (38%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Frame = -2
Query: 643 SGNNGLGFAGVPGSGYAGIPGFG-NGFPGTGVGGGYGGGYGGPSGGYGKGGVVRPTVTCK 467
+G G G G G GY G G G G G G GG+GGG GG +GG G GG
Sbjct: 132 AGGGGGGGGGAHGGGYGGGQGAGAGGGYGGGGAGGHGGGGGGGNGGGGGGG-------SG 184
Query: 466 EKGPCNGKKLRCPARCFSSFSRSGKGYGGGGGGGG 362
E G G + + +G+GYGGG G GG
Sbjct: 185 EGGAHGGG--------YGAGGGAGEGYGGGAGAGG 211
Score = 51 bits (121), Expect = 6e-007
Identities = 39/94 (41%), Gaps = 13/94 (13%)
Frame = -2
Query: 640 GNNGLGFAGVPGSGYAGIPGFGNGFPGTGVGGGYGGGYGGP-SGGYGKGGVVRPTVTCKE 464
G G G G G G AG G G G G G GGG G G GG GGYG GG
Sbjct: 149 GGQGAGAGGGYGGGGAGGHG-GGGGGGNGGGGGGGSGEGGAHGGGYGAGG---------- 197
Query: 463 KGPCNGKKLRCPARCFSSFSRSGKGYGGGGGGGG 362
G G A G G GGGGGGGG
Sbjct: 198 -GAGEGYGGGAGAGGHGGGGGGGGGSGGGGGGGG 230
Score = 48 bits (113), Expect = 5e-006
Identities = 34/94 (36%), Positives = 37/94 (39%), Gaps = 11/94 (11%)
Frame = -2
Query: 631 GLGFAGVPGSGYAGIPGFGNGFPGTGVGGGYGGGYG-----GPSGGYGKGGVVRPTVTCK 467
G G+ G G+ G G G G G G GG +GGGYG G GGYG GG
Sbjct: 113 GAGYGGGEAGGHGGGGGGGAGGGGGGGGGAHGGGYGGGQGAGAGGGYGGGG------AGG 166
Query: 466 EKGPCNGKKLRCPARCFSSFSRSGKGYGGGGGGG 365
G G G GYG GGG G
Sbjct: 167 HGGGGGGGNGGGGGGGSGEGGAHGGGYGAGGGAG 200
>TAIR9_protein||AT3G23450.1 | Symbols: | unknown protein | chr3:8410483-8411841
FORWARD
Length = 453
Score = 55 bits (131), Expect = 4e-008
Identities = 39/94 (41%), Positives = 46/94 (48%), Gaps = 6/94 (6%)
Frame = -2
Query: 640 GNNGLGFAGVPGSGYAGIPGFGNGFPGTGVGGGYGGGY-GGPSGGYGKGGVVRPTVTCKE 464
G G G G G G+ G GFG G G GVGGG GGG+ GG GG+GKGG + +
Sbjct: 80 GGGGGGGGGGGGGGFGGGGGFGGGH-GGGVGGGVGGGHGGGVGGGFGKGGGIGGGI---G 135
Query: 463 KGPCNGKKLRCPARCFSSFSRSGKGYGGGGGGGG 362
KG G + + G G GGG G GG
Sbjct: 136 KGGGVGGGIGKGGGIGGGIGKGG-GVGGGIGKGG 168
>TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine-rich
RNA-binding protein 3); ATP binding / RNA binding |
chr5:24560870-24562152 FORWARD
Length = 310
Score = 52 bits (123), Expect = 3e-007
Identities = 38/99 (38%), Positives = 41/99 (41%), Gaps = 12/99 (12%)
Frame = -2
Query: 652 RQKSGNNGLGFAGVPGSGYAGIPGFGNGFPGTGVGGGYG---GGYGGPSGGYGKGGVVRP 482
R G G G G G GY G G+G G G G GGYG GGYGG SGG G GG
Sbjct: 119 RTSGGGFGGGGYGGGGGGYGGSGGYGGGAGGYGGSGGYGGGAGGYGGNSGG-GYGGNAAG 177
Query: 481 TVTCKEKGPCNGKKLRCPARCFSSFSRSGKGYGGGGGGG 365
G G + +G GYG GG G
Sbjct: 178 GYGGSGAGGYGGDA--------TGHGGAGGGYGSSGGFG 208
>TAIR9_protein||AT5G40490.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr5:16225483-16227423 FORWARD
Length = 424
Score = 51 bits (120), Expect = 8e-007
Identities = 37/95 (38%), Positives = 41/95 (43%), Gaps = 17/95 (17%)
Frame = -2
Query: 625 GFAGVPGSGYAGIPG-FGNGFPGTGVGGGYGGGYGGP-------SGGYGKGGVVRPTVTC 470
G G PG GY G G +G G+ +G+ GGYGGG GG GGY GGV
Sbjct: 329 GSYGEPGGGYGGPSGSYGGGYGSSGI-GGYGGGMGGAGGGGYRGGGGYDMGGV------- 380
Query: 469 KEKGPCNGKKLRCPARCFSSFSRSGKGYGGGGGGG 365
G G SF G G GG GGGG
Sbjct: 381 -GGGGAGGYGAGGGGNGGGSFYGGGGGRGGYGGGG 414
>TAIR9_protein||AT2G05540.1 | Symbols: | glycine-rich protein |
chr2:2033265-2033978 FORWARD
Length = 136
Score = 50 bits (118), Expect = 1e-006
Identities = 35/91 (38%), Positives = 43/91 (47%), Gaps = 20/91 (21%)
Frame = -2
Query: 706 ILVASLLLIIFVS--------ATHSARQKSGNNG-----LGFAGVPGSGYAGIPGFG-NG 569
+L SL++++ ++ A SA QK+ F G PG GY G PG G G
Sbjct: 6 LLFLSLIVVLLIASEVVARDLAEKSAEQKNNERDEVKQTEQFGGFPGGGYGGFPGGGYGG 65
Query: 568 FPGTGV---GGGY---GGGYGGPSGGYGKGG 494
PG G GGGY GGYG GGYG G
Sbjct: 66 NPGGGYGNRGGGYRNRDGGYGNRGGGYGNRG 96
>TAIR9_protein||AT2G32690.1 | Symbols: ATGRP23, GRP23 | GRP23 (GLYCINE-RICH
PROTEIN 23) | chr2:13863934-13864539 REVERSE
Length = 202
Score = 50 bits (118), Expect = 1e-006
Identities = 35/92 (38%), Positives = 37/92 (40%), Gaps = 32/92 (34%)
Frame = -2
Query: 640 GNNGLGFAGVPGSGYAGIPGFGNGFPGTGVGGGYGGGYGGPSGGYGKGGVVRPTVTCKEK 461
G +GLG G G G G G G G G G GGGYGGG GG GG G G
Sbjct: 113 GGSGLGGGGGLGGGGGGGLGGGGGL-GGGAGGGYGGGAGGGLGGGGGIG----------- 160
Query: 460 GPCNGKKLRCPARCFSSFSRSGKGYGGGGGGG 365
G G+GGGGGGG
Sbjct: 161 --------------------GGGGFGGGGGGG 172
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,869,690,853
Number of Sequences: 33410
Number of Extensions: 8869690853
Number of Successful Extensions: 311758351
Number of sequences better than 0.0: 0
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