BLASTX 7.6.2

Query= UN16873 /QuerySize=1429
        (1428 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G05055.1 | Symbols: ATGTF2H2, GTF2H2 | GTF2H2 ...    455   4e-128

>TAIR9_protein||AT1G05055.1 | Symbols: ATGTF2H2, GTF2H2 | GTF2H2 (GENERAL
        TRANSCRIPTION FACTOR IIH 2); general RNA polymerase II transcription
        factor | chr1:1448913-1450852 REVERSE

          Length = 422

 Score =  455 bits (1169), Expect = 4e-128
 Identities = 229/248 (92%), Positives = 235/248 (94%), Gaps = 2/248 (0%)
 Frame = +2

Query:  17 MSNQRKRPNGGEREEDDEEDDAEGIGQWERAYVDDRSWEALQEDESGLLRPIDTSAIYHA 196
           MSNQRKR N    EEDDE  DAEGIG+WERAYVDDRSWE LQEDESGLLRPID SAIYHA
Sbjct:   1 MSNQRKRSNDEREEEDDE--DAEGIGEWERAYVDDRSWEELQEDESGLLRPIDNSAIYHA 58

Query: 197 QYRRRLRMLSAAAAGTRIQKGLIRYLYIVIDFSRAAAETDFRPSRMAIMAKHVEAFIREF 376
           QYRRRLRMLSAAAAGTRIQKGLIRYLYIVIDFSRAAAE DFRPSRMAIMAKHVEAFIREF
Sbjct:  59 QYRRRLRMLSAAAAGTRIQKGLIRYLYIVIDFSRAAAEMDFRPSRMAIMAKHVEAFIREF 118

Query: 377 FDQNPLSQIGLVSIKNGIAHTLTDLGGSPESHIQALMGKLEAAGDSSLQNALELVHEHLN 556
           FDQNPLSQIGLVSIKNG+AHTLTDLGGSPE+HI+ALMGKLEA GDSSLQNALELVHEHLN
Sbjct: 119 FDQNPLSQIGLVSIKNGVAHTLTDLGGSPETHIKALMGKLEALGDSSLQNALELVHEHLN 178

Query: 557 QIPSYGHREVLILYSALSTSDPGDIMETIQKCKKSRLRCSVIGLSAEMFICKHLCQETGG 736
           Q+PSYGHREVLILYSAL T DPGDIMETIQKCKKS+LRCSVIGLSAEMFICKHLCQETGG
Sbjct: 179 QVPSYGHREVLILYSALCTCDPGDIMETIQKCKKSKLRCSVIGLSAEMFICKHLCQETGG 238

Query: 737 LYSVAVDE 760
           LYSVAVDE
Sbjct: 239 LYSVAVDE 246


 Score =  361 bits (924), Expect = 1e-099
 Identities = 165/176 (93%), Positives = 169/176 (96%)
 Frame = +1

Query:  760 VHLKDLLLEHAPPPPAIAEFAISNLIKMGFPQRAAEGSMVICSCHKEVKIGAGYTCPRCK 939
            VHLKDLLLEHAPPPPAIAEFAI+NLIKMGFPQRAAEGSM ICSCHKEVKIGAGY CPRCK
Sbjct:  247 VHLKDLLLEHAPPPPAIAEFAIANLIKMGFPQRAAEGSMAICSCHKEVKIGAGYMCPRCK 306

Query:  940 ARVCELPTECTICGLTLVSSPHLARSYHHLFPIAPFDEVPILTSSNDPRRKLGKSCFGCQ 1119
            ARVC+LPTECTICGLTLVSSPHLARSYHHLFPIAPFDEVP L+S ND RRKLGKSCFGCQ
Sbjct:  307 ARVCDLPTECTICGLTLVSSPHLARSYHHLFPIAPFDEVPALSSLNDNRRKLGKSCFGCQ 366

Query: 1120 QSLLGAGNKPGPCVTCRKCKHYFCLDCDIYIHESLHNCPGCESIHRPKSVSLMEE* 1287
            QSL+GAGNKP PCVTCRKCKHYFCLDCDIYIHESLHNCPGCESIHRPKSVSLMEE*
Sbjct:  367 QSLIGAGNKPVPCVTCRKCKHYFCLDCDIYIHESLHNCPGCESIHRPKSVSLMEE* 422

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,912,870,024
Number of Sequences: 33410
Number of Extensions: 8912870024
Number of Successful Extensions: 311814745
Number of sequences better than 0.0: 0